mRNA_Ecto-sp13_S_contig1617.4495.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: A0A6H5JIN0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN0_9PHAE) HSP 1 Score: 1056 bits (2731), Expect = 0.000e+0 Identity = 629/695 (90.50%), Postives = 640/695 (92.09%), Query Frame = 1
Query: 1 KGSEIELLQAENALLRLALEEAQEKLRAATNISGRSVRPVRSRSHSRQSSSLSXXXXSREPGNGGVAYAQMRRLLLKDDRFLRDTFLPFLNIEDFGRLSGVCRRLKRSTYDLDVIVRCVESGGVTDANRGLMWLIMVGMDTVEPSSRGVLGVVIRERAESPEEQYDRLHRAMNGTVSIASPVKLPGAPAGRDGDHGGGEAQTAPAGPGADSGKEGDSQQXXXXQLKPVGVGGRQGMFLSSDDESDANNRTSRSRGNSGSSAGCVAGDGGRLSDEGDXXXXXXXSSVTDAGGCASVGGESVLLWEDSGHGKGGAPSTTSPRLQLEAVTASRPPAADEQTTAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDAEAAAGIRPLGGWQGAAQQEIGMVDDEATEAVEAAAKAALMAAGLADAEXXXXXXXXXXXXXXXXXTSGVVGWASGLFRRTSGTGSPRTGGDSSPGATRESSLGSQESGPNFTNGPSEARTSALSRMSSKSRLFGGLRYSRASTPVSTLPADNPSPSAEPSESFFGKNSGKEEEDTPPGDDAAGAVVKSEGDQNGKANEGEALIERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLRY 2085
KGSEIELLQAENALLRLALEEAQEKLRAATNISGRSVRPVRSRSHSRQS S S SREPGNGGVAYAQMRRLLLKDDRFLR TFLPFLNIEDFGRLSGVCRRLKRSTYDLDVIVRCVESGGVTDA RGLMWLIMVGMDTVEPSSRGVLGVVIRERAESPEEQYDRLHRAMNGTVSIASPVKL G PAG DGD+GGGEAQTAPAGPGADSGKEG+SQQ Q KP GVGGRQG+ LSSDDESDANNRTSRSRGNSGS+A VAGDG R+SDEG XXXXXXX SVTDAGGCASVGGESVLLWEDSGHGKGGAPSTTSPRLQLEAVTA RPPAADEQTT VS XXXXXXXXXXXXXXXXXXXXXXXXXAFDAEAAAGIRPLGG QGA+QQ++GMVD+EA EAV GLADAEXXXXXXXXXXXXXX TSGVVGWASGLFRRTSGTGSPRTGGDSSPGATR SLGSQESGP TNG EARTSA+SRMSSKS LFGGLRYSRASTPVSTLP DNPSPSAEPSESFFGKNSGKEEEDTPPGDDAAGAVV SEG QNGKANEGEALIERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLR+
Sbjct: 74 KGSEIELLQAENALLRLALEEAQEKLRAATNISGRSVRPVRSRSHSRQSRSFSSSNSSREPGNGGVAYAQMRRLLLKDDRFLRHTFLPFLNIEDFGRLSGVCRRLKRSTYDLDVIVRCVESGGVTDAARGLMWLIMVGMDTVEPSSRGVLGVVIRERAESPEEQYDRLHRAMNGTVSIASPVKLTGTPAGWDGDNGGGEAQTAPAGPGADSGKEGNSQQQQ--QRKPFGVGGRQGLCLSSDDESDANNRTSRSRGNSGSTAENVAGDGRRISDEG-XXXXXXXXSVTDAGGCASVGGESVLLWEDSGHGKGGAPSTTSPRLQLEAVTAGRPPAADEQTTVVSTAASXXXXXXXXXXXXXXXXXXXXXXXXXAFDAEAAAGIRPLGGLQGASQQQVGMVDEEAAEAVXXXXXXXXXXGGLADAEXXXXXXXXXXXXXXATATSGVVGWASGLFRRTSGTGSPRTGGDSSPGATRALSLGSQESGPKLTNGAPEARTSAMSRMSSKSLLFGGLRYSRASTPVSTLPTDNPSPSAEPSESFFGKNSGKEEEDTPPGDDAAGAVVNSEGHQNGKANEGEALIERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLRF 765
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: D8LJB4_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB4_ECTSI) HSP 1 Score: 842 bits (2174), Expect = 2.690e-299 Identity = 489/630 (77.62%), Postives = 495/630 (78.57%), Query Frame = 1
Query: 211 MRRLLLKDDRFLRDTFLPFLNIEDFGRLSGVCRRLKRSTYDLDVIVRCVESGGVTDANRGLMWLIMVGMDTVEPSSRGVLGVVIRERAESPEEQYDRLHRAMNGTVSIASPVKLPGAPAGRDGDHGGGEAQTAPAGPGADSGKEGDSQQXXXXQLKPVGVGGRQGMFLSSDDESDANNRTSRSRGNSGSSAGCVAGDGGRLSDEGDXXXXXXXSS----VTDAGGCASVGGESVLLWEDSGHGKGGAPSTTSPRLQLEAVTASRPPAADEQTTAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDAEAAAGIRPLGGWQGAAQQEIGMVDDEATEAVEAAAKAALMAAGLADAEXXXXXXXXXXXXXXXXXTSGVVGWASGLFRRTSGTGSPRTGGDSSPGATRESSLGSQESGPNFTNGPSEARTSALSRMSSKSRLFGGLRYSRASTPVSTLPADNPSPSAEPSESFFGKNSGKEEEDTPPGDDAAGAVVKSEGDQ-NGKANEGEALIERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLRY 2085
MRRLLLKDDRFLRDTFLPFLNIEDFG LSGVCRRLKRSTYDLDVIVRCVESGGVTDA RGLMWLIMVGMDTVEPSSRGVLGVVIRERAESPEEQYDRLHRAMNGTVSIASPVKL G PAGRDGD+GGGEAQTAPAGPGADSGKEGD XXXX G RQG+ LSSDDESDANN TSRSRGNS SSAGCVAGDGGRLSDEG XXXXXXX VTDAGGCASVGGESVLLWEDSGHGKGGAPSTTSPRLQLE V ASRPP AD XXXX TSGVVGWASGLFRRTSGTGSPRTGGDSSPGATR SSLGSQESGPN TNG SEA+TSA+SRMSSKSRLFGGLRYSRASTPVSTLPADNPSPSAEPSESFFGKNSGKEEEDTPPGDDAAGAVV SEGDQ NGK NEGEALIERVPGLYSALLMSADAMDAND+TGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLR+
