prot_Ecto-sp13_S_contig16235.4522.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16235.4522.1
Unique Nameprot_Ecto-sp13_S_contig16235.4522.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length296
Homology
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: D8LEB6_ECTSI (IRK_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB6_ECTSI)

HSP 1 Score: 560 bits (1442), Expect = 8.910e-201
Identity = 283/295 (95.93%), Postives = 287/295 (97.29%), Query Frame = 0
Query:    1 NLEQEELGSRLGNQGGRRQSAVYWEDASASEFGFNVNGRGTDDNTDNLGYVLRFPDLLKRWDDVDGDRGTWYEKMKRRVLRVEMERRRSEDMRRERERTGKTADDIRAASSRSRLAHAGFRRPLERMVSIMRVGGGGVGEDCADEFAADKSKEAPALGRLSEGRQAPQGGLEAPTGSPPTLSGSGDAPAGNGGGRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 295
            NLEQEELGSRLGNQGGRRQSAVYWEDASASEFG NVNGRGTDD+TDNLGYV RFPDLLKRWDDVDGDRGTWYEKMKRR+LRVEMERRRSEDMRRERERTGKTADDIRAASSRSRLAHAGFRRP ERM SIMRVGGGGVGEDCAD+FAAD+SKEAPALGRLSEGRQAPQGGLE P GSPP LSGSGDAPAGNGGGRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQ ARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA
Sbjct:   17 NLEQEELGSRLGNQGGRRQSAVYWEDASASEFGVNVNGRGTDDDTDNLGYVHRFPDLLKRWDDVDGDRGTWYEKMKRRLLRVEMERRRSEDMRRERERTGKTADDIRAASSRSRLAHAGFRRPPERMASIMRVGGGGVGEDCADDFAADRSKEAPALGRLSEGRQAPQGGLETPIGSPPVLSGSGDAPAGNGGGRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQ-ARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 310          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE)

HSP 1 Score: 557 bits (1435), Expect = 8.540e-193
Identity = 282/295 (95.59%), Postives = 286/295 (96.95%), Query Frame = 0
Query:    1 NLEQEELGSRLGNQGGRRQSAVYWEDASASEFGFNVNGRGTDDNTDNLGYVLRFPDLLKRWDDVDGDRGTWYEKMKRRVLRVEMERRRSEDMRRERERTGKTADDIRAASSRSRLAHAGFRRPLERMVSIMRVGGGGVGEDCADEFAADKSKEAPALGRLSEGRQAPQGGLEAPTGSPPTLSGSGDAPAGNGGGRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 295
            NLEQEELGSRLGNQGGRRQSAVYWEDASASEFGFNV+GRGTDD+TD LGYV RFPDLLKRWDDVDGDRGTWYEKMKRRVLRVEMERRRSEDMRRERERTGKTADDIRAASSRSRLAHAGFRRPLERM SIM VGGGGVGEDCADEFAAD+SKEAPALGRLSEGRQAPQGGLE P GS P +SGSGDAPAGNGGGRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQ ARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA
Sbjct:  481 NLEQEELGSRLGNQGGRRQSAVYWEDASASEFGFNVSGRGTDDDTDKLGYVHRFPDLLKRWDDVDGDRGTWYEKMKRRVLRVEMERRRSEDMRRERERTGKTADDIRAASSRSRLAHAGFRRPLERMASIMHVGGGGVGEDCADEFAADRSKEAPALGRLSEGRQAPQGGLETPIGSSPVVSGSGDAPAGNGGGRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQ-ARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 774          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: A0A835ZBX5_9STRA (IRK_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.670e-32
Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 0
Query:  198 LNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 295
            ++A  WFA+EER+AI A+++DRELEVVVI+EG DTSTGSTVQ  R+SY  ++++WD     CVT+  DG C VDF KFHD   AP +C D GF+QSYA
Sbjct:    1 MDAKLWFAQEERRAIAAFVKDRELEVVVIVEGIDTSTGSTVQ-CRYSYAVDNMVWDHAIGPCVTKDADGKCVVDFLKFHDVRAAPPDCIDSGFVQSYA 97          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: A0A7S3HDT6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDT6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 9.170e-17
Identity = 41/104 (39.42%), Postives = 64/104 (61.54%), Query Frame = 0
Query:  195 RARLNAGQW----FAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRGE-DGACEVDFSKFHDTLRAPANCDDHGFIQS 293
            +A  ++G W    +  EE+  +  Y++DR++E++VI+EG D +TG  VQ ARHSY   +I+WD++F CCV +   DG   +DFSKFH     P++    G + S
Sbjct:  127 QAAPDSGNWSSYTWQEEEQSMVQRYLRDRQVEIIVIVEGVDAATGGMVQ-ARHSYTSSEIMWDKSFECCVEKDPVDGCTTIDFSKFHQLCDVPSDAPFAGVVHS 229          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: A0A7S1UC37_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC37_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.130e-16
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 0
Query:  208 ERKAIDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 295
            E++A+  +++DRELE+VV++EG D  T  T+Q ARHSY W++I +D+TFA CV R  +G C VDF+ FH  +  P   D  G I S+A
Sbjct:  138 EKEALREFLEDRELEIVVLVEGIDALTSCTLQ-ARHSYRWDEIEFDKTFAECVFRSAEGNCVVDFTDFHRLVDCPPCNDSFGPIPSHA 224          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: A0A485LG44_9STRA (Aste57867_20860 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG44_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.550e-12
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  209 RKAIDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRG-EDGACEVDFSKFHDTLRAPANC 285
            ++ I+ +++  ELEV+VILEGTD++TG+T+Q AR SY   DI W+ TFA CV+R  E     +DF KFHD   AP +C
Sbjct:  328 QEQIERHLKQSELEVLVILEGTDSTTGNTMQ-ARFSYATYDIKWNHTFARCVSRHPETKGALIDFDKFHDVRPAPLDC 404          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: A9UNU4_MONBE (Uncharacterized protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UNU4_MONBE)

HSP 1 Score: 75.1 bits (183), Expect = 1.630e-11
Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 0
Query:  209 RKAIDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDD 287
            ++ I +++    +E++ I+EG D  T +TVQ ARHSY + DI++D  FA CVT+G DGAC++D   FHD +  PA  D+
Sbjct:  400 KEMIRSHLMKNNVEIIAIIEGVDPHTAATVQ-ARHSYTYRDIVFDHAFAPCVTKGSDGACQLDMYFFHDLV--PAGPDE 475          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: A0A7R9ZSS9_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSS9_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.930e-11
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 0
Query:  212 IDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTR-----GEDG------------------ACEVDFSKFHDTLRAPANCDDHGFI 291
            + A++QDR  E+VV++EGTD  TG+ VQ ARHSY   D+ W++TF  C+       GEDG                    +VDFSKFHD +  P +C+   ++
Sbjct:  206 LKAFLQDRLAEIVVLVEGTDEGTGAPVQ-ARHSYTLYDLAWNKTFVSCIAPSMEDVGEDGNDGGWRLPLRQHSTEADNVVQVDFSKFHDIVDTPLDCESCAYV 307          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: A0A6G0WDP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDP0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.360e-11
Identity = 42/76 (55.26%), Postives = 52/76 (68.42%), Query Frame = 0
Query:  212 IDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRGE--DGACEVDFSKFHDTLRAPANC 285
            I+ ++   ELEVVVILEGTD++TG+T+Q AR SY   DI W  TFA CV+R    +GA  VDF KFHD   AP +C
Sbjct:  329 IEKHLAQSELEVVVILEGTDSTTGNTMQ-ARFSYTSHDIKWHHTFARCVSRHPTTNGAL-VDFDKFHDLSPAPLDC 402          
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Match: W4FPE5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPE5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.130e-11
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
Query:  212 IDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDILWDRTFACCVTRGE-DGACEVDFSKFHDTLRAPAN 284
            I+ +++  ELEVVVILEGTD++TG+T+Q AR SY   D+ W+ TFA CV+R        +DF KFHD   APA+
Sbjct:  330 IERHLRRSELEVVVILEGTDSTTGNTMQ-ARFSYTAHDMSWNHTFARCVSRDPVTNGAHIDFDKFHDLRAAPAD 402          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16235.4522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEB6_ECTSI8.910e-20195.93IRK_C domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8M2_9PHAE8.540e-19395.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBX5_9STRA3.670e-3259.18IRK_C domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S3HDT6_9STRA9.170e-1739.42Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1UC37_9STRA2.130e-1647.73Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A485LG44_9STRA7.550e-1250.00Aste57867_20860 protein n=1 Tax=Aphanomyces stella... [more]
A9UNU4_MONBE1.630e-1144.30Uncharacterized protein n=1 Tax=Monosiga brevicoll... [more]
A0A7R9ZSS9_9STRA1.930e-1137.86Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A6G0WDP0_9STRA3.360e-1155.26Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FPE5_9STRA6.130e-1151.35Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016449Potassium channel, inwardly rectifying, KirPRINTSPR01320KIRCHANNELcoord: 221..241
score: 48.77
coord: 268..282
score: 39.54
IPR016449Potassium channel, inwardly rectifying, KirPANTHERPTHR11767INWARD RECTIFIER POTASSIUM CHANNELcoord: 204..286
IPR013518Potassium channel, inwardly rectifying, Kir, cytoplasmicGENE3D2.60.40.1400coord: 210..289
e-value: 9.5E-20
score: 72.8
IPR041647Inward rectifier potassium channel, C-terminalPFAMPF17655IRK_Ccoord: 216..280
e-value: 3.0E-12
score: 46.5
NoneNo IPR availablePANTHERPTHR11767:SF103coord: 204..286
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 217..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16235contigEcto-sp13_S_contig16235:496..2677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16235.4522.1mRNA_Ecto-sp13_S_contig16235.4522.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16235 496..2677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16235.4522.1 ID=prot_Ecto-sp13_S_contig16235.4522.1|Name=mRNA_Ecto-sp13_S_contig16235.4522.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp
NLEQEELGSRLGNQGGRRQSAVYWEDASASEFGFNVNGRGTDDNTDNLGY
VLRFPDLLKRWDDVDGDRGTWYEKMKRRVLRVEMERRRSEDMRRERERTG
KTADDIRAASSRSRLAHAGFRRPLERMVSIMRVGGGGVGEDCADEFAADK
SKEAPALGRLSEGRQAPQGGLEAPTGSPPTLSGSGDAPAGNGGGRARLNA
GQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQQARHSYCWEDI
LWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016449K_chnl_inward-rec_Kir
IPR013518K_chnl_inward-rec_Kir_cyto
IPR041647IRK_C
IPR014756Ig_E-set