mRNA_Ecto-sp13_S_contig16163.4492.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7FSN9_ECTSI (Heat shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN9_ECTSI) HSP 1 Score: 523 bits (1346), Expect = 7.580e-182 Identity = 264/274 (96.35%), Postives = 265/274 (96.72%), Query Frame = 1
Query: 16 IYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKEQCK 837
IYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVAL GMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLK DFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTE+VGGHGTFDLVLRPALLRKFFKEQCK
Sbjct: 95 IYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALMGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLK--------DFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEFVGGHGTFDLVLRPALLRKFFKEQCK 360
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: A0A6H5JT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT12_9PHAE) HSP 1 Score: 498 bits (1282), Expect = 2.190e-172 Identity = 251/279 (89.96%), Postives = 263/279 (94.27%), Query Frame = 1
Query: 1 KPSQQIYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKEQCK 837
KPSQQIYDDLVDAVTKSTS++AEMMLMDIFVIALEYIKSVALR MTLTH VSA+DVTWVLTVPVCCSEPAKHFMREAATKAGFIKGG+DDE LVLCMEPIAACLALG+RLQWRM D+YLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDR FEAYLKAS DFVLSVAQEAG R+LESFFASSASYRINQAWERAKIGLRS+DHDCRIDLSELSREPLEVT +EMDEGRRLKN GGTE+VGGHGTF+LVLRPALLRKFF QC+
Sbjct: 70 KPSQQIYDDLVDAVTKSTSKRAEMMLMDIFVIALEYIKSVALRRMTLTHPVSADDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGSDDEDLVLCMEPIAACLALGDRLQWRMGDRYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRQFEAYLKASG-----DFVLSVAQEAGARALESFFASSASYRINQAWERAKIGLRSLDHDCRIDLSELSREPLEVTKDEMDEGRRLKNIGGTEFVGGHGTFELVLRPALLRKFFNNQCE 343
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7FRC9_ECTSI (Heat shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC9_ECTSI) HSP 1 Score: 209 bits (531), Expect = 1.120e-60 Identity = 112/232 (48.28%), Postives = 142/232 (61.21%), Query Frame = 1
Query: 151 VSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEM--DEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKEQCKK 840
V V+WVLTVP CC+ PA FM +AA +AG I G +D E L +C EP+AACLAL +RL W + D YLV+DCGGGTVDI AF++ PP L+Q+G+ WGST VD F +L F SVA AG LESF Y++ Q WE AK+GL +CRID+SE+ E L V+ M D R+ N GG + VGG GT +LVL+PALL +FF+ QC +
Sbjct: 35 VKPNRVSWVLTVPACCTAPATKFMSDAAIRAGLINGEDDAEHLTICKEPVAACLALEDRLDWSVNDMYLVVDCGGGTVDICAFKLAQLGPPILDQVGDNISESWGSTYVDEQFRVFLMT--------FADSVAPRAGHFQLESF-ERDGMYKVLQNWEEAKVGLSVDKPECRIDMSEMV-EALGVSQPAMAMDTARKKTNNGGQDLVGGSGT-ELVLKPALLTRFFRTQCDR 255
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: A0A6H5JDD7_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDD7_9PHAE) HSP 1 Score: 207 bits (528), Expect = 2.210e-57 Identity = 116/266 (43.61%), Postives = 155/266 (58.27%), Query Frame = 1
Query: 34 DAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMT-LTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKE 828
++V K + ++EM L I L + + AL+ + VSA V WVLTVP S+ +R +A AG + +D EGL C EPIAACLA +RL W+ YLV+DCGG TVDI V + L QL + GPWGS +D LF+ +L+ F+ S A AG+R++ SF SSA RI QAWE +K+G + + +CRIDL+EL PLEVT E+MD R KN G E VGG+GT LVL+PA +RK F++
Sbjct: 121 ESVVKCSRNRSEMELAKIMFYLLMHARDAALKNLPGAGKPVSAASVNWVLTVPASLSDRQWETVRNSAVMAGLVNDWHDREGLKFCPEPIAACLAFQDRLDWQAGKTYLVVDCGGVTVDIHVVGVCDTEKRELCQLLKGRSGPWGSETLDILFDEFLRG--------FIASAASGAGKRAITSFLNSSAKLRIMQAWETSKVGWKDKNDECRIDLTELGNYPLEVTMEDMDRARDDKNGHGEELVGGYGTSVLVLKPAWMRKAFQQ 378
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7FTE4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE4_ECTSI) HSP 1 Score: 185 bits (470), Expect = 1.510e-49 Identity = 105/274 (38.32%), Postives = 152/274 (55.47%), Query Frame = 1
Query: 31 VDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHA--VSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQ-----WRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAG-ERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKE 828
+D K + ++ + LM+I V L +++ AL ++ ++ + V WVLTVP E + MR AA + + G+DDE LV C E IAACLA + L W + D YLV+DCGG TVD+ A V L + E + GPWG+ N D+ F+ L+ F A E R++ +F +SSA RI QAWE +K+G + + +C I+++E+ PLEVT E MD R +NR G + VGGHGT LVL+PA ++K F+E
Sbjct: 117 LDTPVKCSRNRSVVELMEILVYLLNHVRDAALLNLSTAGVPPMTVDGVKWVLTVPASLPEQQQEAMRTAAVMSSLVDDGHDDEHLVFCPEAIAACLAFQDNLSQDSLPWNVGDIYLVVDCGGVTVDLHAVGVCDMEKRELSLMHEGTSGPWGAENADKQFDILLQR--------FARCAAPEGTTNRAMANFLSSSAKLRIMQAWETSKVGWKDKNDECWINVTEMKDYPLEVTIEGMDRARNNENRHGEQLVGGHGTCFLVLKPAWMKKAFQE 382
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: A0A6H5K4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X7_9PHAE) HSP 1 Score: 130 bits (326), Expect = 1.510e-32 Identity = 72/163 (44.17%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 34 DAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTL--THAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALG----NRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLK 504
DA S K + L+ + +ALEYIK V + + +H + A D+ WVLTVP S K FMR AA +AG I+ ND E L LC+EP AACL + N +W K +V+DCGGGTVDI+ V+ P LE+L E +GGPWGST D F+ ++K
Sbjct: 115 DAEGISEDEKTRLPLVYVVSLALEYIKDVIINRLNNADSHTLRASDIRWVLTVPAIWSSFGKAFMRSAALRAGLIQDENDMEHLRLCLEPEAACLTVEHHHHNIRKWETGMKVMVLDCGGGTVDITTHHVVRMDPLGLEELEEPTGGPWGSTTADTKFKLFIK 277
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7FNB5_ECTSI (Heat shock protein 70-putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB5_ECTSI) HSP 1 Score: 132 bits (331), Expect = 3.770e-31 Identity = 93/255 (36.47%), Postives = 139/255 (54.51%), Query Frame = 1
Query: 85 IFVI--ALEYIKSVALRGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQ----WRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTE--YVGGHGTFDLVLRPALLRKFFK 825
IFV+ A+EYIK+ L +++ + WV+TVP S K FMR A+ +AG I ND +GL LC+EP AACLA+ + Q W DK +V+DCGGGT+DI++ V SS P L +L E GG WGS+ VD F+A+L+ +F + + G LE + + + WER K L R+ + +++ + LE++ E++E R+ N + +VGG +LVL PAL+ FF+
Sbjct: 132 IFVVSKAIEYIKNQILDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDTRFKAFLQ--------EFFDNAS--GGMTRLEG---THELFAVTVEWERQKTRLAR-GASLRVSIGDIA-DLLELSPREIEELRKFHNDPKPKELHVGGTRR-NLVLPPALVESFFR 370
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7G266_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G266_ECTSI) HSP 1 Score: 129 bits (325), Expect = 2.220e-30 Identity = 95/284 (33.45%), Postives = 138/284 (48.59%), Query Frame = 1
Query: 34 DAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTL--THAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALG----NRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDH----------DCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVG---GHGTFDLVLRPALLRKFFKE 828
DA S +K + L+ + +ALEYIK V + + +H + A D+ WVLTVP S FMR AA +AG I+ ND E L LC+EP AACL + N +W K +V+DCGGGT+DI+ V+S+ P LE+L E +GGPWGST D F+ ++K +L E R S+ + + WE K DH +DL +S + E + ++ +E ++ + G+ G G + L P L+ FFKE
Sbjct: 115 DAEGISEDQKTRLPLIYVVSLALEYIKDVVINRLNKADSHTLKAFDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQRENDMEHLRLCLEPEAACLTVEHHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKE---------LLRCTDEQWAR----LDKSTEMFELMADWEAKKT-----DHYPGKNVWISIAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGSRAPAKAEGMGR-RVSLTPELVSNFFKE 379
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7G6V4_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V4_ECTSI) HSP 1 Score: 125 bits (315), Expect = 4.520e-29 Identity = 99/277 (35.74%), Postives = 141/277 (50.90%), Query Frame = 1
Query: 40 VTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLT--HAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLAL---GNRLQWRMRDK-YLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDC--RIDLSELSREPLEVTTEEMDEGRRLKNRG--GTEYVGGHGTFDLVLRPALLRKFFKEQCKK 840
+T+S + + L+ + +L Y K L ++ T V V WVLTVP + AK FMR+AA +AG I N L LC+EP AACLA N L K +VIDCGGGTVDI+A ++IS P +LE++ GG +GST VD F +LK +LG + + R+L S I +WER K + +D R++LSEL+ +VT ++M+ RR N G + +VGG F++ L L+ FF +K
Sbjct: 107 MTESVGGQHTVPLLGVMTASLRYFKEDVLAFLSRTGGRTVDVNSVNWVLTVPAIYDDFAKRFMRQAAYEAGMIDRMNSTR-LRLCLEPEAACLAAITTDNPLTSNAEGKNMMVIDCGGGTVDITAHKIISVEPLTLEEVAAPDGGLFGSTRVDNAFRVWLKG-FLGEKFQEIETT------RTLLS---------IMMSWERKKATFQGLDSAAVWRLNLSELA--GYDVTNQDMENLRRSYNDGKPSSLFVGGE-KFNVTLPTTLVTSFFTPTLQK 363
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: A0A6H5JSM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM6_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.290e-26 Identity = 96/284 (33.80%), Postives = 139/284 (48.94%), Query Frame = 1
Query: 19 YDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLT--HAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLAL---GNRLQWRMRDK-YLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDC--RIDLSELSREPLEVTTEEMDEGRRLKNRGGTE--YVGGHGTFDLVLRPALLRKFFKEQCKK 840
+ D +T+S + + L+ + +L Y K L ++ T V V WVLTVP + AK FMR+AA +AG I + L LC+EP AACLA N L DK +VIDCGGG VDI+A ++IS P L+++ GG +GST VD F+ +LK +LG + + R+L S +S WE K + D R++ SEL+ +VT ++M+ R N G +VGG G F++ L L+ FF+ K
Sbjct: 104 HTDFASVMTESVEARHTVPLLGVMTASLRYFKEDVLGCLSRTGGRTVDVNRVNWVLTVPAIYDDFAKRFMRQAAFEAGMIDRVHSTR-LRLCLEPEAACLAAIVKDNPLTSDATDKKMMVIDCGGGIVDITAHKIISVEPLILDEVAAPDGGLFGSTRVDHAFKVWLK-EFLGDKFQGIQTT------RTLVSIMSS---------WESKKATFQGTDSAAGLRLNFSELAE--YDVTIQDMENLRTSYNDGKPPSLHVGG-GKFNVTLPTTLVTSFFEPTLDK 367 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16163.4492.1 >prot_Ecto-sp13_S_contig16163.4492.1 ID=prot_Ecto-sp13_S_contig16163.4492.1|Name=mRNA_Ecto-sp13_S_contig16163.4492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=281bp KPSQQIYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHAback to top mRNA from alignment at Ecto-sp13_S_contig16163:86..3212- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16163.4492.1 ID=mRNA_Ecto-sp13_S_contig16163.4492.1|Name=mRNA_Ecto-sp13_S_contig16163.4492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3127bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16163:86..3212- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16163:86..3212- >mRNA_Ecto-sp13_S_contig16163.4492.1 ID=mRNA_Ecto-sp13_S_contig16163.4492.1|Name=mRNA_Ecto-sp13_S_contig16163.4492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=843bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16163:86..3212- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |