mRNA_Ecto-sp13_S_contig1615.4483.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1615.4483.1
Unique NamemRNA_Ecto-sp13_S_contig1615.4483.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: A0A6H5KZP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE)

HSP 1 Score: 597 bits (1539), Expect = 8.630e-211
Identity = 287/322 (89.13%), Postives = 292/322 (90.68%), Query Frame = 1
Query:    1 PPSLGECVIFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ 966
            PPS GE VIFVKTLTGKTV+LVVGSYNTIADIK MMQD EGIPPDQQRLIFAG QLEDGL  SFYNIQGNSTL LVLRLRGGGFA PPIAVGAKF DVSDSSGLTEHAFS+ APRWRVAEPGLCLEGRCTN +CDAHGRMVILNHG RDFDLIRPGR PKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGEV+WDRLLIQARPLLKLEQRVPSAP ADERVERPNT   +ATSTVA  IDHTWGRC      SAFGAT ASDETVL CGHRFHTRCL GWEQGSMIVCPICREES PLPQ
Sbjct:  264 PPSCGEYVIFVKTLTGKTVKLVVGSYNTIADIKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQGNSTLHLVLRLRGGGFAAPPIAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGEVEWDRLLIQARPLLKLEQRVPSAPPADERVERPNTTAISATSTVADVIDHTWGRCXXXXXXSAFGATSASDETVLDCGHRFHTRCLTGWEQGSMIVCPICREESWPLPQ 585          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: D7G3U0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U0_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 6.850e-135
Identity = 181/202 (89.60%), Postives = 183/202 (90.59%), Query Frame = 1
Query:  361 PGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ 966
            P LCLEGRCTNR CDAHGRMVILNH FRDFDLIRPGR PKRCPMCN EVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRF+  GEVQWDRLLIQ RPLLKLEQRVPSAP ADER+ERPNT  NTATSTVAV IDHTW RCT     SAFGATPASDETVL CGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ
Sbjct:   18 PRLCLEGRCTNRQCDAHGRMVILNHAFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGEVQWDRLLIQVRPLLKLEQRVPSAPPADERMERPNTTANTATSTVAVVIDHTWSRCTXXXXXSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ 219          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: D7FKZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ7_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 2.880e-73
Identity = 131/317 (41.32%), Postives = 176/317 (55.52%), Query Frame = 1
Query:   25 IFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQG--------NSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLAGWEQG-SMIVCPICREE 948
            I ++TLTGKT+ + V S +T+ D+K ++QD EGIP +QQ LIF G+++ED      Y +Q          + + LVLR+RGGG           FADVS+ + +     S   P+WR   PGLC+EG C N  CDA G+MVI   G++DF+L+     P  CP+C+  V P TCAF  C WRY G+K G + V+   W    D Y RF G+  V+WD LLIQARPL              + V+  NT TNT    V V ID+T+  CT C D    G        VL CGH FH +C+ GW +G + +VCP CR++
Sbjct:   85 IGIRTLTGKTIFIDVSSSSTLGDVKGLIQDDEGIPSEQQHLIFNGKEMEDVNTLIDYGVQPIDPLDYDVKNLVHLVLRIRGGGXXXXX-----DFADVSNPNTMQTLQVSRGGPKWRRIRPGLCIEGMCRNERCDARGQMVISPRGYKDFNLVAGETVP--CPVCDEGVEPKTCAFYQCMWRYVGKKDGISTVMSSSWGRVTDKYTRFSGKKVVKWDHLLIQARPL--------------DLVKPVNTTTNT----VRVHIDYTYLECTICIDDIERG----QKTIVLTCGHHFHAKCIRGWAKGGTKVVCPNCRQK 372          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: A0A225VQY5_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.810e-70
Identity = 131/323 (40.56%), Postives = 178/323 (55.11%), Query Frame = 1
