prot_Ecto-sp13_S_contig16165.4493.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16165.4493.1
Unique Nameprot_Ecto-sp13_S_contig16165.4493.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length355
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16165.4493.1 vs. uniprot
Match: D7FX00_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX00_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 5.160e-88
Identity = 200/244 (81.97%), Postives = 208/244 (85.25%), Query Frame = 0 
Query:  119 VPRGTAAERGGGSRPLSDADPFGSNSGRHGAPPSQSAQQQGQGGRASRGSKXGLSRRNSFGATSRRGTGRXXXXXXXXXXXXXD-----LEGDSGMMRTASGGSLRGVGGFASRNQRQQQQYRGRDSYDNTYD--DXXXXXXXXXXXXXXXXXXTGYDSDTMSVMDQDALRASMRKRGARGTAGAGGRRGENVEYIVEFERARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPAQVGGFFV 355
            VPRGTAAERG GSRPLS+ADPFGSNSGRHGAPPSQSAQQQGQGGRASRGS X                  XXXXXXXXXXXXX       EGDSGMMRTASGGSLRGVGG+ASRNQRQQQQ RGRD YDNTYD  +XXXXXXXXXXXXXXXXXX GYDSDTMSVMDQDA+RASMRKRGARGTAGAGGRRG+ V+YIVEFERARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPA++ G  V
Sbjct:   54 VPRGTAAERGRGSRPLSEADPFGSNSGRHGAPPSQSAQQQGQGGRASRGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGDSGMMRTASGGSLRGVGGYASRNQRQQQQRRGRDPYDNTYDAEEXXXXXXXXXXXXXXXXXXAGYDSDTMSVMDQDAIRASMRKRGARGTAGAGGRRGDTVDYIVEFERARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPAKIRGVTV 297
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BLAST of mRNA_Ecto-sp13_S_contig16165.4493.1 vs. uniprot
Match: A0A6H5JUS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS7_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 2.630e-56
Identity = 125/147 (85.03%), Postives = 132/147 (89.80%), Query Frame = 0 
Query:  209 MMRTASGGSLRGVGGFASRNQRQQQQYRGRDSYDNTYDDXXXXXXXXXXXXXXXXXXTGYDSDTMSVMDQDALRASMRKRGARGTAGAGGRRGENVEYIVEFERARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPAQVGGFFV 355
            MMRTASGGSLRGVGG ASRNQRQQQ +RGRD  D+TYDD XXXXXXXXXXXXXXXXXTG+DSDTMSVMDQDA+RASMRKRGAR TAGAGGRRG+ VE     +RARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPAQ+ G  V
Sbjct:    1 MMRTASGGSLRGVGGNASRNQRQQQ-HRGRDPCDDTYDDEXXXXXXXXXXXXXXXXXTGFDSDTMSVMDQDAIRASMRKRGARATAGAGGRRGDTVE-----QRARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPAQIRGVTV 141
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16165.4493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX00_ECTSI5.160e-8881.97PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JUS7_9PHAE2.630e-5685.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16165contigEcto-sp13_S_contig16165:549..3777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16165.4493.1mRNA_Ecto-sp13_S_contig16165.4493.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16165 549..3777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16165.4493.1 ID=prot_Ecto-sp13_S_contig16165.4493.1|Name=mRNA_Ecto-sp13_S_contig16165.4493.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=355bp
GPQPVPSGGGGGGGSADEISPFDFDAVAAALPAVSAAAATGRRVSRGSAG
SSSAGDEGRRGGGGSAQQQQQQDAGPGGRGRATTSSSNSSGGRGRAPPST
AGELPARLSRSSRSRSVSVPRGTAAERGGGSRPLSDADPFGSNSGRHGAP
PSQSAQQQGQGGRASRGSKGGLSRRNSFGATSRRGTGRGGGGGAGTGAGG
GDLEGDSGMMRTASGGSLRGVGGFASRNQRQQQQYRGRDSYDNTYDDEDD
DERERGNDEDDEDDDTGYDSDTMSVMDQDALRASMRKRGARGTAGAGGRR
GENVEYIVEFERARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPAQV
GGFFV
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