prot_Ecto-sp13_S_contig16218.4518.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16218.4518.1
Unique Nameprot_Ecto-sp13_S_contig16218.4518.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length225
Homology
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: D7FVT2_ECTSI (RNase_PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT2_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 3.520e-133
Identity = 215/224 (95.98%), Postives = 217/224 (96.88%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETLR 224
            GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAK+LRMER EGATLDVSFKPESG TS ADAESEALLRRSLEEVVLRSRYPRTVVSVIIQ VIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITA VSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSC AVGSMS EEYFACCEAASLGTTAVRSFVRLSAEQKVNREAET+R
Sbjct:    8 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSLRMERSEGATLDVSFKPESGITSSADAESEALLRRSLEEVVLRSRYPRTVVSVIIQ-VIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITATVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCHAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETVR 230          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: A0A835ZF16_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA)

HSP 1 Score: 174 bits (441), Expect = 7.760e-51
Identity = 110/236 (46.61%), Postives = 149/236 (63.14%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVS------------GRSVL-LDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETL 223
            GR  +QIR L A+QGILNRADGS RF  GNTSVL AVYGPA     + E+P+ A ++VS++ + G  + ADAE E  +RR+LEE V  +RYPR+V+SV++Q V+ DDG+VLSAA+NA  MAL++AGVEM GM ++ T C + + S            G S L LDP  +EE    AT ++A L+   G+L+ +  G +  EE FA  EAA     AV  ++R + E KV R+   L
Sbjct:    9 GRTGDQIRGLFADQGILNRADGSVRFGAGNTSVLVAVYGPAQPAQQKKEKPDRAIIEVSWRADKGAQTSADAERELYVRRTLEEAVAVARYPRSVISVVVQ-VLCDDGSVLSAAINACAMALVDAGVEMIGMPVAATACFSGSGSAAAAAPEQLQHLGESHLQLDPSASEEATTRATVMLAVLAGSDGILTMKMTGQLGAEELFAASEAARKACDAVSVYLRRAVEAKVLRDVANL 243          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: A0A067CJ13_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ13_SAPPC)

HSP 1 Score: 169 bits (429), Expect = 2.770e-49
Identity = 101/218 (46.33%), Postives = 137/218 (62.84%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQKVNR 218
            GR   +IRPLA EQG+LNRADGSARF  G TSVLA+V GPA AK  R E+  GATL+V+FK E G  S  D E E +LR + E +++   +PR VVS+ +Q V+ DDGA+L+ A+NA  +AL++AGV M  +  ++TC I   +    + LDP ++E   AAAT   A      G+L+    G +S E+YFAC E       +V +FVR+S E K N+
Sbjct:   10 GRLVQEIRPLACEQGLLNRADGSARFNHGTTSVLASVSGPAAAKLRRQEKATGATLEVTFKAEKGAPSARDKEYEMILRETFEPIIVLENFPRAVVSITVQ-VVEDDGALLAVAINAVNLALIDAGVPMRSIVGAITCSI---LEDGQLCLDPSRSEGETAAATVTTACCGNNDGILTSMTSGVLSEEQYFACSEICRRAIDSVLAFVRISQESKFNK 223          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: A0A1V9ZII6_9STRA (Exosome component Rrp46 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZII6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.470e-48
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQK 215
            GR   +IRPLA EQG+LNRADGS+RF  G TSVLA+V GPA AK  R E+   ATL+V FKPE G  S  D E E +LR++ E ++L   +PR V+SV +Q V+ DDGA+L+ A+NA  +ALL+AGV M G+  ++TC I   +    + LDP  +E   AAAT   A+     GVL+    G ++  +YFAC E    G  +V +FVR++ E K
Sbjct:   11 GRLVQEIRPLACEQGLLNRADGSSRFNHGTTSVLASVSGPAAAKLRRQEKMHCATLEVVFKPEKGAASARDKEYEMILRQTFEPIILLENFPRAVISVTVQ-VVEDDGALLAVAINAVNLALLDAGVPMRGIVGAITCTI---LEDGQLCLDPSLSEGEAAAATVTTASCGNSDGVLTSMTSGVLTEAQYFACSEICRRGIDSVLAFVRIAQETK 221          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: A0A485KL27_9STRA (Aste57867_8748 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL27_9STRA)

HSP 1 Score: 164 bits (414), Expect = 5.490e-47
Identity = 99/221 (44.80%), Postives = 135/221 (61.09%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAE 221
            GR   +IRPL+ EQG+LNRADGSARF  G TSVLA+V GPA AK  R E+ + ATL+V FK E G  +  D E EA+LR++ E +V    YPR V+S+ +Q V+ DDG++L+ A+NA  +ALL+AG+ M  +  ++TC I   +    + LDP + E   AAAT   A      G+L+    G +S  +YFAC E       +V SFVR+S E K  +  E
Sbjct:   11 GRLVQEIRPLSCEQGLLNRADGSARFSHGTTSVLASVNGPAAAKIRRQEKVDEATLEVVFKAEKGAPTARDKEYEAILRQTFEPIVYLENYPRAVISITVQ-VVEDDGSLLAVAINAVNLALLDAGIPMRCLVGAITCSI---LEDGQLCLDPARVEGETAAATVTSACAGNNDGILTSLTTGMLSESQYFACSEICRRAVDSVLSFVRISQETKFQKALE 227          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: A0A024TBK6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TBK6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.120e-41
Identity = 90/220 (40.91%), Postives = 133/220 (60.45%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQKVNREA 220
            GR   +IRPL+ EQG+LNRADGSARF  G+TSVLA+V GPA AK  R E+ + AT++V FK + G  +  D E EA+L+++ + +V    YPR V+S+ +Q V+ DDG++L+ A+NA  +ALL+AG+ M  +  ++TC I   +    + LDP   E   A A+   A      G+L+    G ++  +YFA  E       +V SFVR++ E K  + A
Sbjct:   13 GRLVQEIRPLSCEQGLLNRADGSARFCHGSTSVLASVNGPAAAKIRRHEKVDAATVEVVFKSDKGAPTARDKEYEAILKQTFDPIVYVENYPRAVISITVQ-VVEDDGSLLAVAINAVNLALLDAGIPMRSLVGAITCSI---LDDGQLCLDPSLTEGDAATASVTAAYAGKNDGILTSITTGLVNESQYFAASEICRRAIDSVLSFVRIAQESKFQKNA 228          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: A0A1V9ZVY3_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVY3_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.650e-40
Identity = 92/215 (42.79%), Postives = 132/215 (61.40%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQK 215
            GR   +IRPLA EQG+LNRADGSARF  G TSV+A+V GPAPAK  R E    ATLDV FK E G  +  D E E +LR++ E ++L   +PRTV+S+ +Q V+ DDG++L+ ++NA  +AL++AG+ M  +  ++TC +   +    + +DP   E   A AT   A  +    +L+    G ++ E+YFAC E       +V +FVR+S E K
Sbjct:  507 GRSVQEIRPLACEQGLLNRADGSARFNHGTTSVMASVSGPAPAKIRRQENVNQATLDVVFKAEKGVATARDKEYELILRQTFEPIILLENFPRTVISITVQ-VVEDDGSLLAVSINAINLALMDAGIPMRSVVGAITCSV---LEDSQLCIDPSLVENDTATATVTTACSANNHQILTSFTSGILTEEQYFACSEICRRAIDSVIAFVRISQESK 717          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: A0A6G0WBP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBP6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 4.620e-40
Identity = 93/215 (43.26%), Postives = 127/215 (59.07%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQK 215
            GR   +IRPL+ EQ +LNRADGSARF  G +SVLA+V GPA AK  R E+   A+L+V+FK E G  +  D E EA+LR++ E ++    +PR V+SV +Q V+ DDG++LS A+NA  +ALL+AG+ M  +  +VTC I   +      LD    E   A A+   A      G+L+    G +S   YFAC E       +V SFVR+S E K
Sbjct:   12 GRLVQEIRPLSCEQSLLNRADGSARFSHGTSSVLASVNGPAAAKIRRQEKVSCASLEVTFKAEKGAPTARDKEYEAILRQTFEPIIYLENFPRAVISVTVQ-VVEDDGSLLSVAINAMNLALLDAGIPMRCLVGAVTCSI---LDDGQFCLDSSLTEGEAAVASVTSACAGNNDGILTSLTTGVLSESHYFACSEICRRAVGSVLSFVRISQETK 222          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: K3WUR4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUR4_GLOUD)

HSP 1 Score: 144 bits (362), Expect = 2.930e-39
Identity = 90/220 (40.91%), Postives = 132/220 (60.00%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQKVNREA 220
            GR  N++RP A++QG L RADGSAR   GN++VLAAVYGP  AK  R E  E ATLDV FK E G  +  + E E ++R++ E V++   +PR V+S+++Q +       LS A+NA ++ALL+AGV M  +  S TC +   +   ++ LDP  AEE  + +    A  S   GVL+    G ++ E+YFAC EA    + +V +F+R+  ++K   EA
Sbjct:   10 GRAGNELRPFASDQGALFRADGSARMSHGNSTVLAAVYGPGQAKNRRNEHIEKATLDVCFKLEKGQLTSKEKEYEQIIRQTFEPVIVADDFPRAVISIVVQHL-------LSVAINAVSLALLDAGVPMLSIVTSATCGL---LPDGNLFLDPSLAEEELSTSLVTTACSSTNDGVLTSLTKGLLTEEQYFACSEACQRASESVHAFLRIVQQKKYPIEA 219          
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Match: Q54Q83_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54Q83_DICDI)

HSP 1 Score: 143 bits (360), Expect = 9.340e-39
Identity = 84/216 (38.89%), Postives = 136/216 (62.96%), Query Frame = 0
Query:    1 GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLGTTAVRSFVRLSAEQKV 216
            GR  N IRP+ +EQG LN+ADGSA+F Q  + VLAAVYGP    + R E+   + ++V+F P  G T+  D E E L++ ++E ++L + YPRT +SVI+Q V  DDG+++S A+NAA +ALL+AG+EM G+  SVT C     +  S+ +DP   EE  + A A+ +  S    ++  + +G+++ ++YF   + AS     + SF++L+ + ++
Sbjct:   10 GRCENSIRPVESEQGSLNKADGSAKFSQDKSKVLAAVYGPIEVNSARKEKILKSYVEVTFTPAFGNTNYIDKEKELLIKNAVESMILTTLYPRTQISVILQ-VFSDDGSIVSCAINAACLALLDAGIEMNGLLGSVTLCFN---NDGSIYVDPSTEEENQSKAIAIYSFSSINKNIVLSKTIGTLTEDQYFKGLDKASESCDLIISFIKLAVKNRI 221          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16218.4518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT2_ECTSI3.520e-13395.98RNase_PH domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZF16_9STRA7.760e-5146.61Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A067CJ13_SAPPC2.770e-4946.33Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZII6_9STRA6.470e-4846.98Exosome component Rrp46 n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KL27_9STRA5.490e-4744.80Aste57867_8748 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024TBK6_9STRA2.120e-4140.91Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A1V9ZVY3_9STRA1.650e-4042.79U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax... [more]
A0A6G0WBP6_9STRA4.620e-4043.26Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
K3WUR4_GLOUD2.930e-3940.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
Q54Q83_DICDI9.340e-3938.89Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..223
e-value: 1.5E-52
score: 180.4
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 6..128
e-value: 9.4E-21
score: 74.7
NoneNo IPR availablePANTHERPTHR11953:SF1EXOSOME COMPLEX COMPONENT RRP46coord: 1..218
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 1..218
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 131..216
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 5..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16218contigEcto-sp13_S_contig16218:2332..3963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16218.4518.1mRNA_Ecto-sp13_S_contig16218.4518.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16218 2332..3963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16218.4518.1 ID=prot_Ecto-sp13_S_contig16218.4518.1|Name=mRNA_Ecto-sp13_S_contig16218.4518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
GRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMER
PEGATLDVSFKPESGTTSPADAESEALLRRSLEEVVLRSRYPRTVVSVII
QQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAAVSGRSVL
LDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSHEEYFACCEAASLG
TTAVRSFVRLSAEQKVNREAETLR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR036345ExoRNase_PH_dom2_sf
IPR020568Ribosomal_S5_D2-typ_fold