prot_Ecto-sp13_S_contig16198.4507.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16198.4507.1
Unique Nameprot_Ecto-sp13_S_contig16198.4507.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length312
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16198.4507.1 vs. uniprot
Match: A0A6H5JBG8_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBG8_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 2.460e-132
Identity = 208/280 (74.29%), Postives = 216/280 (77.14%), Query Frame = 0 
Query:   72 SEQLEPTQEALERXXXXXXXXXXKAEDAVAARDAAEESGRKAREANEKLPKELETVKAGIARALRENEQYQSKARRVTLPRRCREKAQEPDQPKEMAALHFRSMHDEVPFVWLKKHSEVEERPSQIEGHGAFLKHGASKGTIVHTSVLPSSEFNDDFTMEQYDCCYHVMHGDKSGVVY---------------------------------------RAAPPDWYEPTQAGQA-VITSWYTCSLVTRRPVEAGEELTICYAKFPPAWDQGKQGRRSKRKR 311
            S+QL PTQEA ER          KAEDAVAARDAAEESGRKA EANEKL KELETVKAGIARAL EN QY SK RRVTLPRRCREKAQEPDQPKEMAALHFRSMHDEVPFVWLK+H EVEE+PSQIEGHGAFLK GASKGT VHTSVLPSSEF+DDFT+EQYDCCYHVMHGDK+GVVY                                        AAPPDWYEPT+AGQA VITSWYTCSLVTRR VEAGEELTICYAKFPPAWD+GKQ RRSKRKR
Sbjct:    9 SKQLAPTQEAFERERKRVEIEKRKAEDAVAARDAAEESGRKAFEANEKLQKELETVKAGIARALTENGQYISKPRRVTLPRRCREKAQEPDQPKEMAALHFRSMHDEVPFVWLKEHFEVEEKPSQIEGHGAFLKRGASKGTTVHTSVLPSSEFSDDFTIEQYDCCYHVMHGDKNGVVYIDPGALFRGNLMGCLEDMGSRVIRLLNHSSSPNAELCFGGAAPPDWYEPTRAGQAAVITSWYTCSLVTRRRVEAGEELTICYAKFPPAWDKGKQDRRSKRKR 288
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BLAST of mRNA_Ecto-sp13_S_contig16198.4507.1 vs. uniprot
Match: A0A6H5JRX6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRX6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 8.230e-14
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:    1 MIVSALQPSVWPEKASTTAAAGGVVDVAKATFLAAARSAGTVGQSG 46
            MIVSALQPSVWPEKASTTAAAGGV+DVAKA FLAAA SAG VGQSG
Sbjct:  118 MIVSALQPSVWPEKASTTAAAGGVLDVAKAAFLAAAGSAGAVGQSG 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16198.4507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBG8_9PHAE2.460e-13274.29SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JRX6_9PHAE8.230e-1491.30Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..102
NoneNo IPR availableCOILSCoilCoilcoord: 124..144
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 189..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16198contigEcto-sp13_S_contig16198:2316..3645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16198.4507.1mRNA_Ecto-sp13_S_contig16198.4507.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16198 2209..3648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16198.4507.1 ID=prot_Ecto-sp13_S_contig16198.4507.1|Name=mRNA_Ecto-sp13_S_contig16198.4507.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
MIVSALQPSVWPEKASTTAAAGGVVDVAKATFLAAARSAGTVGQSGDDDG
VVVPDVDMSGDFSAVEQPGSDSEQLEPTQEALERERKRVEIERRKAEDAV
AARDAAEESGRKAREANEKLPKELETVKAGIARALRENEQYQSKARRVTL
PRRCREKAQEPDQPKEMAALHFRSMHDEVPFVWLKKHSEVEERPSQIEGH
GAFLKHGASKGTIVHTSVLPSSEFNDDFTMEQYDCCYHVMHGDKSGVVYR
AAPPDWYEPTQAGQAVITSWYTCSLVTRRPVEAGEELTICYAKFPPAWDQ
GKQGRRSKRKR*
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