prot_Ecto-sp13_S_contig16250.4536.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: A0A6H5KHJ6_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ6_9PHAE) HSP 1 Score: 445 bits (1145), Expect = 1.590e-154 Identity = 264/305 (86.56%), Postives = 268/305 (87.87%), Query Frame = 0
Query: 1 MPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKMAQSCGGEAVSMQGIVAKALVRLTMERPVVLFAAKNALFLPRGNGGSNTSSSNSRGDVATEHREYLPQIWQRAVTFRVLLRXXXXXXXXXXXXXXXXXXXXXXXXTLSLFTARVLSLRPAKGSYGXXXXSFKAAAAGAGRIGCNGAGGDGESRPYFFVVTDDGIHDVPAAATLGEGEGWEGR 305
MPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGG+G HAS SR QQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKMAQSCGGEAVSMQGIVAKALVRLTMERPVVLFAAKN L GD ATEHREYLPQIWQRAVTFRVLL+ XXXXXXXXXXXXXXXXXXXXXX LSLFTARVLSLR AKG+YG SFKAAAAGAGR+G GAGGDGESRPYFFVVTDDGIHDVPAAATLGEGEGWEGR
Sbjct: 77 MPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGVGGGGGTIHASPSRLQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKMAQSCGGEAVSMQGIVAKALVRLTMERPVVLFAAKNGKDL---------------GDAATEHREYLPQIWQRAVTFRVLLQRXXXXXXXXXXXXXXXXXXXXXX-ALSLFTARVLSLRLAKGNYGGGGGSFKAAAAGAGRVGRYGAGGDGESRPYFFVVTDDGIHDVPAAATLGEGEGWEGR 365
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: D7FPE2_ECTSI (Rad51 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE2_ECTSI) HSP 1 Score: 231 bits (590), Expect = 1.000e-72 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKM 124
MPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDK+
Sbjct: 77 MPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKV 200
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: A0A068VDW2_COFCA (RECA_2 domain-containing protein n=12 Tax=Coffea TaxID=13442 RepID=A0A068VDW2_COFCA) HSP 1 Score: 75.5 bits (184), Expect = 6.180e-12 Identity = 61/214 (28.50%), Postives = 102/214 (47.66%), Query Frame = 0
Query: 6 GGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAV-------VVVDGMGSFFWQDKMAQSC--GG---EAVSMQGI---VAKALVRLTMERPVVLFAAKNALFLPRGNGGSNTSSS---NSRGDVATEHREYLPQIWQRAVTFRV 201
GG ER AVF D D R +LR +LLK K+ + +KS Q Q D E + C+RR +R E LA ++ + +L + + +V+D +G+F+W D+ S GG +++S+Q + V + L +L + P+++ A KN++ +G +T+ N+ +HREY+P +WQ VT R+
Sbjct: 79 GGMERLAVFVDLDCRFDVLRFSRLLKHKLIQANSNDMKS--------------------QTQYDKE-LFAECMRRFLYIRCYNSLEFLATLKTMNKQLQKQKDIQGVGVHLLVLDSIGAFYWMDRALPSLLVGGSNRKSLSLQIVMENVVQDLQKLLLVHPLLVLATKNSI-----SGDKSTADELMRNTSSGPRPKHREYMPSVWQSFVTHRI 266
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: UPI000F6079A6 (DNA repair protein XRCC2 homolog isoform X2 n=1 Tax=Coffea eugenioides TaxID=49369 RepID=UPI000F6079A6) HSP 1 Score: 73.6 bits (179), Expect = 2.750e-11 Identity = 58/207 (28.02%), Postives = 99/207 (47.83%), Query Frame = 0
Query: 6 GGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAV-------VVVDGMGSFFWQDKMAQSC--GG---EAVSMQGI---VAKALVRLTMERPVVLFAAKNALFLPRGNGGSNTSSS---NSRGDVATEHREYLPQIWQ 194
GG ER AVF D D R +LR +LLK K+ + +KS Q Q D E++ C+RR +R E LA ++ + +L + + +V+D +G+F+W D+ S GG +++S+Q + V + L +L + P+++ A KN++ +G +T+ N+ +HREY+P +WQ
Sbjct: 79 GGMERLAVFVDLDCRFDVLRFSRLLKHKLIQANSNDMKS--------------------QTQYD-EELFAECMRRFLYIRCYNSLEFLATLKTMNNQLQKQKDIQGVGVHLLVLDSIGAFYWMDRALPSLLVGGSNRKSLSLQSVMENVVQDLQKLLLVHPLLVLATKNSI-----SGDKSTADELMRNTSSGPRPKHREYMPSVWQ 259
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: D8SIY5_SELML (RECA_2 domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SIY5_SELML) HSP 1 Score: 70.1 bits (170), Expect = 6.660e-10 Identity = 65/217 (29.95%), Postives = 97/217 (44.70%), Query Frame = 0
Query: 6 GGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELG------HRPAV--VVVDGMGSFFWQDKMAQSCGGEAVSMQGI--------VAKALVRLTMERPVVLFAAKNALFLPRGNGGSNTSSSNSRGDVAT--EHREYLPQIWQRAVTFRVLLR 204
GG E + FD DGR I RL +LK +I N + +AS I L+ E+VL LRR +R FE LA+++ L + H AV V++DG+GSF+W D M+ SC S + + + + L L + ++ A K L+ P R +A+ ++REY+P WQR VT R+ L+
Sbjct: 143 GGSEAVVLMFDLDGRFDIARLTSVLKARI--NAAHKDDTASNSI---------------CLEEQGEEVLRASLRRFYCLRCFKSFEFLASLKSLHIQSSRISQEHHGKAVQLVLIDGIGSFYWLDWMS-SCAAAYTSRRTLGVQRFSELIVQELRNLRNTKLFLVLATKALLYAPP-----------KRKAIASRIQYREYMPAAWQRFVTHRLFLQ 330
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: B3RU80_TRIAD (RECA_2 domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RU80_TRIAD) HSP 1 Score: 67.4 bits (163), Expect = 3.380e-9 Identity = 47/208 (22.60%), Postives = 92/208 (44.23%), Query Frame = 0
Query: 5 LGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRP--AVVVVDGMGSFFWQDKMAQSCGGEAVSMQGIVAKALVRLTMERPVVLFAAKNALFLPRGNGGSNTSSSNSRGDVAT-------EHREYLPQIWQRAVTFRVLL 203
+ G V+ D D ++LRL +L+ + A + E+ + CL R ++R + +L+ ++ +L + + P ++++DG+GSF+WQDK + S G + + K + L E +++ A K+A+ N + S R D+A+ +H EY+P +W++ V +R +L
Sbjct: 73 MNGRSMSVVYIDCDYHFNLLRLMSILEQRYCK---------------------ACQGSNATMVKHSEEFIRKCLERFYIIRCDTIHQLITSLHLLEYSISSNPDIGIMLIDGIGSFYWQDKFSSSSGVDQL------CKIVKYLCDEHNLIVLATKSAIRKQFENSRL-ANKSRLRNDIASNYNSTHSKHMEYMPNVWRKLVKYRYIL 252
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: A0A3B4DFJ9_PYGNA (X-ray repair cross complementing 2 n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4DFJ9_PYGNA) HSP 1 Score: 66.2 bits (160), Expect = 8.920e-9 Identity = 55/216 (25.46%), Postives = 95/216 (43.98%), Query Frame = 0
Query: 1 MPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAV--VVVDGMGSFFWQDKMAQSCGGEAVSMQGI----VAKALVRLTMERPVVLFAAKNALFLPRGNGGSNTSSSNSRGDVATEH--------REYLPQIWQRAVTFRVL 202
+P GG E VF D D +LRL +L+ +++ SA +S+ E+ + CLRRL VV + +LL + L RPA+ +V+D + +F+W D+ S GGE+++ Q A+ L + + +V+FA +A+ + +T +S +T + YL + WQR +T R++
Sbjct: 67 LPKDSGGLEVEVVFIDTDYHFDMLRLVSILEARLTPTAEENADSA---------------------ESETEEAVRSCLRRLSVVHCSSSVQLLLTLHYLEGTFCSRPALCLLVIDSISAFYWVDR---SSGGESLARQEANLRKCAELLNKFRRDYGIVVFATTHAIMRNYSSAAGSTPHGSSEASGSTPSWRNFTDFDKPYLCRTWQRILTQRLV 258
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: A0A8B9H4A6_ASTMX (X-ray repair cross complementing 2 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9H4A6_ASTMX) HSP 1 Score: 64.7 bits (156), Expect = 3.020e-8 Identity = 54/213 (25.35%), Postives = 99/213 (46.48%), Query Frame = 0
Query: 1 MPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAV--VVVDGMGSFFWQDKMAQSCGGEAVSMQGI----VAKALVRLTMERPVVLFAAKNAL---FLPRGNGGSNTSSSNS--RGDVATEHREYLPQIWQRAVTFRVL 202
+P GG E VF D D +LRL +L+ +++ A+ +S+ E+ + CLRRL V+ + +LL + L + RP++ +V+D + +F+W D+ S GGE+++ Q A+ L +L + +V+FA +A+ + +G S S S + +V + YL + WQ+ +T R++
Sbjct: 67 LPKDSGGLEVEVVFVDTDYHFDMLRLVSILETRLTG---------------------AADENADGSESETEEAVRCCLRRLSVIHCSSSVQLLLTLHYLEGTICSRPSLCLLVIDSISAFYWMDR---SSGGESLARQESNLRKCAELLNKLRRDYGIVVFATAHAVMRNYSSAAHGSSEPSGSTPSWKKNVMDFDKPYLCRTWQKILTHRLV 255
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: UPI000D1C81AE (DNA repair protein XRCC2 homolog isoform X1 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C81AE) HSP 1 Score: 62.8 bits (151), Expect = 1.880e-7 Identity = 61/209 (29.19%), Postives = 91/209 (43.54%), Query Frame = 0
Query: 6 GGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELG------HRPAV--VVVDGMGSFFWQDKMAQSCGGEAVSMQGI--------VAKALVRLTMERPVVLFAAKNALFLPRGNGGSNTSSSNSRGDVAT--EHREYLPQIWQRA 196
GG E + FD DGR I RL +LK +I N + +AS I L+ E+VL LRR +R FE LA+++ L + H AV V++DG+GSF+W D M+ SC S + + + + L L + ++ A K L+ P R +A+ ++REY+P WQ A
Sbjct: 143 GGSEAVVLMFDLDGRFDIARLTSVLKARI--NEAHKDDTASNSI---------------CLEEQGEEVLRASLRRFYCLRCFKSFEFLASLKSLHIQSSRISQEHHGKAVQLVLIDGIGSFYWLDWMS-SCAAAYTSRRTLGVQRFSELIVQELRNLRNTKLFLVLATKALLYAPP-----------KRKAIASRIQYREYMPAAWQNA 322
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Match: W7U480_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U480_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 3.740e-6 Identity = 39/132 (29.55%), Postives = 62/132 (46.97%), Query Frame = 0
Query: 83 VVRPAGLFELLAAIEVLRFELGH-----RPAVVVVDGMGSFFWQDKMAQSCGGEAVSMQGIVAKALVRLTMERPVVLFAAKNALFLPRGN---GGSNTSSSNSRGDV---ATEHREYLPQIWQRAVTFRVLL 203
+VR E + +E L+++L P +VV+D +GS F++ K A+SC ++A+ + R+ + V + A K ALF + GG G EH+EY+P W R VT R+ L
Sbjct: 211 LVRCVDDLEAFSVLETLKYDLDRGEGAGTPTLVVLDSLGSCFYERKAAESCHQGQSCFDYMIARCIGRMAQSQAVSVIACKPALFAGQRTVHEGGKEGGKEEGNGRYRYPGLEHKEYMPGQWSRLVTHRLTL 342 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16250.4536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 10
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig16250.4536.1 ID=prot_Ecto-sp13_S_contig16250.4536.1|Name=mRNA_Ecto-sp13_S_contig16250.4536.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=306bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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