prot_Ecto-sp13_S_contig16245.4531.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16245.4531.1
Unique Nameprot_Ecto-sp13_S_contig16245.4531.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length217
Homology
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: A0A6H5KRW6_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW6_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 5.970e-147
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 0
Query:    1 MPPTLHVRRSFERIYQNDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKLEALLRAAAGEALQGGEAALAPPAGSVPVEAAGRRRGKKKGCVEKAGEPPVDRGDRPPLNRSLSA 216
            MPP+LHV+RS ER+YQNDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGG FIGGCSDALVLHAQGKLE LLRAAAGEALQGGEAALAPP GSV VEAA RRRGKK GCVEKAGEPPV+RGDRPPLNRSLSA
Sbjct:    1 MPPSLHVQRSCERVYQNDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGNFIGGCSDALVLHAQGKLEPLLRAAAGEALQGGEAALAPPVGSVAVEAAERRRGKKMGCVEKAGEPPVNRGDRPPLNRSLSA 216          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: D8LL87_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL87_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 1.240e-134
Identity = 197/212 (92.92%), Postives = 199/212 (93.87%), Query Frame = 0
Query:    5 LHVRRSFERIYQNDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKLEALLRAAAGEALQGGEAALAPPAGSVPVEAAGRRRGKKKGCVEKAGEPPVDRGDRPPLNRSLSA 216
            L  R  F    +NDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGG FIGGCSDALVLHAQGKLE LLRAAAGEAL+GGEAALAPPAGS  VEAA RRRGKKKGCVEKAGEPPVDRGDRPPLNRSLSA
Sbjct:  258 LMPRADFVAHIKNDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGNFIGGCSDALVLHAQGKLEPLLRAAAGEALRGGEAALAPPAGSAAVEAAERRRGKKKGCVEKAGEPPVDRGDRPPLNRSLSA 469          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: A0A3P3YFY1_PLABS (Glutaredoxin domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YFY1_PLABS)

HSP 1 Score: 90.1 bits (222), Expect = 1.210e-19
Identity = 44/93 (47.31%), Postives = 62/93 (66.67%), Query Frame = 0
Query:   64 VERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKLEALL 156
            +++ +    +++FSKTYC +C+KLKALL++L++  R  ELD  + G AMQ  L+    S+C TVPQLF GGKF+GGC D   LH  GK   L+
Sbjct:    8 IQQIVQSAFIVMFSKTYCPYCSKLKALLQKLQLDARIVELDAIEDGRAMQNALSQ--VSQCNTVPQLFVGGKFVGGCDDVHRLHDSGKFLVLV 98          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: A0A6U4UCS5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4UCS5_HEMAN)

HSP 1 Score: 93.6 bits (231), Expect = 1.170e-18
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 0
Query:    5 LHVRRSFERIYQNDGDQ---PRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKL 152
            L  +  F     N+GD    P+ T  CD K C       W  +++RFA + E     M   +VER ++   V++F+K+YCS+CA++K L +EL+   +  +LD  + G  +Q+ L+ +  +   T PQ+F  G FIGG SD   LH +G L
Sbjct:  276 LSPKTDFVAWISNEGDDKAAPKFTKMCDDKACWLLPGDDWTGIRNRFAPVEELDCAAM---MVERAVTESDVVLFTKSYCSYCAQVKQLFKELQQKVQAFDLDTMERGLEIQVALSGK--TGVTTTPQVFVRGDFIGGNSDVFELHEKGSL 421          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: A0A0G4IY80_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IY80_PLABS)

HSP 1 Score: 89.7 bits (221), Expect = 2.200e-18
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 0
Query:   64 VERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGK 151
            +++ +    +++FSKTYC +C+KLKALL++L++  R  ELD  + G AMQ  L+    S+C TVPQLF GGKF+GGC D   LH  GK
Sbjct:    8 IQQIVQSAFIVMFSKTYCPYCSKLKALLQKLQLDARIVELDAIEDGRAMQNALSQ--VSQCNTVPQLFVGGKFVGGCDDVHRLHDSGK 93          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: D8TNR1_VOLCA (Glutaredoxin domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=D8TNR1_VOLCA)

HSP 1 Score: 86.7 bits (213), Expect = 4.220e-18
Identity = 39/93 (41.94%), Postives = 62/93 (66.67%), Query Frame = 0
Query:   64 VERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKLEALL 156
            +++ ++   V+V+SKTYC +C ++K L  EL++P++  ELD   G    ++  A +P +   TVPQ+F GGKFIGGC D +  HA GKL+++L
Sbjct:   40 IKQTVADNKVVVYSKTYCPYCTRVKGLFTELKVPYKVLELDN-MGSEGAEIQDALQPITGRRTVPQVFVGGKFIGGCDDTMAAHAAGKLKSVL 131          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: A0A835Y2D1_9CHLO (Glutaredoxin domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y2D1_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 5.080e-18
Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 0
Query:   73 VLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKLEALLRA 158
            V +FSKTYC +C ++K L+ EL++PF+  ELD   G    +L  A +P +   TVPQ+F GGKFIGGC D + LH  GKL+  L A
Sbjct:   43 VAIFSKTYCPYCTRVKGLMTELKVPFQVLELDN-MGAEGQELQDALQPVTGRRTVPQVFVGGKFIGGCDDTVALHNAGKLKGELAA 127          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: A0A2J7ZM75_9CHLO (Glutaredoxin n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZM75_9CHLO)

