prot_Ecto-sp13_S_contig16217.4517.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16217.4517.1
Unique Nameprot_Ecto-sp13_S_contig16217.4517.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16217.4517.1 vs. uniprot
Match: D7FH60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH60_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 8.080e-33
Identity = 59/72 (81.94%), Postives = 61/72 (84.72%), Query Frame = 0 
Query:    1 MGTADAALYPTIMVSDCARHPAFIDEDSVWFRQNCFDCEERSAIGKVTVTTETCPCSRYTFKRTSHAHAMTT 72
            MGTADAALYP I VSDCARHPAFI+EDSVWF Q C DCEERS IGKVTVTTE CPCS  TF+RTS A AMTT
Sbjct:  176 MGTADAALYPMIKVSDCARHPAFINEDSVWFGQECLDCEERSTIGKVTVTTERCPCSNKTFERTSQAQAMTT 247
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16217.4517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH60_ECTSI8.080e-3381.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16217contigEcto-sp13_S_contig16217:1192..3163 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16217.4517.1mRNA_Ecto-sp13_S_contig16217.4517.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16217 115..3441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16217.4517.1 ID=prot_Ecto-sp13_S_contig16217.4517.1|Name=mRNA_Ecto-sp13_S_contig16217.4517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
MGTADAALYPTIMVSDCARHPAFIDEDSVWFRQNCFDCEERSAIGKVTVT
TETCPCSRYTFKRTSHAHAMTTPPRPPT*
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