prot_Ecto-sp13_S_contig16240.4528.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16240.4528.1
Unique Nameprot_Ecto-sp13_S_contig16240.4528.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length150
Homology
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: A0A6H5JWE1_9PHAE (B30.2/SPRY domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWE1_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.410e-37
Identity = 78/92 (84.78%), Postives = 82/92 (89.13%), Query Frame = 0
Query:    1 MLVSNGECPSAVTENAPGVTRTLANSPGTVLRSNATKEAPPQCKIDGVLSALSDLEEAGLKQEEMDEVLADARFVAPLSSGNSAELVRGGLD 92
            MLVSNGECPSAV EN PGVTRTLA+S  TVL SNATKEAPP+  IDGV+SALS LEEAGLKQEEMDEVLADARFVAPLSSG+S ELVRGG D
Sbjct: 2036 MLVSNGECPSAVPENEPGVTRTLADSARTVLCSNATKEAPPKYTIDGVISALSHLEEAGLKQEEMDEVLADARFVAPLSSGDSTELVRGGED 2127          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: UPI001BB22953 (probable E3 ubiquitin-protein ligase HERC1 isoform X3 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB22953)

HSP 1 Score: 60.1 bits (144), Expect = 1.250e-7
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:   49 LSALSDLEEAGLKQEEMDEVLADARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            L ++SD++++G+ ++   EV+   RF    + G    +V GG    +T  N  EY  R    R  E   Q AA R GM   +P  +LSLLT+R+LEQ+VCG
Sbjct: 4941 LRSISDIDKSGVNEDNFHEVIPLERFEGQSADGRFVPVVPGGWSIPLTFSNRKEYVERALAYRLHELDRQVAAVREGMSWIIPIPLLSLLTYRQLEQMVCG 5041          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: UPI001BB27410 (probable E3 ubiquitin-protein ligase HERC1 isoform X2 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB27410)

HSP 1 Score: 60.1 bits (144), Expect = 1.250e-7
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:   49 LSALSDLEEAGLKQEEMDEVLADARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            L ++SD++++G+ ++   EV+   RF    + G    +V GG    +T  N  EY  R    R  E   Q AA R GM   +P  +LSLLT+R+LEQ+VCG
Sbjct: 4941 LRSISDIDKSGVNEDNFHEVIPLERFEGQSADGRFVPVVPGGWSIPLTFSNRKEYVERALAYRLHELDRQVAAVREGMSWIIPIPLLSLLTYRQLEQMVCG 5041          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: UPI001BB143C8 (probable E3 ubiquitin-protein ligase HERC1 isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB143C8)

HSP 1 Score: 60.1 bits (144), Expect = 1.250e-7
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:   49 LSALSDLEEAGLKQEEMDEVLADARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            L ++SD++++G+ ++   EV+   RF    + G    +V GG    +T  N  EY  R    R  E   Q AA R GM   +P  +LSLLT+R+LEQ+VCG
Sbjct: 4942 LRSISDIDKSGVNEDNFHEVIPLERFEGQSADGRFVPVVPGGWSIPLTFSNRKEYVERALAYRLHELDRQVAAVREGMSWIIPIPLLSLLTYRQLEQMVCG 5042          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: UPI001BB2B9BD (LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC1 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2B9BD)

HSP 1 Score: 60.1 bits (144), Expect = 1.250e-7
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:   49 LSALSDLEEAGLKQEEMDEVLADARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            L ++SD++++G+ ++   EV+   RF    + G    +V GG    +T  N  EY  R    R  E   Q AA R GM   +P  +LSLLT+R+LEQ+VCG
Sbjct: 4949 LRSISDIDKSGVNEDNFHEVIPLERFEGQSADGRFVPVVPGGWSIPLTFSNRKEYVERALAYRLHELDRQVAAVREGMSWIIPIPLLSLLTYRQLEQMVCG 5049          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: A0A484EBI2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBI2_BRELC)

HSP 1 Score: 59.3 bits (142), Expect = 2.310e-7
Identity = 48/143 (33.57%), Postives = 65/143 (45.45%), Query Frame = 0
Query:    9 PSAVTENAPGVTRTLANSPGTVLRSNATKEAPPQCKIDGVLSALSDLEEAGLKQEEMDEVLA--DARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            PS V +   G T T A+   T        +    C+ DG+L+           +EE     A  + R+ A   +G   ELV GG+ R+V   N  EY     R R  E ++Q AA   G     P RVL+LLTW+ELE + CG
Sbjct: 4792 PSLVWKQLLGQTLTRADLEDTDAMFIQMLDGIAHCESDGILT-----------EEEFATAFAGLELRYTASSCTGEEIELVPGGITRKVDFLNRLEYCRLAERARLEECSAQVAAMARGFATLFPRRVLTLLTWQELEILACG 4923          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: A0A7M7SUN9_STRPU (Uncharacterized protein n=3 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7SUN9_STRPU)

HSP 1 Score: 59.3 bits (142), Expect = 2.320e-7
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0
Query:   49 LSALSDLEEAGLKQEEMDEVLADARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            L  +SD++++G+ ++   EV+   RF    + G    +V GG    +T  N  EY  R    R  E   Q AA R GM   +P  +LSLLT+R+LEQ+VCG
Sbjct: 4943 LRNISDIDKSGVNEDNFHEVIPLERFEGQSADGRFVPIVPGGWSIPLTFSNRKEYVERALAYRLHELDRQVAAVREGMSWIIPIPLLSLLTYRQLEQMVCG 5043          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: A0A8K1FMX5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMX5_PYTOL)

HSP 1 Score: 58.5 bits (140), Expect = 4.250e-7
Identity = 40/105 (38.10%), Postives = 52/105 (49.52%), Query Frame = 0
Query:   48 VLSALSDLEEAGLKQEEMDEVL---ADARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            +L  + + E  G+  E+  E      D RF A   +G   ELV GG   RVT +N  EY     + R  E A Q AA   G+    P RVL+LLTW E+E + CG
Sbjct: 3208 MLDGIQNCERDGIMTEDEFETAFEGLDLRFTAFDCNGQEIELVEGGKSTRVTFENRLEYCQLAEQYRLQEGAKQVAAMARGLATIFPVRVLTLLTWHEMEMLTCG 3312          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: A0A7S2TPF8_9EUKA (HECT-type E3 ubiquitin transferase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TPF8_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 6.760e-7
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0
Query:   62 QEEMDEVLADARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            +E  D+ + D RF    S GN+ EL+RGG    V  +N   Y       +  E  +Q  A R G+   +P ++LSL TWR+L+  VCG
Sbjct:    4 KEAFDKAVGDVRFAVRSSEGNAVELLRGGSAIHVNIENADTYINLYRDYKLNETRTQCEAMRRGLATVIPYQILSLFTWRDLQDQVCG 91          
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Match: A0A6P6KLZ9_CARAU (probable E3 ubiquitin-protein ligase HERC1 isoform X6 n=1 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6KLZ9_CARAU)

HSP 1 Score: 56.2 bits (134), Expect = 2.710e-6
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0
Query:   49 LSALSDLEEAGLKQEEMDEVLADARFVAPLSSGNSAELVRGGLDRRVTNQNLGEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG 149
            LS++  LE++G+ ++   E++    FV   + G    ++ GG    +T  N  EY  R    R  E   Q AA R GM   +P  +LSLLT R+LEQ+VCG
Sbjct: 4625 LSSILHLEDSGITEQNFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIEYRLHEMERQVAAVREGMSWIVPVPLLSLLTARQLEQMVCG 4725          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16240.4528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWE1_9PHAE2.410e-3784.78B30.2/SPRY domain-containing protein n=2 Tax=Ectoc... [more]
UPI001BB229531.250e-737.62probable E3 ubiquitin-protein ligase HERC1 isoform... [more]
UPI001BB274101.250e-737.62probable E3 ubiquitin-protein ligase HERC1 isoform... [more]
UPI001BB143C81.250e-737.62probable E3 ubiquitin-protein ligase HERC1 isoform... [more]
UPI001BB2B9BD1.250e-737.62LOW QUALITY PROTEIN: probable E3 ubiquitin-protein... [more]
A0A484EBI2_BRELC2.310e-733.57Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7M7SUN9_STRPU2.320e-737.62Uncharacterized protein n=3 Tax=Strongylocentrotus... [more]
A0A8K1FMX5_PYTOL4.250e-738.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2TPF8_9EUKA6.760e-736.36HECT-type E3 ubiquitin transferase n=1 Tax=Lothare... [more]
A0A6P6KLZ9_CARAU2.710e-636.63probable E3 ubiquitin-protein ligase HERC1 isoform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1750.10coord: 115..149
e-value: 1.0E-12
score: 50.0
NoneNo IPR availableGENE3D3.30.2160.10coord: 62..114
e-value: 1.0E-12
score: 50.0
IPR000569HECT domainPFAMPF00632HECTcoord: 70..149
e-value: 6.2E-11
score: 42.3
IPR000569HECT domainPROSITEPS50237HECTcoord: 81..149
score: 8.996
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 66..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16240contigEcto-sp13_S_contig16240:892..1867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16240.4528.1mRNA_Ecto-sp13_S_contig16240.4528.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16240 883..1867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16240.4528.1 ID=prot_Ecto-sp13_S_contig16240.4528.1|Name=mRNA_Ecto-sp13_S_contig16240.4528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp
MLVSNGECPSAVTENAPGVTRTLANSPGTVLRSNATKEAPPQCKIDGVLS
ALSDLEEAGLKQEEMDEVLADARFVAPLSSGNSAELVRGGLDRRVTNQNL
GEYRARLARLRALEYASQAAAFRAGMEAALPNRVLSLLTWRELEQIVCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
IPR035983Hect_E3_ubiquitin_ligase