HSP 1 Score: 84.3 bits (207), Expect = 2.780e-17
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 0
Query:   64 VERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKLEALL 156
            ++  ++   V+V+SKTYC +C + K LL +L++PF+  ELD T G    +L  A +  +   TVPQ+F GGKF+GGC D +  HA G L+ +L
Sbjct:   34 IKETVAANKVVVYSKTYCPYCTRAKGLLSDLKVPFKVLELD-TMGAEGTELQDALQTITGRRTVPQVFVGGKFLGGCDDTVAAHASGSLKTVL 125          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: A0A150GC45_GONPE (Glutaredoxin domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GC45_GONPE)

HSP 1 Score: 83.6 bits (205), Expect = 5.630e-17
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 0
Query:   64 VERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKLEALL 156
            +++ ++   V+V+SKTYC +C ++K L  EL++P +  ELD   G    +L  A +P +   TVPQ+F GGKFIGGC D +  HA GKL+  L
Sbjct:   35 IKQTVADNKVVVYSKTYCPYCTRVKGLFTELKVPHKVLELDG-MGAEGAELQDALQPITGRRTVPQVFIGGKFIGGCDDTMAAHAAGKLKVAL 126          
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Match: I1IZH6_BRADI (Glutaredoxin domain-containing protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IZH6_BRADI)

HSP 1 Score: 83.2 bits (204), Expect = 6.950e-17
Identity = 47/100 (47.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:   57 RTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTEELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQGKLEALL 156
            RTM  A  +  ++   V+VFSK+YC FC K+K L  +L   F+  ELDK   GA MQ  LA     R  TVP +F  GK IGGC D + L+  GKL ALL
Sbjct:   14 RTMALAKAKEIVASAPVVVFSKSYCPFCVKVKQLFTQLGASFKAIELDKESDGAEMQSALAEWTGQR--TVPNVFINGKHIGGCDDTVALNNGGKLVALL 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16245.4531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRW6_9PHAE5.970e-14794.91Glutaredoxin domain-containing protein n=1 Tax=Ect... [more]
D8LL87_ECTSI1.240e-13492.92Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A3P3YFY1_PLABS1.210e-1947.31Glutaredoxin domain-containing protein n=1 Tax=Pla... [more]
A0A6U4UCS5_HEMAN1.170e-1834.44Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A0G4IY80_PLABS2.200e-1848.86Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
D8TNR1_VOLCA4.220e-1841.94Glutaredoxin domain-containing protein n=2 Tax=Vol... [more]
A0A835Y2D1_9CHLO5.080e-1848.84Glutaredoxin domain-containing protein n=1 Tax=Eda... [more]
A0A2J7ZM75_9CHLO2.780e-1741.94Glutaredoxin n=1 Tax=Tetrabaena socialis TaxID=477... [more]
A0A150GC45_GONPE5.630e-1743.01Glutaredoxin domain-containing protein n=1 Tax=Gon... [more]
I1IZH6_BRADI6.950e-1747.00Glutaredoxin domain-containing protein n=2 Tax=Bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 120..133
score: 34.82
coord: 134..147
score: 44.35
coord: 73..91
score: 44.3
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 73..137
e-value: 8.5E-12
score: 45.1
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 61..163
score: 18.584
NoneNo IPR availableGENE3D3.40.30.10coord: 55..164
e-value: 3.2E-25
score: 89.9
NoneNo IPR availablePANTHERPTHR45694FAMILY NOT NAMEDcoord: 67..169
NoneNo IPR availablePANTHERPTHR45694:SF15GLUTAREDOXIN-1coord: 67..169
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 62..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16245contigEcto-sp13_S_contig16245:131..3352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16245.4531.1mRNA_Ecto-sp13_S_contig16245.4531.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16245 131..3352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16245.4531.1 ID=prot_Ecto-sp13_S_contig16245.4531.1|Name=mRNA_Ecto-sp13_S_contig16245.4531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
MPPTLHVRRSFERIYQNDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFAT
LPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRT
EELDKTQGGAAMQLVLASRPTSRCLTVPQLFAGGKFIGGCSDALVLHAQG
KLEALLRAAAGEALQGGEAALAPPAGSVPVEAAGRRRGKKKGCVEKAGEP
PVDRGDRPPLNRSLSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR002109Glutaredoxin
IPR036249Thioredoxin-like_sf