mRNA_Ecto-sp13_S_contig1624.4527.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1624.4527.1
Unique NamemRNA_Ecto-sp13_S_contig1624.4527.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: D7G0W0_ECTSI (Similar to DEK oncogene (DNA binding) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W0_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 4.440e-109
Identity = 175/193 (90.67%), Postives = 177/193 (91.71%), Query Frame = 1 
Query:    1 QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKKVFICSSHVCGVSAKREVKPRPLNGYMMFSREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEAF 579
            QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKK               EVKPRPLNGYMMF+REARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKE +
Sbjct:    4 QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKKRKXXXXXXXXXXXXXEVKPRPLNGYMMFTREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEKY 196
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: A0A6H5KFT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT8_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 7.540e-109
Identity = 174/193 (90.16%), Postives = 176/193 (91.19%), Query Frame = 1 
Query:    1 QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKKVFICSSHVCGVSAKREVKPRPLNGYMMFSREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEAF 579
            +GSGT LADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKK              REVKPRPLNGYMMFSREARAKVLKADPGLK TEVTAKMGQMWAECSDAQKE +
Sbjct:   37 EGSGTLLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKKRXXXXXXXXXXXXXREVKPRPLNGYMMFSREARAKVLKADPGLKSTEVTAKMGQMWAECSDAQKEKY 229
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: A0A482SK40_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SK40_9ARCH)

HSP 1 Score: 110 bits (275), Expect = 3.420e-23
Identity = 65/197 (32.99%), Postives = 106/197 (53.81%), Query Frame = 1 
Query:    4 GSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKK-WTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLA------SPDPSESKGPVAKKPKKAAKKVFICSSHVCGVSAKREVKPRPLNGYMMFSREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKE 573
            GSGTKLA        L K+  D +++K  H  +Y   G+KT  K N+R F+GF  D     + +K+ E+KK WTV+ L++  +L G+E+GG++ E+ +R+V +LA      +P  ++ +   +K PKK +KK            +K E   R    Y++FS   RA+V + +P +  T+V   +G+ W   S  +KE
Sbjct:   91 GSGTKLAQYEYFLQELTKVKGDSEVVKCLHTLMYNTPGRKTSAKHNLREFNGFGSDVNVKEKTEKVVENKKKWTVSLLKEALSLFGMERGGNREELCERLVEYLAHPRIVVAPGKTKRRRSTSKSPKKQSKK------------SKGEKVKRAPTAYILFSNAHRAEVKEQNPDISFTDVGKTLGEKWNALSPEEKE 275
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: A0A812PF79_9DINO (Hmg-1.2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PF79_9DINO)

HSP 1 Score: 112 bits (279), Expect = 1.490e-21
Identity = 76/216 (35.19%), Postives = 109/216 (50.46%), Query Frame = 1 
Query:    1 QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDAR--MKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPV-------AKKPKKAAKKVFICSSHVCGVSA-----------KREVKPRPLNG-YMMFSREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEAFLA 585
            QG G KL D+ IV  +L+++ AD ++LK  H  L+G  G    RKKNIR+F G+ D  G DA   ++++T SK WT+A L+D    +GL+K G   E+  R+V+FLA P  +    P        +  P K  K     SS   G  A           K E  P+   G YM+F++  R +V  A+P  K  E+   +G MW E   A+ +A  A
Sbjct: 1295 QGEGVKLGDLDIVNYHLSRVTADVEILKQIHRLLFGTQGAVASRKKNIRAFCGY-DTAGFDAEKIVERITSSKVWTIALLKDALAFMGLDKSGASLELASRLVAFLAKPHSNVKAAPAKAVAAGGSSSPVKKTKGTKRASSRSEGADAGKTKXXXXXXXKPEGYPKAALGPYMLFTQSVRPEVKAANPDAKIPELGKILGAMWKEADQAEWKAKAA 1509
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: A0A484D7X5_PERFV (SAP domain-containing protein n=4 Tax=Percidae TaxID=8165 RepID=A0A484D7X5_PERFV)

HSP 1 Score: 86.3 bits (212), Expect = 4.660e-14
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 1 
Query:    4 GSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFP---DDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKK 357
            GSG KL DIP +   +NKI A    LK  HA L+   GK  + KKN+R F+GFP   D +    + +KL ++   T + L+ +C +L LEK G+ A++VDRI++FL  P  S  + PV KK
Sbjct:   73 GSGDKLGDIPRIGFQINKIKAAD--LKPLHAILFDRQGKMALLKKNLRLFNGFPFDADSEQYTKKREKLLKNSNLTNSKLKVVCGVLDLEKKGNHADLVDRILNFLIEPKNSGKRLPVKKK 191
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: A0A0L8HRU0_OCTBM (SAP domain-containing protein n=2 Tax=Octopus TaxID=6643 RepID=A0A0L8HRU0_OCTBM)

HSP 1 Score: 81.3 bits (199), Expect = 1.400e-12
Identity = 46/109 (42.20%), Postives = 66/109 (60.55%), Query Frame = 1 
Query:    1 QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARM--KKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASP 321
            +G+G KL D PI+   LN++ A++  LK  H  L+   G     K+NIR F+GF  D GKD +   KK     K T A+LR +C +LGLE+GG K E++++I+ FL  P
Sbjct:  113 EGTGEKLGDCPIIEYQLNRVKAEN--LKIIHRALFDRPGALVEIKRNIRKFNGF--DFGKDDKRFDKKRALLAKNTTASLRKICEILGLERGGAKDEILNKIMDFLVKP 217
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: UPI001899BA55 (protein DEK n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI001899BA55)

HSP 1 Score: 79.7 bits (195), Expect = 4.250e-12
Identity = 54/137 (39.42%), Postives = 75/137 (54.74%), Query Frame = 1 
Query:    4 GSGTKLADIPIVPVNLNKID-ADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFP---DDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKKVFICSSHV 402
            G G KL DIP     + K+  AD   LK  H  L+   GK    KKN+R F+GFP   D      +  KL     +T + L+++CT+L LEK G  +++VDRI+ FL +P  S  + PV KK +K+ KK  +CS  V