Sbjct: 1 MRRLLLKDDRFLRDTFLPFLNIEDFGTLSGVCRRLKRSTYDLDVIVRCVESGGVTDATRGLMWLIMVGMDTVEPSSRGVLGVVIRERAESPEEQYDRLHRAMNGTVSIASPVKLTGTPAGRDGDNGGGEAQTAPAGPGADSGKEGDXXXXXXXXXXXXXXG-RQGLLLSSDDESDANNMTSRSRGNSDSSAGCVAGDGGRLSDEGXXXXXXXXXXXXXXVTDAGGCASVGGESVLLWEDSGHGKGGAPSTTSPRLQLEPVIASRPPTADXXXXXXXXXXX----------------------------------------------------------------------------------------------TSGVVGWASGLFRRTSGTGSPRTGGDSSPGATRASSLGSQESGPNLTNGASEAQTSAMSRMSSKSRLFGGLRYSRASTPVSTLPADNPSPSAEPSESFFGKNSGKEEEDTPPGDDAAGAVVNSEGDQKNGKENEGEALIERVPGLYSALLMSADAMDANDMTGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLRF 535
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: A0A078A7X3_STYLE (Tbc domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A7X3_STYLE) HSP 1 Score: 71.2 bits (173), Expect = 6.040e-9 Identity = 35/89 (39.33%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 1837 DIEKDLQRTL--------GMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRL 2079
+IEKD++RT G + + VLR + +P VGYVQG NF+ S++++ ++EE+ FW+F+ +L L +LY GMPLL+L
Sbjct: 852 EIEKDIERTFPNEKYFYKGSQNYYKMLRVLRAVAYHMPQVGYVQGFNFIAGSLMKLLKNEEQVFWMFINILTWRGLYQLYTDGMPLLKL 940
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: A0A7S2PZU8_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PZU8_9DINO) HSP 1 Score: 67.4 bits (163), Expect = 8.500e-9 Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query: 1810 RGPKQSCFVDIEKDLQRT------------LGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLL 2073
R + C +I KD+ RT LG L NVLR S F P+VGY QGM F+C VL ++ EE+AF + + +L +R+ +L+ PG+PLL
Sbjct: 13 RTEEAPCEAEIVKDINRTFPKHVLYRDKTGLGQQQ---LLNVLRAYSVFNPEVGYCQGMGFIC-GVLLMYMCEEDAFLMLISLLDNYRMSKLFMPGLPLL 108
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: A0A0N1I3T4_LEPSE (Putative rab-like GTPase activating protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1I3T4_LEPSE) HSP 1 Score: 66.6 bits (161), Expect = 7.220e-8 Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 1
Query: 1735 ERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGM----------TDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQ--RFRLRELYCPGMP 2067
ER G Y+ L + M + D+ GV IE+DL RT T LRNVLR + + P VGY QGM F+ +++ +DEE+AFW VG+++ ++R+ ++ PG P
Sbjct: 180 ERHTGHYARL--RSQEMASKDLAGV----------IERDLGRTFPTHRLFADGADGTGQRMLRNVLRAYANYSPAVGYCQGMGFLAATLILQIEDEEDAFWALVGLMEGKQYRMGAVFSPGFP 290
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: M5GG67_DACPD (TBC-domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GG67_DACPD) HSP 1 Score: 67.4 bits (163), Expect = 8.560e-8 Identity = 41/115 (35.65%), Postives = 58/115 (50.43%), Query Frame = 1
Query: 1744 PGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMT--------DVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGM 2064
PGL+ LL S DA + +IEKD++RT+ + V LR VL+ S P VGY QGMN + S+L V+ DEEEAFWV +++R + + P +
Sbjct: 1009 PGLFHELLSSHDAQTNISLE-----------EIEKDVRRTMPLNVFFGGDGVGVGKLRRVLQAYSWRNPAVGYCQGMNLITSSLLLVYADEEEAFWVLASIIERLLPADFFSPSL 1112
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: A0A4Y9Z4U0_9AGAM (Rab-GAP TBC domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9Z4U0_9AGAM) HSP 1 Score: 67.0 bits (162), Expect = 1.180e-7 Identity = 46/130 (35.38%), Postives = 64/130 (49.23%), Query Frame = 1
Query: 1738 RVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMT--------DVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGM------PLLRLRY 2085
R PGL++ LL A+A G G +IEKD+ RT+ + V LR VL S P VGY QGMN V ++L V+ DEE+AFWV +++R + + P + PL+ L Y
Sbjct: 1291 REPGLFTDLLAEAEAEAKAHREG--GGDGGVVREIEKDVGRTMPLNVFFGGDGAGVEKLRRVLVAYSRRNPAVGYCQGMNLVASTLLLVYADEEDAFWVLAAIIERILPEDFFSPSLLPSRACPLVLLEY 1418
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: K5X4W7_PHACS (Rab-GAP TBC domain-containing protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5X4W7_PHACS) HSP 1 Score: 66.6 bits (161), Expect = 1.460e-7 Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 1
Query: 1726 ALIERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMT--------DVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGM------PLLRLRY 2085
AL R PGL+ LL + D S +IEKD+ RT+ + V LR VLR S PD+GY QGMN V ++L V+ DEEEAFWV ++++ + + + PL+ L Y
Sbjct: 936 ALDMREPGLFHDLLANVDETS------------SVVKEIEKDVGRTMPLNVFFGRTGAGVDKLRRVLRAYSQRNPDIGYCQGMNLVTSTLLLVYADEEEAFWVLCAIIEKLLPEDFFSHSLLSSRACPLVLLEY 1057
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: A0A1X6MS87_9APHY (Rab-GAP TBC domain-containing protein n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6MS87_9APHY) HSP 1 Score: 66.6 bits (161), Expect = 1.470e-7 Identity = 46/117 (39.32%), Postives = 60/117 (51.28%), Query Frame = 1
Query: 1738 RVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMT--------DVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGM 2064
R PG++S LL +D D N VR +IEKD+ RT+ + V LR VL S P VGY QGMN V ++L VF DEEEAFWV M++R + + P +
Sbjct: 985 REPGVFSDLLAQSD--DENG--AVR--------EIEKDVGRTMPLNVFFGRTGAGVDKLRRVLIAYSRRNPTVGYCQGMNLVTSTLLLVFGDEEEAFWVLAAMIERILPPDFFSPSL 1089
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Match: A0A0N0DWF8_9TRYP (Putative rab-like GTPase activating protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0N0DWF8_9TRYP) HSP 1 Score: 65.5 bits (158), Expect = 1.660e-7 Identity = 39/123 (31.71%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 1735 ERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDV----------SPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQ--RFRLRELYCPGMP 2067
+R GLY+ L + M + ++ GV IE+DL RT + LRN+LR + P VGY QGM F+ +++ ++EE+AFW FVG+++ ++R+ ++ PG P
Sbjct: 180 QRYLGLYARL--RSQEMASKELAGV----------IERDLDRTFPTHRLFADGVNGRGQQMLRNILRAYANHNPKVGYCQGMGFLAATLILQIEEEEDAFWAFVGLMEGKKYRMAAVFSPGFP 290 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1617.4495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1617.4495.1 >prot_Ecto-sp13_S_contig1617.4495.1 ID=prot_Ecto-sp13_S_contig1617.4495.1|Name=mRNA_Ecto-sp13_S_contig1617.4495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=695bp KGSEIELLQAENALLRLALEEAQEKLRAATNISGRSVRPVRSRSHSRQSSback to top mRNA from alignment at Ecto-sp13_S_contig1617:326..9251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1617.4495.1 ID=mRNA_Ecto-sp13_S_contig1617.4495.1|Name=mRNA_Ecto-sp13_S_contig1617.4495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8926bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1617:326..9251- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1617:326..9251- >mRNA_Ecto-sp13_S_contig1617.4495.1 ID=mRNA_Ecto-sp13_S_contig1617.4495.1|Name=mRNA_Ecto-sp13_S_contig1617.4495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2085bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1617:326..9251- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |