prot_Ecto-sp13_S_contig16148.4479.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16148.4479.1
Unique Nameprot_Ecto-sp13_S_contig16148.4479.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length602
Homology
BLAST of mRNA_Ecto-sp13_S_contig16148.4479.1 vs. uniprot
Match: A0A6H5L2G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G4_9PHAE)

HSP 1 Score: 556 bits (1433), Expect = 2.520e-189
Identity = 332/376 (88.30%), Postives = 338/376 (89.89%), Query Frame = 0
Query:    1 GHNTGTNTSN-NRGSTRCLEAIAVVLNQSSPKGGIREPPFISSTLQLQLACLELCAVCRSLPSLHIKVPETLPASLWVAATSSDDAGDHDNGVQWQDLLSTLRSLRRWYPRGDSRRRDGVTLNRVPPLLPFSVTCGLSSLPRSSSSRTADLWTGVERLRLEFSLSETSSWKDSSVVMLPRRLKQLLFVSSSFVPNFQLPVAVLSSPPPLLLKLFVNGSFEVPVVDVPWPPSLTQLSFGARFQQRLGRGGA---GSXXXXXXXGGVIKXXXXXXXXXXWHHFQEPIAEINWPASLERLAFFGPGFNEPLDGVVSSWPSLRKLVLXXXXXXXXXXXXXXXXLRALRFGDXXXXXXXXXXXXXXXQELSLXGGXDGTVE 372
            GHNTG  + N NRGSTRC+EAIAVVLNQSSP+GGIREPPFISSTLQLQLACLELC VCRSLPSLH+KVPETLPA L VA TS DDAGDHDNGVQWQDL STLRSLRRWYP GDSR+ DGVTLNRVPPLLPFSVTCGLSSLPRSSSSRTADLWTGVERLRLEFSLSETSSWKDSSVVMLPRRLKQLLFVSSSFVPNFQLPVAVLSSPPPLLLKLFVNGSFEVPV DVPWPPSLTQLSFGARFQQRLGRGGA   G        GGVIKXXXXXXXXXXWHHFQEP+AEINWPASLERLAFFGPGFNEPL GVVSSWPSLRK   XXXXXXXXXXXXXX  LRAL FG XXXXXXXXXXXXXXX   S XGGXD  VE
Sbjct:   23 GHNTGNISDNDNRGSTRCMEAIAVVLNQSSPRGGIREPPFISSTLQLQLACLELCGVCRSLPSLHVKVPETLPACLSVAPTSDDDAGDHDNGVQWQDLFSTLRSLRRWYPGGDSRQGDGVTLNRVPPLLPFSVTCGLSSLPRSSSSRTADLWTGVERLRLEFSLSETSSWKDSSVVMLPRRLKQLLFVSSSFVPNFQLPVAVLSSPPPLLLKLFVNGSFEVPVADVPWPPSLTQLSFGARFQQRLGRGGACSAGDGDSDGGGGGVIKXXXXXXXXXXWHHFQEPVAEINWPASLERLAFFGPGFNEPLAGVVSSWPSLRKXXXXXXXXXXXXXXXXXASLRALEFGXXXXXXXXXXXXXXXXXXXSXXGGXDDIVE 398          
BLAST of mRNA_Ecto-sp13_S_contig16148.4479.1 vs. uniprot
Match: A0A6H5K4H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H2_9PHAE)

HSP 1 Score: 456 bits (1174), Expect = 5.690e-151
Identity = 250/326 (76.69%), Postives = 271/326 (83.13%), Query Frame = 0
Query:    1 GHNTGTNTSNN----RGSTRCLEAIAVVLNQSSPKGGIREPPFISSTLQLQLACLELCAVCRSLPSLHIKVPETLPASLWVAATSSDDAGDHDNGVQWQDLLSTLRSLRRWYPRGDSRRRDGVTLNRVPPLLPFSVTCGLSSLPRSSSSRTADLWTGVERLRLEFSLSETSSWKDSSVVMLPRRLKQLLFVSSSF------VPNFQLPVAVLSSPPPLLLKLFVNGSFEVPVVDVPWPPSLTQLSFGARFQQRLGRGGAGSXXXXXXXGGVIKXXXXXXXXXXWHHFQEPIAEINWPASLERLAFFGPGFNEPLDGVVSSWPSLRK 316
            GHNTGT+TSNN    RGS RCLEAI VVLNQSSPKGGIREPPFISSTLQLQLACLELC VCRSLPSLHI V ETLP+SLWVA TSSDDAGDHD+GV        L SLRR YPRG  R +DGVT NRVPPLLPFSVTCG +SLP SSSSRTAD W GVERLRLEFS+SE  +WK+S +V+LP RLK LL +SS F      + N++LPVAVLSSPPPLLLKLFVNGSFEVPV DVPWPPSL Q+SFG+RFQQRLGRGGAGS        GVIKXXXXXXXXXX H F+EPIAE++WP+SLERLAFFGPGFNEPL GVV+SWPSLRK
Sbjct:   23 GHNTGTDTSNNDNDDRGSARCLEAITVVLNQSSPKGGIREPPFISSTLQLQLACLELCRVCRSLPSLHITVRETLPSSLWVAPTSSDDAGDHDDGV-------LLPSLRRCYPRGGMRGKDGVTPNRVPPLLPFSVTCGYASLPLSSSSRTADRWAGVERLRLEFSVSEIENWKESPLVVLPGRLKHLLLISSYFDFVQNRIGNYRLPVAVLSSPPPLLLKLFVNGSFEVPVADVPWPPSLIQISFGSRFQQRLGRGGAGSAVD-----GVIKXXXXXXXXXXRHQFEEPIAEVSWPSSLERLAFFGPGFNEPLAGVVASWPSLRK 336          
BLAST of mRNA_Ecto-sp13_S_contig16148.4479.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 3.690e-8
Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 0
Query:   13 GSTRCLEAIAVVLNQSSPKGGIREPPFISSTLQLQLACLELCAVCRSLPSLHIKVPETLPASLWVAATSSDDAGDHDNGVQWQDLLSTLRSLRR----WYPRGDSRRRDGVTLNRV 124
            G +RCL+A  V LNQ+   GG     +  ST QLQL+ L  C  CRS+P++H+KV  + PA L+     +    D  +G   + + + + +LR     W   G++ R  GV L+ V
Sbjct:   26 GPSRCLDAFKVALNQACDGGG-----WYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVGLSSV 136          
BLAST of mRNA_Ecto-sp13_S_contig16148.4479.1 vs. uniprot
Match: A0A6H5JHB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHB0_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.070e-6
Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0
Query:   13 GSTRCLEAIAVVLNQSSPKGGIREPPFISSTLQLQLACLELCAVCRSLPSLHIKVPETLPASLW 76
            G +RCL+A A+ L+Q+    G R   +  STLQLQ  CL LC+ CRS+P+ H+++ +  P SLW
Sbjct:  139 GGSRCLDAFAITLHQAY---GGRRGHWYKSTLQLQCVCLALCSACRSVPTWHVRIDDQTPHSLW 199          
BLAST of mRNA_Ecto-sp13_S_contig16148.4479.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 3.270e-5
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0
Query:   13 GSTRCLEAIAVVLNQSSPKGGIREPPFISSTLQLQLACLELCAVCRSLPSLHIKVPETLPASLW 76
            G +RCL+A+ + LNQ+S  GG     + +ST+QLQLA LELCA CRS+  L + V    P  LW
Sbjct:    8 GPSRCLDALIIALNQAS--GG----EWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLW 65          
BLAST of mRNA_Ecto-sp13_S_contig16148.4479.1 vs. uniprot
Match: A0A6H5JR57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR57_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 8.620e-5
Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 0
Query:   12 RGSTRCLEAIAVVLNQS--SPKGGIREPPFISSTLQLQLACLELCAVCRSLPSLHIKVPETLPASLWV----AATSSDDAGD----HDNGVQWQ 95
            RG +R L+A+ V LNQ+  S  G      + +STL LQLA ++LC  CRS+P+L +K+    P SLW     A   S  +G       +GV+W+
Sbjct:   12 RGYSRFLDALTVALNQAYDSRAGDGDNIRWFTSTLNLQLASVDLCRACRSVPTLLVKIDHDTPRSLWTPTVYAGAYSAPSGRVPPLRAHGVRWE 105          
BLAST of mRNA_Ecto-sp13_S_contig16148.4479.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 8.820e-5
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    5 GTNTSNNRGSTRCLEAIAVVLNQSSPKGGIREPPFISSTLQLQLACLELCAVCRSLPSLHIKVPETLPASLW 76
            G +T+   G +RCL+A+ + LNQ+S  GG     + +ST+QLQL  LELCA CRS+  L + V    P  LW
Sbjct:   31 GRHTNVETGPSRCLDALIIALNQAS--GG----EWYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLW 96          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16148.4479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L2G4_9PHAE2.520e-18988.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4H2_9PHAE5.690e-15176.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFC0_9PHAE3.690e-834.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHB0_9PHAE1.070e-645.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT95_ECTSI3.270e-548.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR57_9PHAE8.620e-538.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA08_9PHAE8.820e-544.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 258..583
e-value: 5.9E-12
score: 46.6
IPR008615FNIPPFAMPF05725FNIPcoord: 532..574
e-value: 2.6E-4
score: 21.1
coord: 414..456
e-value: 1.0E-6
score: 28.8
coord: 458..500
e-value: 1.3E-8
score: 34.8
coord: 323..364
e-value: 1.4E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 332..572
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 332..572
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 175..391
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 175..391
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 214..505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16148contigEcto-sp13_S_contig16148:1031..2878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16148.4479.1mRNA_Ecto-sp13_S_contig16148.4479.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16148 1031..2878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16148.4479.1 ID=prot_Ecto-sp13_S_contig16148.4479.1|Name=mRNA_Ecto-sp13_S_contig16148.4479.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=602bp
GHNTGTNTSNNRGSTRCLEAIAVVLNQSSPKGGIREPPFISSTLQLQLAC
LELCAVCRSLPSLHIKVPETLPASLWVAATSSDDAGDHDNGVQWQDLLST
LRSLRRWYPRGDSRRRDGVTLNRVPPLLPFSVTCGLSSLPRSSSSRTADL
WTGVERLRLEFSLSETSSWKDSSVVMLPRRLKQLLFVSSSFVPNFQLPVA
VLSSPPPLLLKLFVNGSFEVPVVDVPWPPSLTQLSFGARFQQRLGRGGAG
SAGDGDGDGGVIKWPVHLQQLSFWHHFQEPIAEINWPASLERLAFFGPGF
NEPLDGVVSSWPSLRKLVLGNTFNQPIAQVSWPASLRALRFGDTFNQPIA
QASWPASLQELSLGGGFDGTVEEVIWPSSLRKLDLGKRFSHPIARATWPA
SLEELAFGGCEGRFNQPIAQVAWPPSLRAVRFGEWFNQSIDRVSWPNGLQ
ELYFGGKFNQLIAQASWPASLRELAFGTDFNQPIDQVSWPASLQKLSFGK
YFNHPIAHVSWPGALRELIFGERFDQRFGEYFNQPIAQASWPDALQEIKF
GGDFSQRMIGTNWPMSLRKIYISKRSASGNRGSGRVSALCGNRELSLFCY
V*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP