mRNA_Ecto-sp13_S_contig1615.4481.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: D7G3U2_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U2_ECTSI) HSP 1 Score: 275 bits (704), Expect = 1.510e-89 Identity = 166/170 (97.65%), Postives = 166/170 (97.65%), Query Frame = 1
Query: 1 MKNNAASRSRRGSPSPAXXXXXXXXXXXXXXXXXXXXXXXX----GVKGTDPDAGGAWPEEPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 498
MKNNAASRSRRGSPSPAXXXXXXXXXXXXXXXXXXXXXXXX GVKGTDPDAGGAWPEEPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV
Sbjct: 1 MKNNAASRSRRGSPSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVKGTDPDAGGAWPEEPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 170
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: A0A7S4D8W8_HETAK (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8W8_HETAK) HSP 1 Score: 187 bits (474), Expect = 6.740e-52 Identity = 88/112 (78.57%), Postives = 99/112 (88.39%), Query Frame = 1
Query: 163 PEEPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 498
P E +G P +MK+ IL MICALAFFIRLFAVVRYESVIHEFDPYFNFRTTK+LA+EGFLDFL+WFDDRGWYPLGRTIGGTIYPGLM TAAS +W L+A++ITINIRN+
Sbjct: 54 PSAETEDISGLPNIMKFGILGMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKYLASEGFLDFLDWFDDRGWYPLGRTIGGTIYPGLMLTAASIHWALNAINITINIRNM 165
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: A0A835Z1M3_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M3_9STRA) HSP 1 Score: 186 bits (473), Expect = 8.290e-52 Identity = 87/111 (78.38%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 166 EEPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 498
E+ E TG P ++KYAIL MICA+AF IRLFAVVRYESVIHEFDPYFNFRTTK+L EGFLDFL+WFDDRGWYPLGRTIGGTIYPGLM TAA YW+L AL+ T+NIRNV
Sbjct: 25 EDEVEQLTGLPVLLKYAILLMICAMAFLIRLFAVVRYESVIHEFDPYFNFRTTKYLTAEGFLDFLDWFDDRGWYPLGRTIGGTIYPGLMLTAAVLYWLLQALNFTVNIRNV 135
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: A0A7S2XUN5_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUN5_9STRA) HSP 1 Score: 174 bits (441), Expect = 8.830e-52 Identity = 83/107 (77.57%), Postives = 95/107 (88.79%), Query Frame = 1
Query: 178 EIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 498
E +G V + AIL +ICALAF IRLFAVVRYESVIHEFDPYFNFRTTK+LA+EGFLDFL+WFDDRGWYPLGRTIGGTIYPGLM TAA+ +W L+A++ITINIRN+
Sbjct: 45 EELSGLSVVFRAAILFLICALAFSIRLFAVVRYESVIHEFDPYFNFRTTKYLASEGFLDFLDWFDDRGWYPLGRTIGGTIYPGLMLTAATIHWALNAVNITINIRNM 151
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: A0A7S3H9K2_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9K2_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.920e-51 Identity = 86/110 (78.18%), Postives = 98/110 (89.09%), Query Frame = 1
Query: 169 EPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 498
EP ++ +G P V+K+ IL +IC LAF IRLFAVVRYESVIHEFDPYFNFRTTK+LA EGFL+FLNWFDDRGWYPLGRTIGGTIYPGLM TAA FYW++H LH+TINIRN+
Sbjct: 40 EPEDL-SGIPTVLKFTILGLICLLAFSIRLFAVVRYESVIHEFDPYFNFRTTKYLAHEGFLEFLNWFDDRGWYPLGRTIGGTIYPGLMLTAAVFYWVMHFLHLTINIRNM 148
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: A0A7S1U4D8_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4D8_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.090e-47 Identity = 84/116 (72.41%), Postives = 95/116 (81.90%), Query Frame = 1
Query: 151 GGAWPEEPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 498
G P+ P E + V L MICALAFFIRLFAVVRYESVIHEFDPYFNFRTTK+LA+EGF+DFLNWFDDRGWYPLGRTIGGTIYPGLM TAA YW+L+ L+I++NIRN+
Sbjct: 45 GNGLPKAPVEELHEWSKVYAAVTLGMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKYLASEGFMDFLNWFDDRGWYPLGRTIGGTIYPGLMYTAAVLYWLLNFLNISVNIRNM 160
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: A0A6U0UCW9_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UCW9_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.490e-47 Identity = 84/125 (67.20%), Postives = 98/125 (78.40%), Query Frame = 1
Query: 124 GVKGTDPDAGGAWPEEPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 498
G++ + + G P P E + V +L MIC LAFFIRLFAVVRYESVIHEFDPYFNFRTTK+LA+EGFLDFLNWFDDRGWYPLGRTIGGTIYPGLM TAA YW+L+ +I++NIRN+
Sbjct: 35 GIRPLEENFGNGLPSIPDEELGEWSKVYAAVVLIMICTLAFFIRLFAVVRYESVIHEFDPYFNFRTTKYLASEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMYTAAMLYWLLNFFNISVNIRNM 159
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: A0A067CQQ4_SAPPC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CQQ4_SAPPC) HSP 1 Score: 162 bits (410), Expect = 7.450e-47 Identity = 74/98 (75.51%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 202 VMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRN 495
V+KY +LA IC ++F IRLF+VVRYESVIHEFDPYFNFRTTK+LA+EGFL+FL+WFDDR WYPLGR IGGTIYPGLM TAA YW+L+ L+I+IN+RN
Sbjct: 60 VLKYGLLAAICLMSFSIRLFSVVRYESVIHEFDPYFNFRTTKYLASEGFLEFLDWFDDRAWYPLGRIIGGTIYPGLMYTAALVYWVLNWLNISINVRN 157
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: A0A3M6VAL3_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAL3_9STRA) HSP 1 Score: 171 bits (432), Expect = 3.340e-46 Identity = 79/111 (71.17%), Postives = 93/111 (83.78%), Query Frame = 1
Query: 163 PEEPAEIRTGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRN 495
P +P + V K+AILAMIC ++F IRLFAVVRYESVIHEFDPYFNFRTTK+LA+EGFL+FL+WFDDR WYPLGR IGGTIYPGLM TAA YW+L+ L+I+IN+RN
Sbjct: 48 PRDPEDDMNALTPVAKFAILAMICLMSFSIRLFAVVRYESVIHEFDPYFNFRTTKYLASEGFLEFLDWFDDRAWYPLGRIIGGTIYPGLMYTAALMYWVLNVLNISINVRN 158
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Match: I2CR01_NANGC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CR01_NANGC) HSP 1 Score: 170 bits (430), Expect = 6.530e-46 Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 1
Query: 187 TGFPAVMKYAILAMICALAFFIRLFAVVRYESVIHEFDPYFNFRTTKFLATEGFLDFLNWFDDRGWYPLGRTIGGTIYPGLMATAASFYWILHALHITINIRNV 498
+G P +++Y IL +IC L+F IRLFAVVRYESVIHEFDPYFNFRTTK+LA+EGFL+FL+WFDDRGWYPLGR IGGTIYPGLM TAA YW+L+ ++T+NIR V
Sbjct: 57 SGIPVIVRYGILGLICLLSFAIRLFAVVRYESVIHEFDPYFNFRTTKYLASEGFLEFLDWFDDRGWYPLGRIIGGTIYPGLMFTAAVMYWVLNFFNVTVNIREV 160 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1615.4481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1615.4481.1 >prot_Ecto-sp13_S_contig1615.4481.1 ID=prot_Ecto-sp13_S_contig1615.4481.1|Name=mRNA_Ecto-sp13_S_contig1615.4481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp MKNNAASRSRRGSPSPAAAPPSTAVQKPKSSSSYATIGGGGGVKGTDPDAback to top mRNA from alignment at Ecto-sp13_S_contig1615:349..3541- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1615.4481.1 ID=mRNA_Ecto-sp13_S_contig1615.4481.1|Name=mRNA_Ecto-sp13_S_contig1615.4481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3193bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1615:349..3541- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1615:349..3541- >mRNA_Ecto-sp13_S_contig1615.4481.1 ID=mRNA_Ecto-sp13_S_contig1615.4481.1|Name=mRNA_Ecto-sp13_S_contig1615.4481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1615:349..3541- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |