prot_Ecto-sp13_S_contig16211.4515.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16211.4515.1
Unique Nameprot_Ecto-sp13_S_contig16211.4515.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length411
Homology
BLAST of mRNA_Ecto-sp13_S_contig16211.4515.1 vs. uniprot
Match: D8LME4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME4_ECTSI)

HSP 1 Score: 599 bits (1544), Expect = 1.010e-198
Identity = 342/413 (82.81%), Postives = 348/413 (84.26%), Query Frame = 0
Query:    1 RATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEELTELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFRQGLGRRAMECRGLLRGLLLWDRTGSASGELACIISSLDGPHPSALKPATAAAAATGLPPASAAVENSAANAGFLEEGETAAFLLPRESAEAGNRGVELQWLFTGRISEAEARADREARGLSSAGPGVEGVVAREGTPRREPRPPILRARFSAARVVYLQRFTMEQAREEXXXXXXXICLIPQLCLFRPPLXXXXXXXXXXPTTPSEDTRRGKRDGTGGDSPSAAAVPPDTAAQASGKRRGRALGVXXXXXXXXXXXXXXXXXGS--EWEEGEPTDFVYTGLFPGEAKGWGGREGEEEEEPVLLFEDETVEDGQ 411
            RATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEELTELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFRQGLGRRAMECRGLLRGLLLWDRTGSASGELACIISSLDGPHPSALKPATAAAA      ASA VE SAA+A FLE G+ AAFLLPR SAEAGNRGVELQWLFTGRISEAEARADREARG+SSAGP VEGV AREGTP REPRPPILRARFSAARVVYLQRFTMEQ              IP+LCLFRPPL          PTTPSEDTR G       DSPSAAA+PP TAAQASGKRRGRALGV          XXXXXXX    EWEEGEPTDFVYTGLFPGEAKGWGGREGEEEE  +LLFEDE VEDGQ
Sbjct:  285 RATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEELTELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFRQGLGRRAMECRGLLRGLLLWDRTGSASGELACIISSLDGPHPSALKPATAAAAXXXXXXASAPVEGSAADAEFLEGGDRAAFLLPRGSAEAGNRGVELQWLFTGRISEAEARADREARGISSAGPVVEGVAAREGTPGREPRPPILRARFSAARVVYLQRFTMEQ--------------IPRLCLFRPPLRRRLQPAAGNPTTPSEDTRSG-------DSPSAAALPPGTAAQASGKRRGRALGVGLGEGGMGGDXXXXXXXXXXXEWEEGEPTDFVYTGLFPGEAKGWGGREGEEEEPVLLLFEDEAVEDGQ 676          
BLAST of mRNA_Ecto-sp13_S_contig16211.4515.1 vs. uniprot
Match: A0A6H5K463_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K463_9PHAE)

HSP 1 Score: 589 bits (1518), Expect = 4.220e-188
Identity = 353/484 (72.93%), Postives = 359/484 (74.17%), Query Frame = 0
Query:    2 ATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEELTELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFRQGLGRRAMECRGLLRGLLLWDRTGSASGELACIISSLDGPHPSALKPATAAAAATGLPPA-SAAVENSAANAGFLEEGETAAFLLPRESAEAGNRGVELQWLFTGRISEAEARADREARGLSSAGPGVEGVVAREGTPRREPRPPILRARFSAARVVYLQRFTMEQAREEXXXXXXX--------------------------------------------------ICL-----------------------IPQLCLFRPPLXXXXXXXXXXPTTPSEDTRRGKRDGTGGDSPSAAAVPPDTAAQASGKRRGRALGVXXXXXXXXXXXXXXXXXGSEWEEGEPTDFVYTGLFPGEAKGWGGREGEEEEEPVLLFEDETVEDGQ 411
            ATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEELTELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFRQGLGRRAMECRGLLRGLLLWDRTGSASGELACIIS LDGPHPSALKPATAA          SA VE+SAA+AGFLE GETAAFLLPRESAEAGNRGVELQWLF GRISEAE RA+REARGLSSAGPGVE V  REGTP REPRPPILRARFSAARVVYLQRFTMEQAREE                                                         +C                        IP+LCLFRPPL          PTTPSEDTRR K DG  GDSPS AAVPP TAAQASGKRRGRALGV      XXXXXXXXXXX SEWEEGEPTDFVYTGLFPGEAKGWGGR+G EEE PVLLFEDETVEDGQ
Sbjct: 1194 ATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEELTELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFRQGLGRRAMECRGLLRGLLLWDRTGSASGELACIISGLDGPHPSALKPATAAXXXXXXXXXXSAPVESSAADAGFLEGGETAAFLLPRESAEAGNRGVELQWLFAGRISEAEVRAEREARGLSSAGPGVEDVAPREGTPGREPRPPILRARFSAARVVYLQRFTMEQAREEDDGGSVCRRPEDSLCGSPVAALAQKAGLRWVQGCTPKLPERRRMEKACARRPIVMEWVCKDSEFHLPECSDYREGRTDALVFEIPRLCLFRPPLRRRLPPAAGNPTTPSEDTRRRKIDGASGDSPSVAAVPPGTAAQASGKRRGRALGVGLGEGGXXXXXXXXXXXXSEWEEGEPTDFVYTGLFPGEAKGWGGRQGGEEE-PVLLFEDETVEDGQ 1676          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16211.4515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LME4_ECTSI1.010e-19882.81Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K463_9PHAE4.220e-18872.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16211contigEcto-sp13_S_contig16211:631..3859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16211.4515.1mRNA_Ecto-sp13_S_contig16211.4515.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16211 631..3859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16211.4515.1 ID=prot_Ecto-sp13_S_contig16211.4515.1|Name=mRNA_Ecto-sp13_S_contig16211.4515.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=411bp
RATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEEL
TELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFR
QGLGRRAMECRGLLRGLLLWDRTGSASGELACIISSLDGPHPSALKPATA
AAAATGLPPASAAVENSAANAGFLEEGETAAFLLPRESAEAGNRGVELQW
LFTGRISEAEARADREARGLSSAGPGVEGVVAREGTPRREPRPPILRARF
SAARVVYLQRFTMEQAREEDDGGSSSICLIPQLCLFRPPLRRRLPPAAGN
PTTPSEDTRRGKRDGTGGDSPSAAAVPPDTAAQASGKRRGRALGVGLGEG
GMSAGDGGGDGEGSEWEEGEPTDFVYTGLFPGEAKGWGGREGEEEEEPVL
LFEDETVEDGQ
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