Sbjct:   55 GGGDKLGDIPRTNYQITKMKPAD---LKPLHNILFDRPGKTASMKKNLRLFNGFPFSADSPQFSKKRDKLLRKSNFTNSKLKEVCTVLDLEKKGTHSDLVDRILMFLVAPKNSGKRVPVKKK-RKSKKK--LCSDDV 185
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: UPI001425B493 (protein DEK-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B493)

HSP 1 Score: 80.1 bits (196), Expect = 4.860e-12
Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 1 
Query:    1 QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAK 354
            +G GTKL ++  V   L++ +AD   LK  + FL+G VGK    KK+IR FSGF   +      KK     + T+ ALRD CT L LE+GG+K  V+ RI+ F  +P PS  K P  K
Sbjct:  122 EGQGTKLGEMERVEFVLSRTNADQ--LKLLYRFLFGKVGKLFEVKKHIRQFSGFNFKENDHEYDKKEQFLIRVTMTALRDFCTYLDLERGGNKDVVMKRIMDFCLNPVPSGRKVPKKK 237
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: A0A3Q3AVJ4_KRYMA (Protein DEK n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3AVJ4_KRYMA)

HSP 1 Score: 75.9 bits (185), Expect = 4.030e-11
Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 1 
Query:    1 QGSGTKLADIPIVPVNLNKID-ADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFP---DDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKK 357
            +G G KL DIP     + ++  AD   LK  H+ L+   GK    KKN+R F+GF    D +  + + +KL ++  +T + L+++CT+L LEK G  +++VDRI+ FL +P  S  + P+ KK
Sbjct:   64 EGGGDKLGDIPRTNYRITRMKPAD---LKPLHSILFDRPGKMASIKKNLRLFNGFSFDADSEQYNKKREKLLKNSNFTNSKLKEVCTVLDLEKKGTHSDLVDRILMFLIAPKNSGKRVPMKKK 183
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BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Match: UPI001863E2E7 (protein DEK n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863E2E7)

HSP 1 Score: 75.9 bits (185), Expect = 9.350e-11
Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = 1 
Query:    1 QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKA 369
            QG G KL +I  V   + K+  D   LK  H  L+   G     KKN+R FSGF  +   +A MKK+   K++T + L+++C++L LE+ G     V+RI++FL   DP  S   + KK +KA
Sbjct:   80 QGKGEKLGEIVRVAYFIGKMKVDD--LKPLHKILFDRPGAAASVKKNLRQFSGFSFEANSEAYMKKMERMKRFTNSVLKNICSVLDLERSGTHDAKVERILTFLL--DPKSSGKTLPKKKRKA 198
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1624.4527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7G0W0_ECTSI4.440e-10990.67Similar to DEK oncogene (DNA binding) n=1 Tax=Ecto... [more]
A0A6H5KFT8_9PHAE7.540e-10990.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482SK40_9ARCH3.420e-2332.99Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A812PF79_9DINO1.490e-2135.19Hmg-1.2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
A0A484D7X5_PERFV4.660e-1442.15SAP domain-containing protein n=4 Tax=Percidae Tax... [more]
A0A0L8HRU0_OCTBM1.400e-1242.20SAP domain-containing protein n=2 Tax=Octopus TaxI... [more]
UPI001899BA554.250e-1239.42protein DEK n=1 Tax=Nematolebias whitei TaxID=4517... [more]
UPI001425B4934.860e-1242.37protein DEK-like n=1 Tax=Anneissia japonica TaxID=... [more]
A0A3Q3AVJ4_KRYMA4.030e-1136.59Protein DEK n=2 Tax=Kryptolebias marmoratus TaxID=... [more]
UPI001863E2E79.350e-1137.40protein DEK n=1 Tax=Megalops cyprinoides TaxID=118... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1624contigEcto-sp13_S_contig1624:9463..15472 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score60.5
Seed ortholog evalue5.3e-07
Seed eggNOG ortholog2880.D7G0W0
Preferred nameDEK
Model size2188
KEGG koko:K17046
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006282,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006996,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0016032,GO:0016043,GO:0016070,GO:0018130,GO:0019058,GO:0019079,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0040029,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051252,GO:0051276,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097659,GO:0099080,GO:0099081,GO:0099512,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000779,GO:2001020,GO:2001032,GO:2001141
Exons9
EggNOG free text desc.regulation of double-strand break repair via nonhomologous end joining
EggNOG OGsKOG2266@1,KOG2266@2759
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-23_002090.1
Cds size300
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1624.4527.1prot_Ecto-sp13_S_contig1624.4527.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1624 9767..10066 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462855.4754777-UTR-Ecto-sp13_S_contig1624:9462..97661681462855.4754777-UTR-Ecto-sp13_S_contig1624:9462..9766Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 9463..9766 -
1681462855.493623-UTR-Ecto-sp13_S_contig1624:10066..107551681462855.493623-UTR-Ecto-sp13_S_contig1624:10066..10755Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 10067..10755 -
1681462855.5041533-UTR-Ecto-sp13_S_contig1624:10918..110771681462855.5041533-UTR-Ecto-sp13_S_contig1624:10918..11077Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 10919..11077 -
1681462855.5122242-UTR-Ecto-sp13_S_contig1624:11314..114771681462855.5122242-UTR-Ecto-sp13_S_contig1624:11314..11477Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 11315..11477 -
1681462855.5203178-UTR-Ecto-sp13_S_contig1624:12076..121471681462855.5203178-UTR-Ecto-sp13_S_contig1624:12076..12147Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 12077..12147 -
1681462855.5283113-UTR-Ecto-sp13_S_contig1624:12992..130791681462855.5283113-UTR-Ecto-sp13_S_contig1624:12992..13079Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 12993..13079 -
1681462855.5358627-UTR-Ecto-sp13_S_contig1624:13580..137161681462855.5358627-UTR-Ecto-sp13_S_contig1624:13580..13716Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 13581..13716 -
1681462855.54593-UTR-Ecto-sp13_S_contig1624:14351..144811681462855.54593-UTR-Ecto-sp13_S_contig1624:14351..14481Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 14352..14481 -
1681462855.563148-UTR-Ecto-sp13_S_contig1624:14893..150051681462855.563148-UTR-Ecto-sp13_S_contig1624:14893..15005Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 14894..15005 -
1681462855.5745702-UTR-Ecto-sp13_S_contig1624:15435..154721681462855.5745702-UTR-Ecto-sp13_S_contig1624:15435..15472Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 15436..15472 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462855.4855695-CDS-Ecto-sp13_S_contig1624:9766..100661681462855.4855695-CDS-Ecto-sp13_S_contig1624:9766..10066Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1624 9767..10066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1624.4527.1

>prot_Ecto-sp13_S_contig1624.4527.1 ID=prot_Ecto-sp13_S_contig1624.4527.1|Name=mRNA_Ecto-sp13_S_contig1624.4527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
MLLCGARFRVPSAIVGVVAMTTVLRLHRDETVKHSRQRGAWWQRLMCADV
VCCGSTNLSAKVSWGMPCRSGFDGLSCGEPILGSCLCPRTPVGSSLGTM*
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mRNA from alignment at Ecto-sp13_S_contig1624:9463..15472-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1624.4527.1 ID=mRNA_Ecto-sp13_S_contig1624.4527.1|Name=mRNA_Ecto-sp13_S_contig1624.4527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6010bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1624:9463..15472- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGCTCCGGGACGAAGTTGGCGGACATCCCTATCGGTGAGCGGGTCGC
ACAGAAGGTGTACCACGGCTTTTCCACGTTTAAGTGGTTTGATGGTGTTT
GGAGTCGTCTTTTGTACGGCGTCCGCTGTTTTTTCAACCACTGCATATGT
CTATTTCCTCTGCTGTAAGCATCGGTCATCAACACCCCAAATAATTTTAA
GTTGAATCTTTGTAGGTTATATGCGTTTTTTTTGGGGGGGGGTATATGTT
TCAGTTTGGCGGACGCAATAAGATGGACCGAGATGCACCACCACACTGTG
CCCATGGCAGTTGTGCCGCAGCGAGGCTGTTTTACCGCTTCTTTTTTTTT
TGCTTCCGATGTGGAAGTCGTGCGCAAACCACGAACAACGTCTTGACTGC
TGCTGCTGCTCTCATTTTGTCTCTGGCGTGCGTTGGTGGCCTCTGGGACC
TTTCCCGGGCCCTGCAGTGCCGGTGAACCTGAACAAGATCGATGCGGACC
ACGACCTGCTCAAGGCTTTCCACGCATTCCTCTATGGAGGCGTCGGCAAG
AAGACCGTCAGAAAGAAGAACATCCGCAGGTGACACCTTCTGCGAATTGC
TTGCTTGAAGTGTGACCCGCCCGTTGTAGACACCGGCCCTCTCTGCCTTC
ACCGCGTTTCGGCTCTCTCTGTCTCACTCCCTCTCTCTCGGCTATCTTTG
TATGTCCCTCCGCTGCATGTCACACCGCCATCGTCCTCATTTCGGGGGGA
GTTGTCTATTCTCCCTGCAGAGGCGTCGTTTTGGTCGTTTCGATGCCGCG
TGTATCTCCGTCGTTGTTGATTGTCTGCGCCCTTTTTGCCCTCGTTGCCT
CGCTCCTGGGGCGAGGTGTGGTGTAGTAGTTTTTTCGAACCTCGATGCCG
ACCTCCCTTTCGTCCCGCAATAGTTCTCGCGTCCCGTGTCTGGGGTTCCG
TGTCGGGTATCCCGTGTCCCGTGTCCCGTGTCCCGTACCAGTTTTTCCGG
CTTCCCCGACGACGACGGCAAGGACGCGAGGATGAAGAAGCTGACAGAGT
CCAAGAAGTGGACCGTCGCCGCGCTCAGGGACCTCTGCACCTTGCTCGGC
TTGGAGAAGGGAGGGGACAAGGTAATTTCAACCCCCCCTCTCCCTCCTTA
CCTTTTTTTTTTTTTTTCCATCACCGTCCGTGCTAACCGACCTCCGTGCA
CCTTGCGTTTGGCGAAGGAGCGGATTTATCGTTGTTCAGTATCCTGTTGT
ACGTTCTGATGAGCATTGGCGAGACAATATTTCTCGTAGCTACAACCGGG
ATGGAGGGCGGTTGTTTTGCTCGGGGTGGGTCGTGTTTTGCATTGCTCAG
CGGTAAGATCATTGACCACGTGTCCTCGAGAGGTTGGAGCGTTGTTCCCG
TAGGACCGATGACGGATGGCCAATCCTTCCTACAGTACTTTGCCAAAGGG
TGCTCAATAGTGTATGCCCTGGCCTATATATCCTCCAACATGGAGATCAC
CTCCCGCCTTTTGAGCCCACTTCCGTATGCCTTAGTGCAACTACCGTCTC
CTCCTGGCTATTCTATGCCTCAACATCGCTATGCTCCTTCCTTTTACTTT
TCCTAGCTAAGTCATGTAGAGGACAAAACGGAGAGATGACAGACACAAGG
GCACCAGCGTTATCCCCGCTCTACCACGACACATGTTCCCCCTCCTGTGC
TGCTGCTGCGTGGTGACCCGCCTGCTGTTCTTTGTCTTTTCTTGGGGGGT
GCGAAGGCCGAAGTGGTCGACCGGATCGTTTCCTTCCTGGCTAGCCCGGA
TCCATCGGAATCCAAGGGCCCGGTCGCCAAGAAGCCCAAGAAGGCTGCTA
AGAAGGTGTTTATTTGCTCTTCTCACGTATGCGGTGTATCTGGTGGATGA
TGTTTCGGGTGCCATTGTTGTTTTTCATGCATTGGTTCGGTCCCTGCCAT
CGGTTGTGGTTATCTGGCAGCCTCTTGGTCTGCCGTTGGCGATGGTGTTC
CATGCCTTACTCAAGGCTGTTGCTCGTGTCGTCCCCGGATGATGGCTTGC
TCTTGTGGTGTGCGGGCACTGCTCTCTCGTTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAAGAG
GGAGGTCAAGCCGAGGCCGCTGAACGGGTACATGATGTTCAGCAGGGAGG
CCCGCGCGAAGGTGCTCAAGGCCGACCCTGGTAAGTGGTGCGCGACGAGT
GAGATACCTTTTTTCCGTGCCTTGTTTTGTGGAAAACCGAGGGCCCGTTT
TTCTTGGAGGGTTGCCTTTCTTGGTTGCGGTTCATCTCTACCCTCAGATA
AGGCCCCAGTTATTTTGTGGTTGGTTGCGGGTGCGGAACAACCACACCTT
TTTTGTTTTTCTAGAACCACTACTTCGCGTTCAAAGGCAACAGGGTGCTT
TCGAATCGGCGTGGCACTTGTGCTGGAGGTTGGAAGCCCAACAGAAGGCT
AGGTCCGTTGCTGAACAGTTGGATAATAACAAAGTGTAGGGTTCTTCGTT
GCACCCCTGTCAGGGGAGGTAAGCGTTTTCCTCGGACGCTTGCTTTTTTT
TTTGTGTAATTGCTTTGCATCCTTTTTTTTTTCGCGCGTGTGGTTTGGTG
ATTCTCGAAGATACTTCGGTGCACCTGGCGGTCTGATTCTTTTTCTTTTT
TTTGTAGCCGAATATCTTTCGTTTGTATCCTTTCGCTTTGCCACGAGCGA
ATGTTTGGGTGTTTTGAGTGTGCCGCCTCATAAAGGAATGTCTTCGGGGT
GTGTGTGGAATGTTCTTTGCAACACCGCAAGAGTGACCCCTCCAGGCTGA
ACGGTGGCAACGCTCCTTTTGTAGTACGGCCTCGTGTAATCTTGTAGATT
GTCGCGTGTGTGTTGATTTAGTGTGCGTCGCCCGCACTAGCCGGCTTGAC
CAATGACAAGACGTCAGCCGTGTGCTTGTGTTGTTTTCGTTTATGTTGAC
CAACCTAACCGACTGAGCTACGAAAATCTGCCTCTCTTATTGCGTGTCAT
TTTTTGTCACGCATTTTTCGGGCAGGACTCAAGCCGACGGAAGTGACGGC
CAAAATGGGACAGATGTGGGCAGAGTGCTCCGACGCTCAGAAGGAGGTGG
GTGTTTTCAGCCAACCGCACTTCTGCTTCGCTTGTGCGGCGATGTATCTC
GTTCTCGTGCGGAAGGTTCATGGGCTTTTCCATGGTTTCGCCACAAATTG
TAGTGTTTAGCGCCCGCTTTAAAATGGAATTCCGTTCTTGTTTTTTTGCG
TCGTTGACTCTTTTCCGAGAAGGTCAACGCTCTCTGTGCGGGAACACCGC
ACATGCGGGACGTGTTCCCACGCTGTCGTCGCCTTCTTTAGAGATGCAGA
CTGCTGGTGCTGCACGAGACACGAGCTACTTTAAGCGCGAAATATTCAGA
ACAAGAGCGCTAAGTCCATTGTTTCCGTCGGAGCAACGTTAATTTGGTCG
TGTTCCCAATCGATCGACGGATCACGATGAGTCCATTGTGTGCTTTGGAG
CATCTTCGAGACCCAATCGATCCATAGAACGCGAAAAATTCATGGCGTTT
TGGGGGCAAAAAGAATCACGTGGTGTCTCAATCAATAGACGGAAGTCGTT
CCGACGTGGTCAGGAACAACTGCTGTGGACTACTCCTCGAGAGCCTTGGA
TGCCGATGTCGTTGCTGTTTTTCTTGCCAATTTGTGGAGATGCAGGCATT
TCTGGCCTTGACGCAACTGCTCAGCCGAGGGAGGGGCATCAGCCGAGGGA
AGGGAATATGATGCTATCAGCAAATGGGGCACACAGCTTGATGATTGGTG
TTTATTCCCCGCTCTCGGTTGTGACAAAGAAGGAAAAGGGAGAGCACATT
ACGCAAAGGCAAGGTTCGGTCCCTTCTCTCTCCTTGTCTTTTCTCGAAGT
ACATGCACCAAACTCGATGTTTTTTTTCTCTCCATTGGGATCATCTCGCC
TCCGTTGTATAACGACCAGACGGGCGGGATGCAAGGAACAATGCGCGTTC
GACCTGGAGCCACGAACGGACAAAGTGAGAACCTCGCCCCCATTTTACCC
CCAATCTTCCCTCTTGCAACGCTTTGTGGTTGCCGCGTTCACCAGAAGTA
CAAGCAGCAGGGCATCAAGGAGTTCGAGAAAAAGAAGGGGGCCGTGGTAG
AGCAAGAGGAAGACGAGGAGGATGAGAGAGAGGACGAGGGCGAGGACGAG
GGCGAGGAAGAGGGCGAGGACGAGGGCGAGGGCGAGGAAGAGGGCGAAGA
CGGGGTGGGTTGAAAAACGTGCTCGTGTCTGTCGCTTTCGGGCTTTTTCG
TTTCCCCCTTGATCTGTTCGTGAAAGCAGCTAAGGGGGTTGGTGCGGTGT
GTAGAAAATCCTACGCCATCTTGCTTGACTCGAAACCCCGCTCTTTTGCG
TGCGACGCCCAATGCAGGACTCCGGTGACGACTCGGAGTAACGCTCAGGG
GGCGGCACGCAGGAGAAGCATTGTTCGCGGGATCTCGAAGCAGAGTGGGG
GGCGTTTTCCTGCCGATGCTATGGGTAGCACCGGCAAAACACGCAACGCT
CGATTCCTTGCCAGAAATAGTACTCGTTTTTCGTTCTGCGACCCTTAAGG
TTGCGCCGCACGCTTTGCTCAGCGGCACGGGCTCTCACACTGCTGTGCCA
TCGTAGTTGTTATCCTCGCCTGGCGACCAGTGTCCGCGTTCGAAAGCGGA
ACACTGTGTACGTATTTGTCCACAAAGCCAGGAGTGTATGCGAGAAGGGG
GGGGCTTGCCCACGATCTGGTGAACTCTTTTATTTGAGCGTCTTGGCTGC
CGAATTTCCGGGGGTGGGGGATTGTGGAATGCAAGCATAGGCTTGAAGAC
ACCGTCCAGGGCCTTTCTTTCCCCAAACAATCGCGGGGTTATGGTACATA
CTTTGCGGGGCTGTGTTCCCTTGCTTGCCTTGGCACAGAGTACAGTAGTA
CGGTCTCGAGTGGCTCGTGGAATCCAGTGTTTTATGGCGGAACTGCGGAG
CTGCTGCTGGTGTGCTTCGCATCGCACACAAGGTATGTAACACCTGCCGA
ACCAACATCCCACCTAGAGAGAGGATAGAGATCCTGCATCAAGCGCTGCG
GGGTGGATGCTACTCTGCGGGGCACGTTTCCGTGTGCCCTCGGCCATAGT
CGGCGTTGTAGCGATGACTACAGTTCTGCGTCTCCATAGGGACGAAACAG
TGAAACACTCAAGGCAGCGGGGTGCCTGGTGGCAGCGGCTGATGTGTGCC
GATGTTGTTTGCTGCGGGAGCACAAACCTTTCGGCCAAGGTTTCGTGGGG
GATGCCGTGTCGCAGCGGTTTTGATGGCCTCTCTTGTGGAGAACCGATTC
TCGGCTCTTGCCTGTGCCCTAGAACACCGGTTGGTAGTTCTCTTGGTACC
ATGTAGTTATTTGTAGATGAAGCGTCTTTGGCGCTCTTGTCGGGGAGGGC
GTACGGCGCTTATGCCATGTGGTCGTGTTCCTGTCGTTTTACCATGCGAA
CAAGCTAGGATGTATTGAAGTACAGTATGCATAGTTTCATTTTTTTCTAG
CGTTTTTCGGGCGCGCGGAAGGGGTGTTGTTTTGTTTATTGTGTATCGAG
GTGTGCAGACGATCGGTGTAGAAACTGACACGAAGTTTGCCTTTTCTCGA
ACACCAGCGCGTATGGCTCTCGAGTACACCAGTGCATACCTGTTCGTCTG
CGTGTCCGTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1624:9463..15472-

>mRNA_Ecto-sp13_S_contig1624.4527.1 ID=mRNA_Ecto-sp13_S_contig1624.4527.1|Name=mRNA_Ecto-sp13_S_contig1624.4527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=300bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1624:9463..15472- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTACTCTGCGGGGCACGTTTCCGTGTGCCCTCGGCCATAGTCGGCGT
TGTAGCGATGACTACAGTTCTGCGTCTCCATAGGGACGAAACAGTGAAAC
ACTCAAGGCAGCGGGGTGCCTGGTGGCAGCGGCTGATGTGTGCCGATGTT
GTTTGCTGCGGGAGCACAAACCTTTCGGCCAAGGTTTCGTGGGGGATGCC
GTGTCGCAGCGGTTTTGATGGCCTCTCTTGTGGAGAACCGATTCTCGGCT
CTTGCCTGTGCCCTAGAACACCGGTTGGTAGTTCTCTTGGTACCATGTAG
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