prot_Ecto-sp13_S_contig1617.4496.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1617.4496.1
Unique Nameprot_Ecto-sp13_S_contig1617.4496.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length350
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1617.4496.1 vs. uniprot
Match: A0A6H5JMZ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMZ4_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 7.910e-189
Identity = 323/349 (92.55%), Postives = 334/349 (95.70%), Query Frame = 0 
Query:    1 MRLLVLLAAVAAGIVLQPSGVAAADEGVQQQAFRCESEEDLDGSACRVDMLPDSALAEMVYERGFDPDGADRLQLLDAVMQLLDYEYATGEDLREMEYIPDDGSAAAAAETAXXDLXXXXXXXXXXXXXXXXXXXXXXXXXGTGGEAGLEEEYASAGREDGDVDSPAGVESGGVGNDEEEASDDAIAREVIEECSSSSVASSFPVGGRGKEVAAYDESTLLGYAHGLATEVLRTIRRDLNSLVGMLPEPVERPVREAAAFVANTATRFVGPAVQKAERYTRGLRRGAGKTAGKAVVALKDEVVPRVWTGVRRAASNAKRRLEDAIAARKERSEQRREQHEQEEGRVQRD 349
            M LLVLLAAVAAGIVLQPSGVAAADEGVQQ+AFRCESEEDLDGSACRVDMLPDSALAEMVYERGFDPDGADRLQLLDAVMQLLDYEYATGEDLREMEYIPDDGSAAAAAETA  DL XXXXXXXXXXXXXXXXXXXXXXXXGT GE GLEEE+ +AGREDGD DSPAGVESGGVGNDEEEASDDAIAREVIEEC+SSSV SS PVGGRG+EVAAY ESTLLGYAHGLATEVLRT+RRDLNSLVGMLPEP+ERPVREAAAFV NTATRFVGPAVQKAERYTRGLRRGAGKTAGKAV+ALKDEV+PRVWTGV RAASNAKRR+EDAIAARKERSEQRREQ EQE+GR QRD
Sbjct:   13 MNLLVLLAAVAAGIVLQPSGVAAADEGVQQEAFRCESEEDLDGSACRVDMLPDSALAEMVYERGFDPDGADRLQLLDAVMQLLDYEYATGEDLREMEYIPDDGSAAAAAETAAADLEXXXXXXXXXXXXXXXXXXXXXXXXGTRGEEGLEEEHGAAGREDGDADSPAGVESGGVGNDEEEASDDAIAREVIEECTSSSVTSSCPVGGRGEEVAAYGESTLLGYAHGLATEVLRTMRRDLNSLVGMLPEPLERPVREAAAFVGNTATRFVGPAVQKAERYTRGLRRGAGKTAGKAVMALKDEVLPRVWTGVSRAASNAKRRVEDAIAARKERSEQRREQQEQEDGRAQRD 361
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1617.4496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JMZ4_9PHAE7.910e-18992.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..133
NoneNo IPR availableCOILSCoilCoilcoord: 322..349
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..349
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.781

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1617contigEcto-sp13_S_contig1617:9744..11597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1617.4496.1mRNA_Ecto-sp13_S_contig1617.4496.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1617 9733..11597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1617.4496.1 ID=prot_Ecto-sp13_S_contig1617.4496.1|Name=mRNA_Ecto-sp13_S_contig1617.4496.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=350bp
MRLLVLLAAVAAGIVLQPSGVAAADEGVQQQAFRCESEEDLDGSACRVDM
LPDSALAEMVYERGFDPDGADRLQLLDAVMQLLDYEYATGEDLREMEYIP
DDGSAAAAAETAAADLEAAAANAAAAALAAEAEAAALAAAAGTGGEAGLE
EEYASAGREDGDVDSPAGVESGGVGNDEEEASDDAIAREVIEECSSSSVA
SSFPVGGRGKEVAAYDESTLLGYAHGLATEVLRTIRRDLNSLVGMLPEPV
ERPVREAAAFVANTATRFVGPAVQKAERYTRGLRRGAGKTAGKAVVALKD
EVVPRVWTGVRRAASNAKRRLEDAIAARKERSEQRREQHEQEEGRVQRD*
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