prot_Ecto-sp13_S_contig162.4508.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig162.4508.1
Unique Name	prot_Ecto-sp13_S_contig162.4508.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	1011

Homology

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BLAST of mRNA_Ecto-sp13_S_contig162.4508.1 vs. uniprot
Match: A0A6H5JTZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ5_9PHAE)

HSP 1 Score: 1839 bits (4764), Expect = 0.000e+0
Identity = 906/1010 (89.70%), Postives = 936/1010 (92.67%), Query Frame = 0

Query:    1 MAAGAYTLLAYLLGGTWQGNAAVLIQYEFSQEECRRGVVADVAGGNRFFGELSLDNSTASCLPGVGIERTSASPGSPGASSIGNTTLLREELLNDDSSPGHFSLELWLSVPEMPACDGFCTTPIVTIGEGDTSLDDDCQQNLGMMITYWTETGDFGARFMSVDDECERLWSGAIQPSESMGYALHLVLTVDSIVFFGEPYAYFRWYINGTRVARDLSKDVPPETMMTLWDSDFNLQLLDWSRQIPSSFYTEGPGIKIFYLAIHDETLGTTEILSRYSARINNSTPVVSDTTIGVAEDGEEGDHYEDPHSYLQVFPVSELQMVPLDVYDSDNDPATPNYDNSTSPRVFVNTLPFPGSLVNSSGDDISSVPFEVLGDAGAFAVRYRPNFNDFSTNDSVVYANFSFYATDGESGTRSHTDATVSMYVFSKNDPPEAFKASHGVYAGSRQNIITLNGTDIDTSDDVHGAAIVEPPARGTLFQVFNNGSVSNVAVTNDEPLWRPMVAYEHDSVWLRSNSPTDQTVGDDMFTFKVFDSHWNFSAPAAINITVLSGVSAISQREVWWCFEDVNCEVELFGSTKSDKAGNMSITISGVPVYGNLFDTGINMHVEVGSTISSPVEYPYDEGASVVYQPQMDFFTDPTTQWNGTELLELDNVIVTFYASIELGGARIFSPEVSQELKVRNVDDQSTIRCGDSILQILATGVVDDDAILDDVRPDRLFIYNFSITEKDDGVDPIRVSVTAEYGYLTLNDTLRSRVSFVNPCSGTHNWRCRSDGVYSQNMVFVGAPEDVQHVLNGMLFVSYESNVVDNITVTIHDGFEGDCIWEFATYSVRPSCHSSSCSITINVTETWLNDDRGPALISVTITEFFALFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESKKMEVAATAPTPNYMSTVLNNAHRTPANIPAGRTTKEATSRQVDIKARASRQVGTSPQAWGCPLVGAGWLRRDQRGVGREMNTAQGAPRGVERSSEPPWEDDG 1010
            MAAGAYTLLAYLLGGT Q NAAVLIQYEFSQEECRRGVVADVAGGNRFFG+LSLDNSTASCLPGVGIERTSASPGSPGASSIGNTTLLREELLNDDSSPGHFSLELWLSVPEMPACDGFCTTPIVTIGEGDTSLDDDCQQNLGMMITYWTETGDFGARFMS+DDECERLWSGAIQPSESMGYALHLVLT+DSIVF+GEPYAYFRWYINGTRVARDLSKDVPPETMMTLWDSDFN+QLLDWSRQIPSSFYTEGPGIKIFYLAIHDETL  TEI+SRYSAR+ NSTPVVSDTTIGVAEDGEEGDHYEDP SYLQVFPVSELQMVPLDVYDSDNDPATPNYDNSTSPRVFVNTLPF GSLVNSSGDDISSVPFEVL DAGAFAVRYRP  NDFSTNDSVVYANFSFYATDGESGTRSHT+ATVSMYVFSKNDPP+A  ASHGV+AGSR+N I LNGTD+D  DDVHGAAIVEPPARGTLFQVFNNGSVSNVAVTN+EPLWRPMVAYEHDSVWLRSNSPTDQTVGDDMFTFKVFDSHWNFS PAAINITVLSGVSAISQ E+WWCFEDVNCEV LFGSTKSD AGNMSITISGVPVYGNLFD GINM VEVGST+SSPV+YPYDEGASVVYQPQMDFFTDPTTQWNGT+LLE D+VIVTFYASIELGG RIFSPEVSQELKVRNVDDQS IRCGDSILQ LATGVVDDDAILDDVRPDRLFIYNFSITEKDDGVDP+RVSVTAEYGYLTLNDTLRSRVSFVNPCSGTHNWRCRSDGVYSQNM+F+GAPEDVQHVLNGMLFVSYESNVVDN+TVTIHDGFEGDCIWEFATYSVRP+CHSSSCSITINVTETWLNDD GPALISVTITEFF LF                                     ES KMEVAATAPTPN+MSTVLNNAHRTPANIPAGRTTK A SRQVD +ARASRQVGTSPQA GCPL+G+GWLRRDQRG GRE+ TAQGAPRG+ERS + PWEDDG
Sbjct:    1 MAAGAYTLLAYLLGGTCQSNAAVLIQYEFSQEECRRGVVADVAGGNRFFGDLSLDNSTASCLPGVGIERTSASPGSPGASSIGNTTLLREELLNDDSSPGHFSLELWLSVPEMPACDGFCTTPIVTIGEGDTSLDDDCQQNLGMMITYWTETGDFGARFMSIDDECERLWSGAIQPSESMGYALHLVLTIDSIVFYGEPYAYFRWYINGTRVARDLSKDVPPETMMTLWDSDFNMQLLDWSRQIPSSFYTEGPGIKIFYLAIHDETLDVTEIVSRYSARVTNSTPVVSDTTIGVAEDGEEGDHYEDPQSYLQVFPVSELQMVPLDVYDSDNDPATPNYDNSTSPRVFVNTLPFLGSLVNSSGDDISSVPFEVLEDAGAFAVRYRPILNDFSTNDSVVYANFSFYATDGESGTRSHTNATVSMYVFSKNDPPQALNASHGVFAGSRENFIPLNGTDMDAFDDVHGAAIVEPPARGTLFQVFNNGSVSNVAVTNEEPLWRPMVAYEHDSVWLRSNSPTDQTVGDDMFTFKVFDSHWNFSVPAAINITVLSGVSAISQSEIWWCFEDVNCEVALFGSTKSDNAGNMSITISGVPVYGNLFDAGINMPVEVGSTLSSPVKYPYDEGASVVYQPQMDFFTDPTTQWNGTQLLERDDVIVTFYASIELGGTRIFSPEVSQELKVRNVDDQSAIRCGDSILQTLATGVVDDDAILDDVRPDRLFIYNFSITEKDDGVDPVRVSVTAEYGYLTLNDTLRSRVSFVNPCSGTHNWRCRSDGVYSQNMIFIGAPEDVQHVLNGMLFVSYESNVVDNMTVTIHDGFEGDCIWEFATYSVRPTCHSSSCSITINVTETWLNDDTGPALISVTITEFFVLFALISALGGLVVSKCLKSLKFCLCFCCGRRKHRRSKGGESNKMEVAATAPTPNHMSTVLNNAHRTPANIPAGRTTKGAASRQVDTQARASRQVGTSPQARGCPLLGSGWLRRDQRGAGREITTAQGAPRGIERSGDIPWEDDG 1010

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BLAST of mRNA_Ecto-sp13_S_contig162.4508.1 vs. uniprot
Match: D7G5V9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V9_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 6.980e-17
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0

Query:  479 VFNNGSVSNVAVTNDEPLWRPMVAYEHDSVWLRSNSPTDQT 519
            VFNNGS SNVAVTNDEPLWRPMVAYEHD+VWLRSNSPT+QT
Sbjct:    2 VFNNGSASNVAVTNDEPLWRPMVAYEHDNVWLRSNSPTEQT 42

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig162.4508.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig162.4508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JTZ5_9PHAE	0.000e+0	89.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G5V9_ECTSI	6.980e-17	92.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 864..894
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..863
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 895..1010
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..13
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.5
None	No IPR available	TMHMM	TMhelix		coord: 858..880

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig162	contig	Ecto-sp13_S_contig162:15645..27691 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig162.4508.1	mRNA_Ecto-sp13_S_contig162.4508.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig162 15645..27691 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig162.4508.1 ID=prot_Ecto-sp13_S_contig162.4508.1|Name=mRNA_Ecto-sp13_S_contig162.4508.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1011bp
MAAGAYTLLAYLLGGTWQGNAAVLIQYEFSQEECRRGVVADVAGGNRFFG
ELSLDNSTASCLPGVGIERTSASPGSPGASSIGNTTLLREELLNDDSSPG
HFSLELWLSVPEMPACDGFCTTPIVTIGEGDTSLDDDCQQNLGMMITYWT
ETGDFGARFMSVDDECERLWSGAIQPSESMGYALHLVLTVDSIVFFGEPY
AYFRWYINGTRVARDLSKDVPPETMMTLWDSDFNLQLLDWSRQIPSSFYT
EGPGIKIFYLAIHDETLGTTEILSRYSARINNSTPVVSDTTIGVAEDGEE
GDHYEDPHSYLQVFPVSELQMVPLDVYDSDNDPATPNYDNSTSPRVFVNT
LPFPGSLVNSSGDDISSVPFEVLGDAGAFAVRYRPNFNDFSTNDSVVYAN
FSFYATDGESGTRSHTDATVSMYVFSKNDPPEAFKASHGVYAGSRQNIIT
LNGTDIDTSDDVHGAAIVEPPARGTLFQVFNNGSVSNVAVTNDEPLWRPM
VAYEHDSVWLRSNSPTDQTVGDDMFTFKVFDSHWNFSAPAAINITVLSGV
SAISQREVWWCFEDVNCEVELFGSTKSDKAGNMSITISGVPVYGNLFDTG
INMHVEVGSTISSPVEYPYDEGASVVYQPQMDFFTDPTTQWNGTELLELD
NVIVTFYASIELGGARIFSPEVSQELKVRNVDDQSTIRCGDSILQILATG
VVDDDAILDDVRPDRLFIYNFSITEKDDGVDPIRVSVTAEYGYLTLNDTL
RSRVSFVNPCSGTHNWRCRSDGVYSQNMVFVGAPEDVQHVLNGMLFVSYE
SNVVDNITVTIHDGFEGDCIWEFATYSVRPSCHSSSCSITINVTETWLND
DRGPALISVTITEFFALFALISALGGLIVLKCLKSLKFCLCFCCKRRKRR
RSERVESKKMEVAATAPTPNYMSTVLNNAHRTPANIPAGRTTKEATSRQV
DIKARASRQVGTSPQAWGCPLVGAGWLRRDQRGVGREMNTAQGAPRGVER
SSEPPWEDDG*