prot_Ecto-sp13_S_contig16175.4498.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig16175.4498.1
Unique Name	prot_Ecto-sp13_S_contig16175.4498.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	132

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A6H5L5D5_9PHAE (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5D5_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 4.170e-83
Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 131
            A  RGIFLFNKLSQISEWKKDHRWK+DQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDL SLK+ +    G
Sbjct:   22 AQGRGIFLFNKLSQISEWKKDHRWKADQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLQSLKMFLTLKHG 151

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: D8LLT6_ECTSI (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT6_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 4.230e-81
Identity = 118/130 (90.77%), Postives = 122/130 (93.85%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 131
            A  RGIFLFNKLSQISEWKKDHRWK+DQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKK+EDYDKEVGCKWDL SLK+ +    G
Sbjct:  142 AQGRGIFLFNKLSQISEWKKDHRWKADQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKAEDYDKEVGCKWDLQSLKMFLTLKHG 271

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A835ZCT8_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT8_9STRA)

HSP 1 Score: 201 bits (511), Expect = 2.570e-61
Identity = 91/130 (70.00%), Postives = 106/130 (81.54%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 131
            A  RGIFLFNKLSQIS+WKKDH W+ DQPQAE+YIAQRY+ NP  +GGKKFDLRLYVLVTSF+PL VWLY  GFARFSG RY  +R ++ N YVHLTNVAIQKK+E YD+ VGCK  LH+LK+++    G
Sbjct:  115 AQGRGIFLFNKLSQISDWKKDHNWRPDQPQAESYIAQRYIMNPCTVGGKKFDLRLYVLVTSFSPLAVWLYGAGFARFSGQRYTQERGSMGNVYVHLTNVAIQKKAEGYDRGVGCKLALHALKLLLTARHG 244

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3D9R4_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D9R4_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 1.950e-58
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 131
            A  +GIFLFNKLSQISEW+KDH+WK+D PQAE YI QRY+ENPYLIGGKKFDLR+YV+VTS+NPLTV+LY  GF RFS  R+   +  + N ++HLTNVAIQK + +Y    GCKW L SLK+ +    G
Sbjct:   32 AQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHG 161

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3G4H8_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H8_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 5.290e-57
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 131
            A  +GIFLFNKLSQISEW+KDH+WK+D PQAE YI QRY+ENPYLIGGKKFDLR+YV+VTS+NPLTV+LY  GF RFS  R+   +  + N ++HLTNVAIQK + +Y    GCKW L SLK+ +    G
Sbjct:  140 AQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHG 269

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3DBK5_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DBK5_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 1.070e-56
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 131
            A  +GIFLFNKLSQISEW+KDH+WK+D PQAE YI QRY+ENPYLIGGKKFDLR+YV+VTS+NPLTV+LY  GF RFS  R+   +  + N ++HLTNVAIQK + +Y    GCKW L SLK+ +    G
Sbjct:   32 AQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHG 161

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A0M0JEH9_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEH9_9EUKA)

HSP 1 Score: 189 bits (480), Expect = 1.350e-56
Identity = 83/131 (63.36%), Postives = 104/131 (79.39%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFGL 132
            A  RGIFLFNKLSQI++WKKDH+WKSD+PQAE Y+ QRY+ENP L+GGKKFD+R+YVLVT+++PLTV+LY  GFARFS  R+ T    L++ YVHLTN AIQK    YDK+ GCKW L  LK+ + G +G+
Sbjct:  143 AQGRGIFLFNKLSQINDWKKDHKWKSDEPQAEIYVVQRYIENPLLVGGKKFDMRIYVLVTAYSPLTVYLYRSGFARFSLYRFETTAKNLSDTYVHLTNAAIQKTGPAYDKQAGCKWSLRHLKLYLMGKYGM 273

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3G4H5_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=6 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H5_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 1.720e-55
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 131
            A  +GIFLFNKLSQISEW+KDH+WK+D PQAE YI QRY+ENPYLIGGKKFDLR+YV+VTS+NPLTV+LY  GF RFS  R+   +  + N ++HLTNVAIQK + +Y    GCKW L SLK+ +    G
Sbjct:  140 AQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHG 269

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S0PTM5_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PTM5_9EUKA)

HSP 1 Score: 186 bits (473), Expect = 3.750e-55
Identity = 84/131 (64.12%), Postives = 100/131 (76.34%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFGL 132
            A  +GIFLF+KLSQI+EWKKDH+WK D PQAE Y+ QRY+ENP LIGGKKFDLR+Y LVTSF PL V+LY  GFARFS  RY T++  L + YVHLTNVA+QK    YD   GCKW L +LK+ + G FG+
Sbjct:  143 AQGKGIFLFSKLSQITEWKKDHKWKPDSPQAETYVVQRYLENPMLIGGKKFDLRIYALVTSFMPLVVYLYRSGFARFSSFRYNTNQKNLGDTYVHLTNVAVQKTGPGYDAGAGCKWPLRNLKLYLIGKFGV 273

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3LN32_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LN32_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.840e-53
Identity = 79/130 (60.77%), Postives = 107/130 (82.31%), Query Frame = 0

Query:    2 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 131
            A  +GIFLFNKLSQIS+WKKDH+WKSD PQAE+Y+AQRYV+ PY +GGKKFD+RLYVLVTSF+PLTVW++  GFARF+ TRY +D++ + + Y+HLTN +IQKK++D+++E+  KW +  LK+ +    G
Sbjct:   69 AQGKGIFLFNKLSQISDWKKDHKWKSDAPQAESYVAQRYVDRPYTVGGKKFDMRLYVLVTSFSPLTVWMHRNGFARFTNTRYNSDKSNINDSYMHLTNHSIQKKAKDHNQEL--KWGVDGLKLFLMSRHG 196

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L5D5_9PHAE	4.170e-83	91.54	Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ec...	[more]
D8LLT6_ECTSI	4.230e-81	90.77	Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ec...	[more]
A0A835ZCT8_9STRA	2.570e-61	70.00	Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Tr...	[more]
A0A7S3D9R4_9EUKA	1.950e-58	63.08	Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Pa...	[more]
A0A7S3G4H8_9EUKA	5.290e-57	63.08	Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Pa...	[more]
A0A7S3DBK5_9EUKA	1.070e-56	63.08	Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Pa...	[more]
A0A0M0JEH9_9EUKA	1.350e-56	63.36	Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ch...	[more]
A0A7S3G4H5_9EUKA	1.720e-55	63.08	Tubulin--tyrosine ligase-like protein 9 n=6 Tax=Pa...	[more]
A0A7S0PTM5_9EUKA	3.750e-55	64.12	Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Co...	[more]
A0A7S3LN32_9STRA	1.840e-53	60.77	Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ap...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.470.20		coord: 43..123 e-value: 9.0E-33 score: 115.8
None	No IPR available	PANTHER	PTHR12241	TUBULIN TYROSINE LIGASE-RELATED	coord: 4..128
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PFAM	PF03133	TTL	coord: 5..124 e-value: 5.4E-40 score: 137.3
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PROSITE	PS51221	TTL	coord: 1..132 score: 21.883
IPR013815	ATP-grasp fold, subdomain 1	GENE3D	3.30.1490.20		coord: 5..42 e-value: 9.0E-33 score: 115.8
IPR027751	Probable tubulin polyglutamylase TTLL9	PANTHER	PTHR12241:SF39	TUBULIN POLYGLUTAMYLASE TTLL9-RELATED	coord: 4..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig16175	contig	Ecto-sp13_S_contig16175:708..2118 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig16175.4498.1	mRNA_Ecto-sp13_S_contig16175.4498.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig16175 708..2118 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig16175.4498.1 ID=prot_Ecto-sp13_S_contig16175.4498.1|Name=mRNA_Ecto-sp13_S_contig16175.4498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp
AAPNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGK
KFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNV
AIQKKSEDYDKEVGCKWDLHSLKVMIAGSFGL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004344	TTL/TTLL_fam
IPR013815	ATP_grasp_subdomain_1
IPR027751	TTLL9