prot_Ecto-sp13_S_contig16143.4477.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16143.4477.1
Unique Nameprot_Ecto-sp13_S_contig16143.4477.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length152
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16143.4477.1 vs. uniprot
Match: D7G758_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G758_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 2.460e-92
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0 
Query:    1 LLFGALFSYTISLLVNRQIKIEEIVNAEVSALLAIVLHMEDYFRYSPAALEASMEAVWRHTDTLIFQSRYQEILLLVQDDPLEDLMRLIIAVDDEVLASDAHRNKSGVHRDSLGYLRGLSSDLLKLRTTRLSSEGRVLPPVHFGILVILA 150
            LLFGALFSYTISLLVNRQIKIEEIVNAEVSALLAI+LHMEDYFRYSP ALEA+MEA WRHTDTLIFQSRYQEILLLVQDDPLEDLMRLIIAVDDEVLASDAHRNKSGVHRDSLGYLRG+SSDLLKLRTTRLSSEGRVLPPVHFGILVILA
Sbjct:   64 LLFGALFSYTISLLVNRQIKIEEIVNAEVSALLAILLHMEDYFRYSPVALEAAMEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMRLIIAVDDEVLASDAHRNKSGVHRDSLGYLRGVSSDLLKLRTTRLSSEGRVLPPVHFGILVILA 213
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16143.4477.1 vs. uniprot
Match: A0A6H5JLZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ7_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 9.820e-91
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0 
Query:    1 LLFGALFSYTISLLVNRQIKIEEIVNAEVSALLAIVLHMEDYFRYSPAALEASMEAVWRHTDTLIFQSRYQEILLLVQDDPLEDLMRLIIAVDDEVLASDAHRNKSGVHRDSLGYLRGLSSDLLKLRTTRLSSEGRVLPPVHFGILVILA 150
            LLFGALFSYTISLLVNRQIKIEEIVNAEVSALL+IVLHMEDYFRYSP ALEA+MEA WRHTDTLIFQSRYQEILLLVQDDPLEDLMRLIIAVDDEVLASDAHRNKSGVHRDSLGYLRG+SSDLLKLRTTRLSSEGRVLPPVHFGILVILA
Sbjct:  186 LLFGALFSYTISLLVNRQIKIEEIVNAEVSALLSIVLHMEDYFRYSPVALEAAMEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMRLIIAVDDEVLASDAHRNKSGVHRDSLGYLRGVSSDLLKLRTTRLSSEGRVLPPVHFGILVILA 335
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16143.4477.1 vs. uniprot
Match: A0A835YX84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX84_9STRA)

HSP 1 Score: 165 bits (417), Expect = 6.190e-47
Identity = 86/150 (57.33%), Postives = 113/150 (75.33%), Query Frame = 0 
Query:    1 LLFGALFSYTISLLVNRQIKIEEIVNAEVSALLAIVLHMEDYFRYSPAALEASMEAVWRHTDTLIFQSRYQEILLLVQDDPLEDLMRLIIAVDDEVLASDAHRNKSGVHRDSLGYLRGLSSDLLKLRTTRLSSEGRVLPPVHFGILVILA 150
            LLFG LFSYTISLLVNRQ +IEE+VN E++A+  ++ H+ D+F   P   E +++AVWRHTD LIF SRYQEIL LVQ D +E+LMR+II VD++  A + H  K  ++R+ LGYLR L +++ +LR  R+S+EGRVLPPVHF IL  LA
Sbjct:  106 LLFGTLFSYTISLLVNRQNRIEELVNQELAAMTTLLWHLIDFFDGDPEKREQALKAVWRHTDQLIFNSRYQEILALVQGDSIEELMRMIIRVDEKDTAQNTH--KPNINRELLGYLRPLGAEINRLRAMRISAEGRVLPPVHFFILGSLA 253
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16143.4477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G758_ECTSI2.460e-9296.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLZ7_9PHAE9.820e-9196.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YX84_9STRA6.190e-4757.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025333Protein of unknown function DUF4239PFAMPF14023DUF4239coord: 2..150
e-value: 1.1E-13
score: 51.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16143contigEcto-sp13_S_contig16143:778..3980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16143.4477.1mRNA_Ecto-sp13_S_contig16143.4477.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16143 778..3980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16143.4477.1 ID=prot_Ecto-sp13_S_contig16143.4477.1|Name=mRNA_Ecto-sp13_S_contig16143.4477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
LLFGALFSYTISLLVNRQIKIEEIVNAEVSALLAIVLHMEDYFRYSPAAL
EASMEAVWRHTDTLIFQSRYQEILLLVQDDPLEDLMRLIIAVDDEVLASD
AHRNKSGVHRDSLGYLRGLSSDLLKLRTTRLSSEGRVLPPVHFGILVILA
R*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025333DUF4239