mRNA_Ecto-sp13_S_contig16210.4514.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: A0A6H5L0S4_9PHAE (Methyltransf_21 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0S4_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.080e-28 Identity = 56/60 (93.33%), Postives = 56/60 (93.33%), Query Frame = 1
Query: 1 MADLGVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
MADLGVDKIDLLKIDVEG E DVL GIEQQDWPKIKQVVAEVHPVGDRVTRACELL RHG
Sbjct: 844 MADLGVDKIDLLKIDVEGTEFDVLRGIEQQDWPKIKQVVAEVHPVGDRVTRACELLRRHG 903
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: A0A5C2CYN7_9BACT (Condensation domain-containing protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A5C2CYN7_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 4.630e-17 Identity = 39/60 (65.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 1 MADLGVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
+A+ GV +IDLLK+DVE AELDVL GI ++DW KI+QVV EVH VGDR+ R +LGRHG
Sbjct: 1055 VAERGVTRIDLLKLDVEKAELDVLEGIREEDWAKIRQVVMEVHDVGDRLARITGMLGRHG 1114
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: B2ITS1_NOSP7 (Methyltransferase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) TaxID=63737 RepID=B2ITS1_NOSP7) HSP 1 Score: 75.1 bits (183), Expect = 3.280e-16 Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 1
Query: 13 GVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
V +IDLLK++V+ ++LDVLLG+E+QDWPKIKQVV EVH + +RV R ELL ++G
Sbjct: 17 NVQQIDLLKVNVKRSKLDVLLGVEEQDWPKIKQVVVEVHDLDNRVKRITELLQKYG 72
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: A0A1Z4JR34_LEPBY (Methyltransferase FkbM family protein n=2 Tax=Leptolyngbya boryana TaxID=1184 RepID=A0A1Z4JR34_LEPBY) HSP 1 Score: 77.4 bits (189), Expect = 1.220e-15 Identity = 38/58 (65.52%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 7 DLGVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
D V +IDLLKIDVE +ELDVL+GIE QDW KIKQ+ EVH RV R CELL HG
Sbjct: 193 DHSVQQIDLLKIDVERSELDVLMGIEPQDWCKIKQITIEVHDHSQRVDRVCELLKSHG 250
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: A0A1Z4Q5P2_9CYAN (Methyltransferase n=1 Tax=Scytonema sp. NIES-4073 TaxID=2005464 RepID=A0A1Z4Q5P2_9CYAN) HSP 1 Score: 73.2 bits (178), Expect = 1.840e-15 Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 1
Query: 16 VDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
V +IDLLK+DVE +ELDVLLGIE+QDW KIKQVV EVH + R+ + LL HG
Sbjct: 20 VQQIDLLKVDVERSELDVLLGIEEQDWQKIKQVVMEVHNLDGRIEKITALLKEHG 74
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: A0A1Z4R1M3_9CYAN (Methyltransferase FkbM family protein n=1 Tax=Calothrix sp. NIES-4101 TaxID=2005461 RepID=A0A1Z4R1M3_9CYAN) HSP 1 Score: 73.6 bits (179), Expect = 3.560e-15 Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 13 GVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRH 177
+ +IDLLKIDVE +ELDV LGI++QDW KIKQVV EVH + RV + ELL H
Sbjct: 63 NIQQIDLLKIDVEKSELDVFLGIDEQDWQKIKQVVVEVHDIDGRVEKITELLNNH 117
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: UPI000493F90B (FkbM family methyltransferase n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI000493F90B) HSP 1 Score: 74.3 bits (181), Expect = 6.870e-15 Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 MADLGVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
MA+L + IDLLKIDVE +ELDV+ GIE +DW KIKQ++ EVH + DR++ ++L HG
Sbjct: 125 MAELNISAIDLLKIDVEKSELDVIHGIEDRDWEKIKQIIIEVHDISDRISVLTQILYSHG 184
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: UPI0019F22C64 (FkbM family methyltransferase n=1 Tax=Calothrix sp. C42_A2020_038 TaxID=2774333 RepID=UPI0019F22C64) HSP 1 Score: 75.1 bits (183), Expect = 8.920e-15 Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 1
Query: 13 GVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
+++IDL+KIDVE +ELDVLLGIE QDW KIKQVV EVH + +RVT+ +LL ++G
Sbjct: 194 NIEQIDLVKIDVERSELDVLLGIEAQDWQKIKQVVLEVHDLNNRVTKVTDLLMQNG 249
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: A0A1W6N2E1_9HYPH (Uncharacterized protein n=2 Tax=Methylocystis bryophila TaxID=655015 RepID=A0A1W6N2E1_9HYPH) HSP 1 Score: 75.5 bits (184), Expect = 1.740e-14 Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 MADLGVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
+ + GV++IDLLKIDVE AE +VL GIE+ DW KI+Q+V EVH V DR + ELL RHG
Sbjct: 2253 LRETGVERIDLLKIDVENAEFEVLQGIEELDWSKIEQLVVEVHDVDDRRRKILELLRRHG 2312
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Match: A0A6P0WMX0_9CYAN (FkbM family methyltransferase n=4 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0WMX0_9CYAN) HSP 1 Score: 74.3 bits (181), Expect = 1.750e-14 Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 16 VDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTRACELLGRHG 180
+++IDLLKIDVE +ELDVLLGIE QDW K+KQ+V EVH + DR+ + LL HG
Sbjct: 195 IEQIDLLKIDVEKSELDVLLGIEAQDWQKLKQIVVEVHNIEDRLQKITTLLKEHG 249 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16210.4514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16210.4514.1 >prot_Ecto-sp13_S_contig16210.4514.1 ID=prot_Ecto-sp13_S_contig16210.4514.1|Name=mRNA_Ecto-sp13_S_contig16210.4514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp MADLGVDKIDLLKIDVEGAELDVLLGIEQQDWPKIKQVVAEVHPVGDRVTback to top mRNA from alignment at Ecto-sp13_S_contig16210:1365..1894+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16210.4514.1 ID=mRNA_Ecto-sp13_S_contig16210.4514.1|Name=mRNA_Ecto-sp13_S_contig16210.4514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=530bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16210:1365..1894+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16210:1365..1894+ >mRNA_Ecto-sp13_S_contig16210.4514.1 ID=mRNA_Ecto-sp13_S_contig16210.4514.1|Name=mRNA_Ecto-sp13_S_contig16210.4514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=180bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16210:1365..1894+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |