prot_Ecto-sp13_S_contig16166.4494.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16166.4494.1
Unique Nameprot_Ecto-sp13_S_contig16166.4494.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: A0A6H5L0T1_9PHAE (PAP-associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T1_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 1.530e-129
Identity = 188/202 (93.07%), Postives = 189/202 (93.56%), Query Frame = 0
Query:    1 MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPASPPQVAAAVPGAPSAARMFYGQRGRTSSFQGGLGGVAPPGVPTVTAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALDDESQLRASPYRLLRCIISDPEPAPDS 202
            MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPA P QVAAAVPGAPSAARMFYGQ        GGLGGVAPPG P V AGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHA+LARALDDESQLRASPYRLLRCIISDPEPAPDS
Sbjct:   41 MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPAPPTQVAAAVPGAPSAARMFYGQ--------GGLGGVAPPGAPPVAAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHASLARALDDESQLRASPYRLLRCIISDPEPAPDS 234          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: A0A835ZHQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.060e-51
Identity = 103/183 (56.28%), Postives = 121/183 (66.12%), Query Frame = 0
Query:    3 EKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPASPPQVAAAVPGAPS-AARMFYGQRGRTSSFQGG-LGGVAPPGVPTVTAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALDDESQLRA 183
            E+GL  SYTGGLSSYAL L+VARYLQEQ++ +D+GSLL GFLDF+GN FDPR TGISV R  YFSR A  P + P +AA V  +P    ++FY       S  G  +G  A  G  T        G    +PYRFDPLFIEDP+ L NNVG NCFR+YQI+RAWSDAHAAL RA+D      A
Sbjct:  172 ERGLCESYTGGLSSYALVLLVARYLQEQSTHLDAGSLLRGFLDFFGNTFDPRTTGISVTRRCYFSRLAQTPTTWPPLAAPVQPSPGMGGQVFYPPPPPLPSHPGPHMGAGAAAGGFT--------GGREGVPYRFDPLFIEDPLALGNNVGRNCFRIYQIKRAWSDAHAALTRAMDSTDHFAA 346          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 5.380e-51
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
Query:    1 MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPASPPQVAAAVPGAPSAARMFYGQ 96
            MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPA PPQVAAAVPGAPSAARMFYGQ
Sbjct: 1828 MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPAPPPQVAAAVPGAPSAARMFYGQ 1923          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: W7U5Q9_9STRA (Nucleotidyl transferase domain protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5Q9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 9.970e-38
Identity = 95/197 (48.22%), Postives = 113/197 (57.36%), Query Frame = 0
Query:    1 MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPASPPQVAAAVPGAPSAARMFYGQRGRTSSFQGGLGGVAPPG--VPTVTAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALDDESQLRASPYRLLRCIISD 195
            M E+GL  SY+GGLSSY L LMVARYLQEQ++ MD+G+LLLGFLDFY NHFDPR  GIS  +  YFSRS+        +               G   R S   GG G V  P   V       P  G  +  PY+FDPL+IEDP+  SNN+G NCFR++QIQRAW+DA     R LD  S       RL R + SD
Sbjct: 1186 MKERGLMESYSGGLSSYGLVLMVARYLQEQSNAMDTGALLLGFLDFYSNHFDPRSMGISTNQRCYFSRSS----QQSHLXXXXXXXXXQNMPPLGSNRRVSL--GGAGDVHLPYYYVHQQQQVRPAGGSFLENPYKFDPLYIEDPIRPSNNIGRNCFRIFQIQRAWNDAW----RDLDPGSS--GGVPRLNRIVQSD 1370          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: A0A1Z5KCZ8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCZ8_FISSO)

HSP 1 Score: 142 bits (359), Expect = 1.040e-35
Identity = 93/222 (41.89%), Postives = 119/222 (53.60%), Query Frame = 0
Query:    3 EKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSR-SAPLPASPPQVAAA-----------VPGAPSAARMFYGQRGRTSSFQGGLGGV---APPGVPTVTAGI---------PGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALDDESQLRA-----SPYRLLRCIISD 195
             +GL  +YTGGLS+Y L LMVARYLQEQ S  D GSLL+GFLDFYGN+FDPR  GISV   +YFSR SA + A+P  V              VP      R  +  +G   + +G    V   +   +P  T                D   MPY  DPL IEDP+N SNNVG N FR++ + RA+SDAH AL  +L+ +          S Y LL+C++ +
Sbjct: 1274 NRGLLTAYTGGLSAYGLFLMVARYLQEQESWGDCGSLLMGFLDFYGNNFDPRSIGISVKNRQYFSRLSAAMGAAPQSVPTNETAWRPIGPNHVPTTQFFRRYSFSDKGNIDAHRGANPSVIVQSATSIPVATNNNYFRKPLTQHNNEIDHSAMPYTLDPLLIEDPLNESNNVGRNAFRIFSVLRAFSDAHRALLASLEWDLHSNVEFQDDSEYPLLKCLLQN 1495          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: A0A1Z5KF72_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KF72_FISSO)

HSP 1 Score: 140 bits (352), Expect = 8.990e-35
Identity = 93/228 (40.79%), Postives = 117/228 (51.32%), Query Frame = 0
Query:    3 EKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSA----PLPASPPQVAAA--------VPGAPSAARMFYGQRGRTSSFQGGLGGVA------------------PPGVPTVTAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALDDESQLRA-----SPYRLLRCIISD 195
             +GL  +YTGGLS+Y L LMVARYLQEQ S  D GSLL+GFLDFYGN+FDPR TGISV   +YFSR +    P P S P    A        +P      R  +  +G   + +G    V                   PP  P          D   MPY  DPL IEDP+N SNNVG N FR++ + RA+SDAH AL  +L+ +          S Y LL+ ++ +
Sbjct: 1273 NRGLLTAYTGGLSAYGLFLMVARYLQEQESWGDCGSLLMGFLDFYGNNFDPRSTGISVKNRQYFSRLSAVMGPAPQSVPTNETAWRPIGANHLPTTQFFRRYSFSDKGNIDAHRGANPSVIVQSATPIPVTAKNNHHRKPPTQPNNEI------DHSAMPYTLDPLLIEDPLNESNNVGRNAFRIFSVLRAFSDAHRALLASLEWDLHSNVEFQDDSEYPLLKFLLQN 1494          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: A0A7S2Q1J0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1J0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.060e-33
Identity = 88/201 (43.78%), Postives = 114/201 (56.72%), Query Frame = 0
Query:    1 MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQM-DSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPASPPQVAAAVPGAPSAARMFYGQRGRTSSFQGGLGGVAPPGVPTVTAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALDDESQLRAS-----PYRLLRCIISD 195
            ++++GL  +YTGGLSSY L LMVARY QEQ+    D GSLL+G LDFYGN F+PR TGISV   RYFSR      +  Q A     A    R  +    R SSFQ              TA  P        P +FDP+++EDP+N  NNVG N FR++Q+QRA+SDAH AL  AL+ +    +       Y LL+C++ +
Sbjct: 1312 LLDRGLLTAYTGGLSSYCLFLMVARYCQEQSPTWNDRGSLLMGLLDFYGNFFEPRTTGISVRTRRYFSR---FGENQHQEARRNNAATKPPR--FQPLNRQSSFQ--------------TAQQPN----QLQPGKFDPIWVEDPLNPGNNVGRNAFRIFQVQRAFSDAHRALVAALEWDINSMSEFGEDGEYPLLKCLLQN 1489          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: A0A7S2U5F7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5F7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.410e-33
Identity = 98/254 (38.58%), Postives = 125/254 (49.21%), Query Frame = 0
Query:    1 MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQM--DSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSR---------------SAPLPASPPQVAAAVPGAPSAARMFYGQRGRTSSF--QGGLGGVAPPGVPT--VTAGIPGWG-------------------DMMRMPYR--------------FDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALD----DESQLR-ASPYRLLRCIISD 195
            ++++GL  +YTGGLSSY L LMV RYLQEQ S    D GSLL+GFLDFYGN FDPR TGISV    YF R                 PL    PQV+   P     +  F     R  SF  +G +       VP   +  G P                      D++ MP+R              FDPLFIEDP++  NNVG N FR++Q+QRA++DAH AL  +L+     E  L   S Y LL+C++ +
Sbjct:  923 LLDRGLLTAYTGGLSSYCLFLMVTRYLQEQQSSSWTDCGSLLMGFLDFYGNSFDPRATGISVAGRAYFPRPNHEYQGVASVQNGHKQPLWNVHPQVSMPEPLVSGPSMSFTKNILRRHSFSEKGNMDSNPSSNVPNSAIMGGSPKHSTRPPRFESSQSLGPQNLHQDILHMPHRHVGVPIMSSARPYTFDPLFIEDPLSAGNNVGRNAFRIFQVQRAFADAHRALVASLEWDMGSEGDLNDGSKYPLLKCLLQN 1176          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: A0A7S2PBI3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PBI3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.020e-32
Identity = 88/233 (37.77%), Postives = 117/233 (50.21%), Query Frame = 0
Query:    1 MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQM--DSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPASPPQVAAA----------VPGAPSAARMFYGQRGRTSSFQGGLGGVAPP------------------GVPTVTAG----IPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALD----DESQLRASPYRLLRCIISD 195
            + ++GL  +YTGGLSSY L LMV RYLQEQ +    D GSLL+GFLDFYGN FDPR  GISV + +YFSR     A   Q   +          VP   +  R       R  +    L G A                      P+ T G    +         PY FDPLF+EDP++ SNN+G N FR++Q++RA++DAH AL   L+    D  +     Y LL+C++ +
Sbjct:   67 LQDRGLLTAYTGGLSSYCLFLMVTRYLQEQPNLAWSDCGSLLMGFLDFYGNCFDPRSVGISVKKRKYFSRHVDHVALAKQSNNSWAQQQSNQWLVPHDNALERRHSFNEKRDYALNDSLIGSANSLSSFSKQCQKLHHQQSSGASPSRTHGRKNKLQQQEQPAAKPYTFDPLFVEDPLSESNNIGRNAFRIFQVKRAFADAHRALIATLEWDMHDTPEDEKCQYPLLKCLLQN 299          
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Match: A0A7S3JPY7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPY7_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.460e-31
Identity = 80/179 (44.69%), Postives = 98/179 (54.75%), Query Frame = 0
Query:    3 EKGLSVSYTGGLSSYALTLMVARYLQEQTSQ-MDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPASPPQVAAAVPGAPSAARMFYGQRGRTSSFQGGLGGVAPPGVPTVTAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHAALARALDDESQ 180
             +GL  SYTGGLSSYALTL+VARYL EQ S+  D G+LLLGFLDFY + FDPR TGISVGR  +F+R A L  +P              R     RG                                  + FDPL++EDP++  NNVG NCFR+ QIQRAWS+A  AL  A+  +S+
Sbjct: 1133 NRGLCASYTGGLSSYALTLLVARYLHEQPSRPTDPGALLLGFLDFYAHRFDPRKTGISVGRRCFFAR-AELGTAP--------------RHAVNHRGS---------------------------------FHFDPLYVEDPLSPGNNVGRNCFRIAQIQRAWSEAFFALTEAIRRQSR 1263          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16166.4494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0T1_9PHAE1.530e-12993.07PAP-associated domain-containing protein n=1 Tax=E... [more]
A0A835ZHQ3_9STRA1.060e-5156.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHG7_ECTSI5.380e-5198.96LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
W7U5Q9_9STRA9.970e-3848.22Nucleotidyl transferase domain protein n=4 Tax=Mon... [more]
A0A1Z5KCZ8_FISSO1.040e-3541.89Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5KF72_FISSO8.990e-3540.79Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S2Q1J0_9STRA1.060e-3343.78Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2U5F7_9STRA1.410e-3338.58Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2PBI3_9STRA6.020e-3237.77Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3JPY7_9STRA1.460e-3144.69Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002058PAP/25A-associatedPFAMPF03828PAP_assoccoord: 37..70
e-value: 4.9E-7
score: 29.8
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 3..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 6..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16166contigEcto-sp13_S_contig16166:984..3855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16166.4494.1mRNA_Ecto-sp13_S_contig16166.4494.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16166 605..3861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16166.4494.1 ID=prot_Ecto-sp13_S_contig16166.4494.1|Name=mRNA_Ecto-sp13_S_contig16166.4494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
MMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNH
FDPRLTGISVGRSRYFSRSAPLPASPPQVAAAVPGAPSAARMFYGQRGRT
SSFQGGLGGVAPPGVPTVTAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNV
GHNCFRVYQIQRAWSDAHAALARALDDESQLRASPYRLLRCIISDPEPAP
DS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002058PAP_assoc