Query:    1 PPSLGECVIFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEA-GDSYHRFDG---RGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLAGWEQ-----GSMIVCPICR 942
            P ++    I++KTLTGKT+++   S ++I ++K  +QD++G PPDQQRLIFAG+ LEDG     Y I   S++  VLRLRGGG    P+     FADVSD+S L EH FS +AP+WR    GL +EGRC NR C A G+M+I  + F  F+L+R  R    CPMC  +V P TC F DC W++ G ++ +   +   WK+A G+ YHRFD     G V+WD LLI  +P  +       A  A  +V       N +TS    E +      T C  C +   T A +     C H FHT C+  W Q      S+  CP+CR
Sbjct:   67 PLNMAAAFIYIKTLTGKTLKIHCTSTDSIDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGIFHGSSVCQVLRLRGGG---GPLT-SMYFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLMRGDRA--HCPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFDADEKHGSVEWDSLLIMVKPRGEAASAKIIASPAIHQV-------NASTSDSEQESE------TICPICWSIAETVAGETITTHCEHTFHTSCIQEWAQWCSRHDSLPSCPVCR 370          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: A0A6A3GVD8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GVD8_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.420e-66
Identity = 127/320 (39.69%), Postives = 174/320 (54.37%), Query Frame = 1
Query:   13 GECVIFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDS-YHRFDG---RGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLAGWEQ-----GSMIVCPICRE 945
            G+ V+ +K+LTGK         ++I ++KL +QDK GIPPDQQRLI AG QL+DG   S Y I+  S LL+ LRLRGGG   PP  V   F DVSD+S LTE + SN+AP WRV + GL +EG C NR C+A G+MVI  +GF  F+L+  G     CP C     P TC F  C W+++G ++ +   +   W+ AG+S YHRFD     G V+W+ LLI           V  + +    V+ P T     T ++ V  D+    C      S FG+T     +   CGH FH  C+  W +      ++  CP+CR+
Sbjct:  116 GDLVLTIKSLTGKIAIFCAMPSDSIDNVKLRIQDKWGIPPDQQRLICAGVQLQDGRALSDYKIKTGSELLVFLRLRGGGGPRPPRKV---FVDVSDNSNLTEQSLSNEAPDWRVCDEGLNIEGECENRECEAFGQMVIYQYGFDSFNLM--GDRDVECPKCYETFTPITCGFYKCVWKFEGVRSSDGYFISSPWQNAGESKYHRFDSDENSGSVEWNSLLI-----------VVKSRRESTAVKIPAT-----TRSMIVRKDNVCSICW-----SRFGSTAKRTMSTAKCGHTFHRECINKWSEWCSSHDALPSCPLCRQ 409          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: S4W648_9VIRU (Ubiquitin n=1 Tax=Pandoravirus salinus TaxID=1349410 RepID=S4W648_9VIRU)

HSP 1 Score: 228 bits (581), Expect = 3.320e-66
Identity = 121/310 (39.03%), Postives = 166/310 (53.55%), Query Frame = 1
Query:   25 IFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRF--DGRGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLAGWEQGSMIVCPICREE 948
            +FV+TLTGK + +     N+I +IK ++ DKEG+PPDQQRL++AG+Q+EDG   + Y I+  +++ LVLRLRGGG  PP     A F D+ ++  +    +S  AP WR+ +PGLC+EGRC N  C A+GRMVI+N GF  FDL+        CP C+  V P TCAF +C W++ G K G++    G W  A D+YH F  D  G V+W RLLI+AR +                   P  A +     +    D     C    + S           VL CGH FH+ C+  W   S   CP CR +
Sbjct:  344 LFVQTLTGKVITIEAAPANSIEEIKCIIHDKEGLPPDQQRLLYAGQQMEDGRRLADYAIRAEASMHLVLRLRGGGGGPP---ASATFVDMENTGAMQCRQWSKSAPDWRIVKPGLCIEGRCKNVGCAAYGRMVIVNKGFDTFDLLLDA-DTCACPECDKHVKPKTCAFNNCWWKWNGIKEGDSRKYAGKWTLADDNYHCFAEDEAGSVEWTRLLIRARSI-------------------PKVAKSGGNEPIGKPFDMFCCICISSINSSGV-------HKVLDCGHAFHSPCIDAWVARSP-TCPHCRHK 622          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: A0A6A3IE52_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA)

HSP 1 Score: 213 bits (542), Expect = 8.410e-63
Identity = 129/317 (40.69%), Postives = 165/317 (52.05%), Query Frame = 1
Query:   16 ECVIFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWK-EAGDSYHRFDG---RGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLAGWE-----QGSMIVCPIC 939
              +I++KTLTGKT  +   + NTI +IK  +Q++EGIPPDQQR+IFAG+QLEDG   S YNIQ  STL LVLRLRGG   P        FADVSD S   EH FS  AP WR+   GL +EGRC NR C A+  +VI   GF  F+L + G     CP C  +V P TC F DC W+++G KA         W+  +G+ Y RFD     G ++W+ LLI  +PL +          A E VE    A             H+   C  C      G+   S+     CGH FH  C+  W      Q ++  CP+C
Sbjct:  101 SAMIYIKTLTGKTTHVNCHAANTIEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQYGSTLHLVLRLRGGYVEP------RCFADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLRKDG--DVTCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFDADETSGSIEWESLLILVKPLKEA--------VAAELVESAQEARL-----------HSDLVCAVCWTEILSGSGAGSE-----CGHLFHCGCIENWSKWSEGQKTLTKCPVC 385          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: A0A815UV84_9BILA (Hypothetical protein n=6 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A815UV84_9BILA)

HSP 1 Score: 199 bits (505), Expect = 2.280e-59
Identity = 102/222 (45.95%), Postives = 137/222 (61.71%), Query Frame = 1
Query:   25 IFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFD-LIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETN----VLVGMWKEAGDSYHRFDGR--GEVQWDRLLIQA 669
            +F+KT T KT+ +     +TI ++K  +Q KEGIPPDQQR+IF G+QLEDG   + YNIQ   TL +V+RLRGG        +G  F D+S+ SGL    +S  AP+WR A PGLCLEG+CTNRNC A+ + VI+N  F+ FD L+   +   +CP+C   V P+TC F  C W +KG K G          G W EA ++YH FD +  G V W +L+I+A
Sbjct:    3 VFIKTHTCKTLTIECECSDTIENLKYKIQGKEGIPPDQQRIIFGGKQLEDGRTLADYNIQKEFTLHMVIRLRGGD-------MGVDFVDLSNGSGLKRLNWSTSAPKWRKAGPGLCLEGQCTNRNCKAYSQAVIMNIRFKKFDMLLDVNQTTCQCPICKEYVKPNTCGFNRCWWCWKGIKEGGAGEPPKACSGNWTEADNAYHYFDEKISGSVTWRQLIIEA 217          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: L8HGQ1_ACACA (Ubiquitin domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGQ1_ACACA)

HSP 1 Score: 204 bits (520), Expect = 2.160e-57
Identity = 127/323 (39.32%), Postives = 171/323 (52.94%), Query Frame = 1
Query:   25 IFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRY----KGRKAGETNVLVGMW--------KEAGDSYHRF--DGRGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDET-VLGCGHRFHTRCLAGWEQGSMIVCPICREE 948
            IF KTLTGKT+ L  G  + I ++K++++ KEGIP DQQRL+FAG+QLEDG     Y I   STL LVLRLRGGG     +  G+ F D+S+++ L    +S+ AP+WRVA PGL +EG CTNR C+A  R VI+N     FDL+        CP C   V P+TCAF +C W++    KG +AG+  + + +W        ++A ++YHRF  D  G V+W RLLI  + + + E         D  V R              E+         C  C       A++E   L CGH FH  CL  W   S   CP CR +
Sbjct:  332 IFCKTLTGKTITLEAGPAHPITEVKVLVEAKEGIPADQQRLLFAGKQLEDGTCLGDYAIDRESTLQLVLRLRGGG-----LTAGSLFVDMSNTNALERRQWSSKAPQWRVAMPGLSVEGVCTNRECEAFDRSVIINKHHGTFDLLLDAH-TCHCPSCGSYVEPATCAFNNCWWKWSGIKKGARAGQPPLHM-VWLHLSTNNREQADNAYHRFSEDKAGTVEWLRLLIHTKRIQECE---------DSAVPRK-----------PFEMF--------C--CICICDIKATEEVKTLACGHAFHPPCLDEWTARSP-TCPYCRRD 616          
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Match: A0A6A3QTI6_9STRA (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3QTI6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 8.790e-57
Identity = 126/316 (39.87%), Postives = 156/316 (49.37%), Query Frame = 1
Query:   22 VIFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLIFAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSDSSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDFDLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEA-GDSYHRFDG---RGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTATNTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLAGWE-----QGSMIVCPICR 942
            ++F +TL+ KT  +   S +T+  IK  ++ KEGIPP+ QRL +AG+QL   LP SFYNI+  STL L  R+ GG   PP       FADVSD S LT   FS DAP WR    GL +EGRC NRNC A  RM+I    F  F+LIR      RCP+C   V   TC   DC WR++G KA         W+EA G  YHRFD     G V+W  L+I  +P        P+   A   +         +T +V V    T   C      S FG+ P    T   CGH FH  C   W        +   CPICR
Sbjct:  106 MVFFRTLSRKTATIECTSTDTVGYIKARIEAKEGIPPEDQRLTYAGKQLRGDLPLSFYNIRNESTLHLSARVLGGFTIPP-----RTFADVSDGSILTAVEFSPDAPEWRWCSQGLNIEGRCLNRNCRAFRRMIIDRKKFEVFNLIRDDN--VRCPICKTNVKLITCGLYDCCWRFEGVKANTRMCSSSPWEEARGYVYHRFDADENNGSVEWTSLVITTKP--------PTEAVAAWLM--------LSTESVGVSEGDTCSICW-----SPFGS-PVKRLTTTLCGHSFHRACSQKWSASCKHNNTEPSCPICR 392          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1615.4483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZP2_9PHAE8.630e-21189.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3U0_ECTSI6.850e-13589.60RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FKZ7_ECTSI2.880e-7341.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A225VQY5_9STRA1.810e-7040.56Ubiquitin family protein n=1 Tax=Phytophthora mega... [more]
A0A6A3GVD8_9STRA1.420e-6639.69Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
S4W648_9VIRU3.320e-6639.03Ubiquitin n=1 Tax=Pandoravirus salinus TaxID=13494... [more]
A0A6A3IE52_9STRA8.410e-6340.69Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A815UV84_9BILA2.280e-5945.95Hypothetical protein n=6 Tax=Rotaria magnacalcarat... [more]
L8HGQ1_ACACA2.160e-5739.32Ubiquitin domain containing protein n=1 Tax=Acanth... [more]
A0A6A3QTI6_9STRA8.790e-5739.87Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1615contigEcto-sp13_S_contig1615:14234..15202 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score236.9
Seed ortholog evalue1.3e-59
Seed eggNOG ortholog2880.D7FKZ7
Model size969
KEGG koko:K02983
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.protein tag
EggNOG OGsCOG1552@1,KOG0003@2759
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-00_007020.1
Cds size969
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462852.2053535-CDS-Ecto-sp13_S_contig1615:14233..152021681462852.2053535-CDS-Ecto-sp13_S_contig1615:14233..15202Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1615 14234..15202 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1615.4483.1prot_Ecto-sp13_S_contig1615.4483.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1615 14234..15202 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1615.4483.1

>prot_Ecto-sp13_S_contig1615.4483.1 ID=prot_Ecto-sp13_S_contig1615.4483.1|Name=mRNA_Ecto-sp13_S_contig1615.4483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
PPSLGECVIFVKTLTGKTVELVVGSYNTIADIKLMMQDKEGIPPDQQRLI
FAGRQLEDGLPFSFYNIQGNSTLLLVLRLRGGGFAPPPIAVGAKFADVSD
SSGLTEHAFSNDAPRWRVAEPGLCLEGRCTNRNCDAHGRMVILNHGFRDF
DLIRPGRGPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKE
AGDSYHRFDGRGEVQWDRLLIQARPLLKLEQRVPSAPQADERVERPNTAT
NTATSTVAVEIDHTWGRCTRCTDCSAFGATPASDETVLGCGHRFHTRCLA
GWEQGSMIVCPICREESSPLPQ*
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mRNA from alignment at Ecto-sp13_S_contig1615:14234..15202-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1615.4483.1 ID=mRNA_Ecto-sp13_S_contig1615.4483.1|Name=mRNA_Ecto-sp13_S_contig1615.4483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=969bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1615:14234..15202- (Ectocarpus species13 EcNAP12_S_4_19m)
CCTCCCTCGCTTGGAGAGTGTGTGATCTTCGTCAAGACCCTCACCGGGAA AACTGTCGAGCTTGTCGTCGGCTCGTACAACACGATCGCCGACATTAAAC TAATGATGCAAGACAAGGAGGGGATCCCGCCCGACCAGCAGCGGCTGATA TTCGCCGGCAGGCAGCTGGAGGACGGTCTTCCGTTTTCATTTTACAACAT CCAAGGAAATTCTACTCTTCTATTGGTCCTTCGGTTGAGGGGAGGTGGAT TCGCTCCTCCCCCCATTGCCGTTGGCGCCAAGTTTGCCGACGTTTCCGAC TCGTCCGGCCTCACAGAGCACGCCTTCTCGAACGACGCCCCGCGCTGGAG GGTTGCCGAGCCCGGGCTGTGCCTGGAAGGAAGGTGCACCAACCGCAACT GCGACGCTCACGGCCGCATGGTCATCCTCAACCATGGGTTCCGGGACTTC GACCTGATCCGGCCCGGCAGAGGCCCGAAGCGCTGCCCAATGTGCAACTT CGAGGTGGTTCCGAGCACGTGTGCCTTCACCGACTGCACGTGGAGGTACA AGGGGCGGAAGGCCGGGGAGACCAACGTCCTGGTCGGCATGTGGAAAGAG GCCGGCGATAGCTACCACCGGTTCGATGGACGGGGTGAGGTGCAGTGGGA CAGGCTGCTCATCCAGGCCAGGCCCCTGCTCAAGCTCGAACAACGTGTCC CTTCCGCACCACAGGCGGACGAGAGGGTGGAACGTCCCAACACGGCAACC AATACCGCTACGTCAACCGTAGCAGTCGAGATCGACCACACATGGGGTCG ATGTACGAGGTGCACGGATTGTTCCGCGTTCGGGGCAACCCCTGCGTCCG ACGAGACGGTCCTGGGTTGTGGCCACCGGTTCCACACTAGGTGCCTCGCG GGCTGGGAGCAGGGCTCGATGATCGTTTGTCCCATCTGCCGTGAAGAGTC GTCGCCGCTGCCTCAGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1615:14234..15202-

>mRNA_Ecto-sp13_S_contig1615.4483.1 ID=mRNA_Ecto-sp13_S_contig1615.4483.1|Name=mRNA_Ecto-sp13_S_contig1615.4483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=969bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1615:14234..15202- (Ectocarpus species13 EcNAP12_S_4_19m)
CCTCCCTCGCTTGGAGAGTGTGTGATCTTCGTCAAGACCCTCACCGGGAA
AACTGTCGAGCTTGTCGTCGGCTCGTACAACACGATCGCCGACATTAAAC
TAATGATGCAAGACAAGGAGGGGATCCCGCCCGACCAGCAGCGGCTGATA
TTCGCCGGCAGGCAGCTGGAGGACGGTCTTCCGTTTTCATTTTACAACAT
CCAAGGAAATTCTACTCTTCTATTGGTCCTTCGGTTGAGGGGAGGTGGAT
TCGCTCCTCCCCCCATTGCCGTTGGCGCCAAGTTTGCCGACGTTTCCGAC
TCGTCCGGCCTCACAGAGCACGCCTTCTCGAACGACGCCCCGCGCTGGAG
GGTTGCCGAGCCCGGGCTGTGCCTGGAAGGAAGGTGCACCAACCGCAACT
GCGACGCTCACGGCCGCATGGTCATCCTCAACCATGGGTTCCGGGACTTC
GACCTGATCCGGCCCGGCAGAGGCCCGAAGCGCTGCCCAATGTGCAACTT
CGAGGTGGTTCCGAGCACGTGTGCCTTCACCGACTGCACGTGGAGGTACA
AGGGGCGGAAGGCCGGGGAGACCAACGTCCTGGTCGGCATGTGGAAAGAG
GCCGGCGATAGCTACCACCGGTTCGATGGACGGGGTGAGGTGCAGTGGGA
CAGGCTGCTCATCCAGGCCAGGCCCCTGCTCAAGCTCGAACAACGTGTCC
CTTCCGCACCACAGGCGGACGAGAGGGTGGAACGTCCCAACACGGCAACC
AATACCGCTACGTCAACCGTAGCAGTCGAGATCGACCACACATGGGGTCG
ATGTACGAGGTGCACGGATTGTTCCGCGTTCGGGGCAACCCCTGCGTCCG
ACGAGACGGTCCTGGGTTGTGGCCACCGGTTCCACACTAGGTGCCTCGCG
GGCTGGGAGCAGGGCTCGATGATCGTTTGTCCCATCTGCCGTGAAGAGTC
GTCGCCGCTGCCTCAGTAG
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