prot_Ecto-sp13_S_contig16234.4521.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16234.4521.1
Unique Nameprot_Ecto-sp13_S_contig16234.4521.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length582
Homology
BLAST of mRNA_Ecto-sp13_S_contig16234.4521.1 vs. uniprot
Match: A0A6H5J7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K3_9PHAE)

HSP 1 Score: 454 bits (1169), Expect = 1.890e-145
Identity = 359/476 (75.42%), Postives = 369/476 (77.52%), Query Frame = 0
Query:   91 MPNLDFSPVGPQQPPLHDRGSGEKENTDAASSPPVGSFTKKAAVAAAGSTVVRSPLESLTAGTSIVCKRDSTCKCPDCDMAAAVFGINDLRQVSGGGGIPSSPTAGVIPPPSGDGSLARSPLAGRG--DVARDDPDGALPTWTPAPAVEGEGRQEAAVMLPKPAVAVIDSPAAPPVPDSAARDVPPNAKKADMTATSSALDDERDAAFHEQPGESCGGASETAAGGETPSAARGSK---KKGWGFRMARAVFSPLSPRKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPLVETKAESTATAKPAAVSEPAAXXXXXXXXXXXXLVPPADNEMPSSACAGMGNGGKHGNTGAADCNDDLLSGDESAQGEEDQGPVEYEEGDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMDVFLGERXXXXXXXXXXXXXSGRRLSKDRFFECSSEV 561
            MPNL FSPVGPQ PPLHDRGSGEKEN   ASSPPVGS TKKA VAAAGSTVVRSPLESLTAGTSIVCKRDSTCKCPDCDMAAAVFGINDLRQV+GGGGIPSSPTA  IPPPS   +LARSPLAG    DVARDDPDGALPTWTPAPAVEGEG QEAAVM PKPAVA +DSPAAPPVPDSAARDVPP+ KKAD+TA  SA  DERDAA H+QPGES GGASETAAGGETP+AA       KKGWGFRMARAVFSPLSPRK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VPPLVET      T +PAA            XXXXXXL PPADNE+PSSA AGMG+GGKHGNTGAAD NDDLLSGD                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                GMDVFLGER             SGRRLSKDRFFECSSEV
Sbjct:    1 MPNLAFSPVGPQHPPLHDRGSGEKENAHTASSPPVGSVTKKATVAAAGSTVVRSPLESLTAGTSIVCKRDSTCKCPDCDMAAAVFGINDLRQVAGGGGIPSSPTASGIPPPSXXXALARSPLAGGASRDVARDDPDGALPTWTPAPAVEGEGLQEAAVMPPKPAVAGVDSPAAPPVPDSAARDVPPSVKKADVTAMPSAPADERDAAVHKQPGESSGGASETAAGGETPAAASAKSAGSKKGWGFRMARAVFSPLSPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VPPLVET------TVEPAAXXX---------XXXXXXLAPPADNEIPSSAGAGMGDGGKHGNTGAADGNDDLLSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPRDSNDTATGGAACGGMDVFLGERSAAAARRAS----SGRRLSKDRFFECSSEV 456          
BLAST of mRNA_Ecto-sp13_S_contig16234.4521.1 vs. uniprot
Match: D7FRV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV0_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 4.120e-138
Identity = 357/480 (74.38%), Postives = 366/480 (76.25%), Query Frame = 0
Query:   91 MPNLDFSPVGPQQPPLHDRGSGEKENTDAASSPPVGSFTKKAAVAAAGSTVVRSPLESLTAGTSIVCKRDSTCKCPDCDMAAAVFGINDLRQVSGGGGIPSSPTAGVIPPPSGDGSLARSPLAGRG--DVARDDPDGALPTWTPAPAVEGEGRQEAAVMLPKPAVAVIDSPAAPPVPDSAARDVPPNAKKADMTATSSALDDERDAAFHEQPGESCGGASETAAGGETPSAAR----GSKKKGWGFRMARAVFSPLSPRKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPLVETKAESTATAKPAAVSEPAAXXXXXXXXXXXXLVPPADNEMPSSACAGMGNGGKHGNTGAADCND---DLLSGDESAQGEEDQGPVEYEEGDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMDVFLGERXXXXXXXXXXXXXSGRRLSKDRFFECSSEV 561
            MPNL FSPVGPQQPPLHDRGSGEKEN +AASSPPVGS TKKAAVA AGSTVVRSPLESL AGTSIVCKRDSTCKCPDCDMAAAVF INDLRQV GGGGIPSSPTAG IPPPSG          G    DVARDD DGALPTWTPAPA EGEGRQEAAVM PKPAVAV+DSPAA PVPDSAAR+VP NAKKADMTATSSA D E DAA H+QPGESCGGASETAAGGETP+AA     GSKKKGWGFRMARAVFSPLSPR+KQ                                   PPLVET  E +ATA          XXXXXXXXXXXX     DNE+PSSA AGMG GGKHGNTGAAD ND   DLLSGDESA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MDVFLGERXXXXXXXXXXXX SGRRLSKDR+FECSSEV
Sbjct:    1 MPNLAFSPVGPQQPPLHDRGSGEKENANAASSPPVGSITKKAAVAPAGSTVVRSPLESLAAGTSIVCKRDSTCKCPDCDMAAAVFDINDLRQVGGGGGIPSSPTAGGIPPPSGVXXXXXXXXXGGASRDVARDDHDGALPTWTPAPAGEGEGRQEAAVMPPKPAVAVVDSPAASPVPDSAARNVPHNAKKADMTATSSAPDGEHDAAVHKQPGESCGGASETAAGGETPAAASAKSAGSKKKGWGFRMARAVFSPLSPRRKQQGDAGGDGKSGTTAALAGELDDEATAAAAG----APPLVETTVELSATAXXXXXXX---XXXXXXXXXXXXXXXXXDNEIPSSAGAGMGAGGKHGNTGAADGNDGNDDLLSGDESAXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVFLGERXXXXXXXXXXXX-SGRRLSKDRYFECSSEV 470          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16234.4521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7K3_9PHAE1.890e-14575.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRV0_ECTSI4.120e-13874.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16234contigEcto-sp13_S_contig16234:472..3141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16234.4521.1mRNA_Ecto-sp13_S_contig16234.4521.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16234 472..3141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16234.4521.1 ID=prot_Ecto-sp13_S_contig16234.4521.1|Name=mRNA_Ecto-sp13_S_contig16234.4521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=582bp
RRSLLYPRRARERKRERTEEEKGSTHTTELCLCFRTGLVRSSLAIEEATS
QELRGRQGDRARKKAIADIAICEAAGTRSNSDTIWEPFQNMPNLDFSPVG
PQQPPLHDRGSGEKENTDAASSPPVGSFTKKAAVAAAGSTVVRSPLESLT
AGTSIVCKRDSTCKCPDCDMAAAVFGINDLRQVSGGGGIPSSPTAGVIPP
PSGDGSLARSPLAGRGDVARDDPDGALPTWTPAPAVEGEGRQEAAVMLPK
PAVAVIDSPAAPPVPDSAARDVPPNAKKADMTATSSALDDERDAAFHEQP
GESCGGASETAAGGETPSAARGSKKKGWGFRMARAVFSPLSPRKKQQGDS
TTAAAGGKSGTTAALAGKLDDEATAAAAGGVPPLVETKAESTATAKPAAV
SEPAALAAASEPAAAAELVPPADNEMPSSACAGMGNGGKHGNTGAADCND
DLLSGDESAQGEEDQGPVEYEEGDAAAAAIGGGTCKPPVVGNTAVAASVS
SSSSSSIPGDSNDTANGGAACGGMDVFLGERSAAAAAAAARRASSGRRLS
KDRFFECSSEVRREPSDQPRLSPRGKQAMGRV
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