mRNA_Ecto-sp13_S_contig16184.4503.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: D7G8R3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R3_ECTSI) HSP 1 Score: 670 bits (1728), Expect = 3.030e-236 Identity = 317/328 (96.65%), Postives = 323/328 (98.48%), Query Frame = 1
Query: 64 MWRTHLRAPLFLAVLLPSRVLSMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSLNTLTAGSVTTLTIVADGSSIYDSDAIGYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS 1047
MWRTHL APLFLAVLLPSRVLSMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSG+ACERS+CPRGCSGHGHCRSLSDYAQ YRGDDSIQY YDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEG+PTTDILYDASEADIESAL+AIPD+QGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWS N LTAGSVTTLTIVADGSSIYDSDAIGYTSVKGTKENE+CSNRGICDTQEGICECFTSNDDIFAS
Sbjct: 1 MWRTHLHAPLFLAVLLPSRVLSMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGSACERSSCPRGCSGHGHCRSLSDYAQDYRGDDSIQYLYDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGYPTTDILYDASEADIESALSAIPDIQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSFNALTAGSVTTLTIVADGSSIYDSDAIGYTSVKGTKENEDCSNRGICDTQEGICECFTSNDDIFAS 328
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: A0A6H5KZZ6_9PHAE (EGF-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ6_9PHAE) HSP 1 Score: 547 bits (1409), Expect = 4.050e-191 Identity = 279/382 (73.04%), Postives = 283/382 (74.08%), Query Frame = 1
Query: 178 RCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDV-----------------------WDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSLNTLTAGSVTTLTIVADGSSIYDSDAIGY---------------------------------------------------------------------TSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS 1047
RCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRA GRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQ YRGDDSIQY YDDV WDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEG+PTTDILYDASEADIESAL+AIPD+QGVNV+FSIP SGACSSTAINVIQVEFLGNFGPLRPMWS N LTAGSVTTLTIVADGSSIYDSD IGY TSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS
Sbjct: 7 RCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAAGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQDYRGDDSIQYLYDDVRKSRLGNLHNSIWALLLRFCCQVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGYPTTDILYDASEADIESALSAIPDIQGVNVKFSIPFSGACSSTAINVIQVEFLGNFGPLRPMWSFNALTAGSVTTLTIVADGSSIYDSDVIGYVRHTGGFRRPVKYHDKGMLHTCNVYLGCVLTPREQALTPYFHLLFNSSRLTCLSCRATSFTTPSHWNRYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS 388
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: A0A835YWB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB3_9STRA) HSP 1 Score: 354 bits (908), Expect = 8.190e-113 Identity = 177/319 (55.49%), Postives = 217/319 (68.03%), Query Frame = 1
Query: 127 SMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRG--CSGHGHCRSLSDYAQGYRGD-DSIQYPYDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEF-SIPLSGACSSTAIN--VIQVEFLGNFGPLRPMWSLNTLTA----GSVT--TLTIVADGSSIYDSDAIG-YTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFA 1044
+MC N CS GDCN + +C CW+GW GADCSER C G AWSD A+ATD AH ECSNRG CDR+ GRC CM GF+GAAC+R +C R C+GHG C SL YA+ +R S + Y++VWD++ +H CVCD GY GF+CALR CP GDDPLTTGQVNE+QLVVC G+F L Y+ + I DAS AD+ SAL I ++ V V F S P GAC+ T ++ VI VEF NFG LRPMW ++T GSVT +T++ADGSSI D G + S+KGTKE ECSNRG+CD + G+C CF +NDDIFA
Sbjct: 29 AMCPNRCSMHGDCNQYNQCVCWSGWSGADCSERQCPLGTAWSDDASATDVAHANAECSNRGACDRSSGRCSCMPGFTGAACDRMSCSRDDHCNGHGTCYSLQSYAEHFRSPVTSEAFYYNNVWDANGIHRCVCDEGYTGFNCALRECPVGDDPLTTGQVNEVQLVVCHGIGGAFALVYKDERSGSIAADASAADVRSALLKITSIRDVKVTFLSDPTKGACARTLVDEQVIAVEFTQNFGALRPMWGISTALTPPLGGSVTDPAVTVIADGSSIVDFYGNGPFYSIKGTKEGAECSNRGLCDRESGVCSCFDTNDDIFA 347
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: A0A7S2D5U1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5U1_9STRA) HSP 1 Score: 310 bits (793), Expect = 4.170e-96 Identity = 152/307 (49.51%), Postives = 187/307 (60.91%), Query Frame = 1
Query: 133 CSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSL-NTLTAGSVTTLTIVADGSS-IYDSDAIGYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS 1047
C N CS GDCN + RCDCW W G DCSER+C G+AW+D AT D AH ECSNRG C R+ G C CM GF G AC R+ C C+ G C +L YA Y DS+QY YD++WDS+K+ CVCD Y +DC+ R CPTGDDPLTTGQVNE QL C AT GSF Y G T I A E I AL P + V+V FSI AC + A+N++ +EF NFG L P+ + L+ G T+T+ DGS+ + DSD Y SV G KEN+ECS RG+C +G C C+ +N D + S
Sbjct: 49 CPNLCSGHGDCNIYSRCDCWDEWTGGDCSERICPFGVAWADDATGDDEAHAEAECSNRGVCARSSGECSCMAGFGGKACHRTECTSDCNDVGRCLTLMKYADDYYDTDSVQYTYDEMWDSEKIMGCVCDYPYVNYDCSERECPTGDDPLTTGQVNEQQLFYCTATGGSFAFLYLGEYTDTIKAKAGEVAIADALMTHPRISTVSVSFSITNGTACQTDAVNIVTIEFEQNFGDLSPLVPYTDDLSTGG--TITMSTDGSTALTDSDGTSYVSVTGDKENDECSGRGLCIASDGTCSCYDTNSDTYYS 353
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: A0A7S3XN04_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN04_HETAK) HSP 1 Score: 308 bits (789), Expect = 6.450e-96 Identity = 156/322 (48.45%), Postives = 200/322 (62.11%), Query Frame = 1
Query: 97 LAVLLPSRVLSMC-----------SNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSLNT-LTAGSVTTLTIVADGSSIYDSDAIGYTSVKGTKENEECSNRGICDTQEGICECFTS 1026
+A+ P VLS+C N C+ +G CN + +C+C G+ GADCSE++C G+AW D T DTAH ECSNRG CDR G C CM GF+G+ACER +C C+G G C S +A Y DDS+ Y Y+ WD+DK+ CVCD G+ +DC LR CPTGDDPLTTGQVNE QL C A+ GSFVLYY G P+ I YDA+E ++E+AL I + V+V F S C++ INV+ VEF NFG P+ + L G++T I G ++ D D YTSV GTKEN+ CSNRG CDT G C+CF++
Sbjct: 1 MALAWPFLVLSLCLQVFHHAEGKCHNLCNGKGQCNIYSQCECIEGYQGADCSEKICPFGVAWGDMPTDEDTAHAQAECSNRGICDRTNGDCTCMEGFTGSACERLSCESDCNGAGICLSYRKFAANYLNDDSVGYVYETPWDADKVWGCVCDEGFQNYDCILRECPTGDDPLTTGQVNEKQLFKCTASGGSFVLYYRGKPSDTIAYDATEDEVEAALTYINRLTEVDVSFGTG-SSVCNADDINVVTVEFTQNFGEQPPLVAYTDGLDDGAIT---IKTAGGTLTDDDGTTYTSVTGTKENDVCSNRGTCDTSNGSCDCFST 318
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: A0A7S3HDR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDR3_9STRA) HSP 1 Score: 289 bits (739), Expect = 5.530e-90 Identity = 150/314 (47.77%), Postives = 198/314 (63.06%), Query Frame = 1
Query: 115 SRVLSMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWS-LNTLTAGSVTTLTIVADGSSIYDSDAIG--YTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS 1047
S LS C N C+ G C+ +GRC C A + GADCSER+C G AWSD ATATD AH ECSNRG C+R G+CKCM GFSG++CER +C C+ G C S+ D+A R + S Q+ Y WD+DK+ C CD G+DC+ CP GDDPLT QVNE+QL+ C +TAGSFVLYY G P+ I + A+ A + +AL AIP + V V FS C NV+ VEF FGPL P+ L++ S L I ADG + + +D G ++SVKG+KE+ C+NRG+CD ++G+C C+ +N D++ S
Sbjct: 14 SVALSSCPNHCNSHGVCDKYGRCTCDAEYQGADCSERICPFGHAWSDVATATDVAHAEAECSNRGICNRKNGKCKCMAGFSGSSCERLDCKDQCNDRGICYSMKDFAGRTRNELSQQFTYTSRWDNDKIKGCQCDYPATGYDCSQSLCPVGDDPLTPSQVNEVQLIHCASTAGSFVLYYNGVPSKSIPFTANAAMVRAALEAIPQITEVKVTFSQSHGTICQIKP-NVVSVEFTQQFGPLNPLVPVLDSAFDASGGLLEISADGRTTF-ADVTGQRFSSVKGSKESTVCANRGLCDLKDGVCGCYDTNGDVYGS 325
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: A0A7S3ZRQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRQ3_9STRA) HSP 1 Score: 280 bits (717), Expect = 5.620e-88 Identity = 137/319 (42.95%), Postives = 196/319 (61.44%), Query Frame = 1
Query: 97 LAVLLPSRVLSMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDVWDSDKLHTCVCDTGYHG-FDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSLNTLTAGSVTTLTIVADGSSIY-DSDAIGYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS 1047
L + + + V + C N+C+ +G C+PFGRC C++GW GADC R C T AW+D A++ + AH ECSNRG CD G C+C GF+G AC+ C R C G C S+ ++A +DS Q+ Y+ WD+DK++ CVCD+ Y F+CA R CP+GDDP+T Q NE+Q C AT G+FVL GH + DI E +++AL + V+V +SI AC++ ++NV+++EF +FG L P+ L+ AG T+ + ADG +++ DS + S KGTKE+EECSNRGIC+ + C C +N D F S
Sbjct: 10 LVIFIAAAVDAQCPNNCNLKGKCDPFGRCTCFSGWTGADCGYRKCPTHYAWADVASSDEVAHARAECSNRGLCDEGTGECECAEGFTGKACQHLACDRECGFKGKCVSMRNFASSQYNEDSQQFVYETPWDADKMYGCVCDSPYDAVFNCAFRRCPSGDDPMTPDQKNEVQYFKCMATGGTFVLLMAGHASGDIRTGMKEHQLKAALEQSAAITEVDVTYSIDNGTACTTDSVNVVRIEFTQDFGSLPPLVPLDDDLAG---TIQVSADGQTVFTDSLGADFVSKKGTKEDEECSNRGICNPFDATCLCLDTNGDTFKS 325
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: A0A7S2L1X6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L1X6_9STRA) HSP 1 Score: 280 bits (717), Expect = 3.830e-86 Identity = 144/319 (45.14%), Postives = 200/319 (62.70%), Query Frame = 1
Query: 91 LFLAVLLPSRVLSMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSLNT-LTAGSVTTLTIVADGSSIYDSDAIGYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFA 1044
LFL +++ S L C N CSR G CN GRCDC AG+ +DCSER+C + +++D A+A D AH ECS RG C+R G C+CM GF+G ACER+ C C+G+G C S D+ + S QY Y +WD+DK++ C+CD GY G+DC+LR C +GDDP+T G E+QL+ C A +G FVL GH + I ASE DIE+ALA+I +V FS S C S N++ + FL FGP+ P+ S + + +G+ + + G+ I D +++ + VKGTKEN ECSNRGIC+ G+CECF+ N + +A
Sbjct: 31 LFLPLVVIS-TLGQCHNKCSRHGSCNTEGRCDCHAGFRSSDCSERICPSSQSFNDPASALDVAHQNEECSGRGLCNRTSGDCQCMEGFTGIACERTVCRSDCNGNGKCMSYRDFGMNAFNELSKQYVYTTIWDADKIYGCLCDYGYSGYDCSLRMCTSGDDPMTPGGDQEMQLLRCSADSGHFVLQLNGHYSNKIPISASEVDIENALASITGAGRTSVTFSEG-SIVCRSDVANIVSITFLDIFGPVPPLLSSDIDMNSGAFVIVGVDPSGAMI-DENSVTHVPVKGTKENAECSNRGICNYNSGVCECFSDNGNQYA 346
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: F0YJI0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJI0_AURAN) HSP 1 Score: 283 bits (723), Expect = 4.650e-86 Identity = 141/309 (45.63%), Postives = 187/309 (60.52%), Query Frame = 1
Query: 127 SMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDVWDSDKLHTCVCDTGYHG-FDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSLNTLTAGSVTTLTIVADGSSIY-DSDAIGYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS 1047
S C NSC+R+G C+ FG C C++GW G+DCS R C AW+D A++ DTAH ECSNRG CDR G C+CM GF+G ACE C C HG C S+ A D+S ++ Y+ WD+DK++ CVCD+ Y F+C +R CP+GDDPLT+ QVNE+Q++ C AT+G FVL G PT DI +AL + V+V FS+ AC +IN I +EF NFG L P+ ++ G+VT I DG +I D+ Y SVKGTKE+E+CSNRG+CD C C +N D ++S
Sbjct: 22 SQCPNSCNRKGACDIFGSCSCFSGWTGSDCSLRSCPWSYAWTDYASSDDTAHAKAECSNRGLCDRTTGSCECMEGFTGRACEHMACDFNCHYHGECLSMRRLALTQYSDESERFAYESPWDADKIYGCVCDSPYTATFNCGMRVCPSGDDPLTSNQVNEVQILTCMATSGKFVLLLHGKPTGDIRKGMHIDQFMAALQESEAIDAVSVTFSVDNGTACQEDSINAISIEFTQNFGSLPPLIAVTDNLEGTVT---ISGDGVTILRDTANFEYLSVKGTKEDEQCSNRGLCDPFSATCTCMNTNSDTYSS 327
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Match: A0A7S4E5E8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5E8_9STRA) HSP 1 Score: 280 bits (717), Expect = 3.640e-85 Identity = 137/319 (42.95%), Postives = 196/319 (61.44%), Query Frame = 1
Query: 97 LAVLLPSRVLSMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQGYRGDDSIQYPYDDVWDSDKLHTCVCDTGYHG-FDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGHPTTDILYDASEADIESALAAIPDVQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSLNTLTAGSVTTLTIVADGSSIY-DSDAIGYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFAS 1047
L + + + V + C N+C+ +G C+PFGRC C++GW GADC R C T AW+D A++ + AH ECSNRG CD G C+C GF+G AC+ C R C G C S+ ++A +DS Q+ Y+ WD+DK++ CVCD+ Y F+CA R CP+GDDP+T Q NE+Q C AT G+FVL GH + DI E +++AL + V+V +SI AC++ ++NV+++EF +FG L P+ L+ AG T+ + ADG +++ DS + S KGTKE+EECSNRGIC+ + C C +N D F S
Sbjct: 10 LVIFIAAAVDAQCPNNCNLKGKCDPFGRCTCFSGWTGADCGYRKCPTHYAWADVASSDEVAHARAECSNRGLCDEGTGECECAEGFTGKACQHLACDRECGFKGKCVSMRNFASSQYNEDSQQFVYETPWDADKMYGCVCDSPYDAVFNCAFRRCPSGDDPMTPDQKNEVQYFKCMATGGTFVLLMAGHASGDIRTGMKEHQLKAALEQSAAITEVDVTYSIDNGTACTTDSVNVVRIEFTQDFGSLPPLVPLDDDLAG---TIQVSADGQTVFTDSLGADFVSKKGTKEDEECSNRGICNPFDATCLCLDTNGDTFKS 325 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16184.4503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16184.4503.1 >prot_Ecto-sp13_S_contig16184.4503.1 ID=prot_Ecto-sp13_S_contig16184.4503.1|Name=mRNA_Ecto-sp13_S_contig16184.4503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp ERVRASGLSSVMATTSLYRVPMWRTHLRAPLFLAVLLPSRVLSMCSNSCSback to top mRNA from alignment at Ecto-sp13_S_contig16184:1442..3972+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16184.4503.1 ID=mRNA_Ecto-sp13_S_contig16184.4503.1|Name=mRNA_Ecto-sp13_S_contig16184.4503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16184:1442..3972+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16184:1442..3972+ >mRNA_Ecto-sp13_S_contig16184.4503.1 ID=mRNA_Ecto-sp13_S_contig16184.4503.1|Name=mRNA_Ecto-sp13_S_contig16184.4503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16184:1442..3972+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |