mRNA_Ecto-sp13_S_contig16135.4474.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16135.4474.1
Unique NamemRNA_Ecto-sp13_S_contig16135.4474.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: D8LQM6_ECTSI (Obtusifoliol 14alpha-Demethylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQM6_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 1.160e-157
Identity = 223/227 (98.24%), Postives = 226/227 (99.56%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGDLPPPDFNAMVVGPKGKCTVRYTKKTA 681
            LQVFVDMKYKDG+TNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVL+REYKIEMVG+LPP DFNAMVVGPKGKCTVRYTKKTA
Sbjct:  264 LQVFVDMKYKDGSTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLLREYKIEMVGELPPADFNAMVVGPKGKCTVRYTKKTA 490          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A835YR70_9STRA (Obtusifoliol 14alpha-demethylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR70_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.970e-94
Identity = 139/228 (60.96%), Postives = 181/228 (79.39%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKKTA 681
            LQ+F+D+KYKDG   T+D+V G+LIALLFAGQHTSSI+STWT      +P +++RL EEQ  V+ D  + P+TWEHLG MEL+H+CMRE LRM+PPLI+L+R A++DF VTSKG  +TVPKG  V TSP VAMR+P VFK+PD FDPDR+ P R+EHK P+AYLGFGAGMHQCMGQQF F+QVKT++S+L+R ++ E++   +P  ++ +MVVGPKG   VRY ++ A
Sbjct:  259 LQIFMDLKYKDGGAPTNDEVTGMLIALLFAGQHTSSISSTWTLAFAMLNPDIMKRLEEEQAQVVGDA-DAPVTWEHLGNMELMHNCMREALRMFPPLIMLMRYARQDFAVTSKGTEYTVPKGSLVFTSPAVAMRIPEVFKDPDTFDPDRYAPPREEHKAPYAYLGFGAGMHQCMGQQFGFLQVKTLVSILLRNFEFELIEKKMPELNYESMVVGPKGNIMVRYKRRAA 485          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S2BVC5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVC5_9STRA)

HSP 1 Score: 282 bits (721), Expect = 3.630e-93
Identity = 137/226 (60.62%), Postives = 176/226 (77.88%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSK-GQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGDLPPPDFNAMVVGPKGKCTVRYTKK 675
            LQVF+DM+YK G  NTDDQ+ GLLIALLFAGQHTSS+TSTWT LL    P++++R++ E + V+       LT+EH+ ++EL+H+CM+E LRM+PPLI+L+R A KD  + SK G+ +TVPKG  V T+P VAMRLP VFK PD FDPDRF   R+EHK P+AYLGFG GMHQCMGQQF ++QVKTIL+ ++ +Y+IEM+G LP PD+ AMVVGPKGK   RY ++
Sbjct:   22 LQVFIDMEYKSGKKNTDDQITGLLIALLFAGQHTSSVTSTWTALLCCSRPEIMQRVINEVDDVVG---GETLTFEHVQKLELMHNCMKEALRMHPPLIMLMRKAMKDVPIESKDGRKWTVPKGDIVITAPSVAMRLPDVFKEPDLFDPDRFAAPREEHKTPYAYLGFGGGMHQCMGQQFGYLQVKTILATILSKYEIEMLGPLPEPDYTAMVVGPKGKPMCRYKRR 244          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S2UDY6_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDY6_9STRA)

HSP 1 Score: 288 bits (736), Expect = 3.880e-92
Identity = 140/226 (61.95%), Postives = 174/226 (76.99%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKK 675
            L +F+++KYKDG+  +D+QV GLLIALLFAGQHTS I+STWT+L    DP +++R++EEQE V+ D    PL ++ + EM+LLHDCMRE LR+ PPLILL+R A KD  V + G+ + +PKG  V  SP V MRLP+VF NPD FDPDRFGP R+EHKQP+AYLGFG GMH CMGQ FAF+QVKTILSVL REYKI  + D +P  D+ AMVVGPKG C +RY K+
Sbjct:  267 LSIFMEIKYKDGSLISDEQVTGLLIALLFAGQHTSCISSTWTSLFIASDPSIMKRIIEEQEQVMDDP-GAPLDFDKINEMQLLHDCMREALRLCPPLILLIRKAMKDVPVKAGGKQYVIPKGDMVFVSPSVGMRLPSVFPNPDTFDPDRFGPGREEHKQPYAYLGFGGGMHSCMGQNFAFIQVKTILSVLFREYKITPLFDKMPDIDYEAMVVGPKGDCRIRYQKR 491          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S2GTC1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GTC1_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.530e-88
Identity = 138/226 (61.06%), Postives = 166/226 (73.45%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQ-PFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGDLPPPDFNAMVVGPKGKCTVRYTKK 675
            L +F+D+KYKDGT  TD++V GLLIALLFAGQHTS ITSTWT+L     P +L+R+ +EQ  V     N  L +  +  M+LLHD M+E LR+ PPLILL+RMA KD TV +KG+S+ VPKG  V  SP V MRLP VF NPD FDPDRF PER E K  P+AY+GFG GMH CMGQ FAFVQVKTILS+L REY+IE + D+P  D+  MVVGPKG C V+Y K+
Sbjct:  262 LSIFMDIKYKDGTPITDEEVTGLLIALLFAGQHTSCITSTWTSLFIAHSPAILKRIQDEQAQVFSQDPNASLDFNKINNMQLLHDSMKEALRLCPPLILLIRMALKDLTVKAKGKSYVVPKGDLVFISPSVGMRLPEVFTNPDTFDPDRFSPERAEDKSSPYAYMGFGGGMHSCMGQNFAFVQVKTILSILFREYEIEPMADMPEIDYAQMVVGPKGDCRVKYKKR 487          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S1G287_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G287_9STRA)

HSP 1 Score: 275 bits (703), Expect = 3.750e-87
Identity = 135/226 (59.73%), Postives = 172/226 (76.11%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMV-GDLPPPDFNAMVVGPKGKCTVRYTKK 675
            L +F++ KY+DG   +DD++ GLLIALLFAGQHTS ITSTWT L   +D K+L++L EEQ  VL   +   L ++ + +ME +H+CMRETLR+ PPLILL+RMA KD  V++ G+ +TVPKG  V  SP  AMR+PTVF NPD+FDPDRFGP R+EHK P+AYLGFG GMH CMGQ FAF+QVK I+S+L R Y IE+V G +P  D+ AMVVGPKG CT+RY ++
Sbjct:  266 LSIFMESKYRDGRPFSDDEITGLLIALLFAGQHTSCITSTWTALHIAKDKKVLQKLHEEQGQVLAGKKK--LDYDVVNKMEFVHNCMRETLRLCPPLILLMRMALKDIPVSANGKKYTVPKGDIVMVSPAAAMRIPTVFPNPDDFDPDRFGPGREEHKVPYAYLGFGGGMHSCMGQNFAFLQVKIIMSILFRMYDIELVSGKMPDIDYEAMVVGPKGDCTIRYKRR 489          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A6U0S3F5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0S3F5_9STRA)

HSP 1 Score: 272 bits (696), Expect = 3.680e-86
Identity = 133/227 (58.59%), Postives = 172/227 (75.77%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQ-PFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKK 675
            L +F++ KYKDGT  TD++V GLLIALLFAGQHTS ITSTWT+L  + D ++L R++EEQ  + KD ++ PL  + + +MEL+H+ M+E LR+ PPLILL+R A KD  V + G+ FTVPKG  V  SP V MRLP VF +PD+FDPDR+GP R+EHK  P+AY GFG GMH CMGQ FA++QVKTILSVL R+Y+IEM+ D +P  ++ AMVVGP G C +RY K+
Sbjct:  262 LSMFMEAKYKDGTPITDEEVSGLLIALLFAGQHTSCITSTWTSLFVSHDKEILHRIIEEQNMIFKDKKDAPLDLDLINKMELMHNSMKEALRLCPPLILLIRKAMKDLNVKAGGKEFTVPKGDMVFMSPSVGMRLPEVFSDPDKFDPDRYGPGREEHKSSPYAYTGFGGGMHSCMGQNFAYMQVKTILSVLFRKYQIEMISDKIPEINYKAMVVGPMGDCRIRYKKR 488          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S2EDL1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDL1_TRICV)

HSP 1 Score: 272 bits (696), Expect = 5.090e-86
Identity = 132/227 (58.15%), Postives = 171/227 (75.33%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQ-PFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVG-DLPPPDFNAMVVGPKGKCTVRYTKK 675
            L +F+D+ YKDG   T+++V GLLIALLFAGQHTS ITSTWT+L    +P ++ R+LEEQ+ V  D  + P+ ++ + +MELLH+CM+E LR+ PPLILL+R A KD  V  KG+ +T+P+G  V  SP V MRLP VF +P+ FDPDRFGP R+EHK  P+AYLGFG GMH CMGQ FAF+QVK ILSV+ REY+IE++  +LP  D+ AMVVGPKG C VRY ++
Sbjct:  268 LSIFMDIVYKDGRKITNEEVTGLLIALLFAGQHTSHITSTWTSLFIATNPDVMRRVLEEQDAVFADDPDAPMDYDRVNQMELLHNCMKEALRLCPPLILLMRKAMKDVPVNIKGRKYTIPQGDIVMISPSVGMRLPEVFTDPETFDPDRFGPGREEHKSSPYAYLGFGGGMHSCMGQNFAFLQVKAILSVMFREYEIELIPKELPEIDYEAMVVGPKGDCRVRYKRR 494          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: B7GEJ8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEJ8_PHATC)

HSP 1 Score: 268 bits (684), Expect = 1.980e-84
Identity = 130/226 (57.52%), Postives = 169/226 (74.78%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKK 675
            L +F+D+KYKDG+  T DQV GLLIALLFAGQHTS ITSTWT+L    DP ++ R+L EQ+TVL    N P+ +E L  MELLH+CMRE LRM P  I++LR A++D  + S+G+S+ +P+G  V  SP V+MR+   F +PD +DPDRF   R+EHKQP+AY+GFG G+H CMGQ FAF+QVKTI+SVL+REY++E V   +P   ++ MVVGPKG CTVRY K+
Sbjct:  254 LSLFMDIKYKDGSAVTMDQVTGLLIALLFAGQHTSCITSTWTSLFIANDPTLVSRILAEQKTVLGGDLNKPIEYEDLQNMELLHNCMREALRMCPTFIMILRKAERDVKIQSEGKSYVIPQGDMVVVSPTVSMRMKETFADPDTYDPDRFAAPREEHKQPYAYMGFGGGLHSCMGQNFAFLQVKTIISVLLREYELERVEPGMPDIGYDDMVVGPKGDCTVRYRKR 479          
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S3P7D2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7D2_9STRA)

HSP 1 Score: 266 bits (680), Expect = 9.040e-84
Identity = 130/226 (57.52%), Postives = 166/226 (73.45%), Query Frame = 1
Query:    1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKK 675
            L +F+D+KYKDGT  T +QV GLLIALLFAGQHTS I+STWT++    D K ++R+LEEQ+ VLK      L +E L EME LH+CMRE LRM P  I++LR A+KD  +T +G+ F +P G FV  SP V+MRL T F  PD+FDPDRF   R+EHK+P++Y+GFG G+H CMGQ FAFVQVKTILS+L REY+IE +   +P  ++  MVVGPKG C +RY K+
Sbjct:  259 LSLFMDIKYKDGTPITMEQVTGLLIALLFAGQHTSCISSTWTSMFIQNDKKFVDRVLEEQKKVLKGDLKKTLEYEDLQEMEFLHNCMREALRMCPTFIMILRRAEKDIPITVEGKKFVIPNGDFVTVSPTVSMRLKTTFPEPDKFDPDRFAAPREEHKKPYSYMGFGGGLHSCMGQNFAFVQVKTILSILFREYEIERIEPGMPDINYEDMVVGPKGDCRIRYKKR 484          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQM6_ECTSI1.160e-15798.24Obtusifoliol 14alpha-Demethylase n=1 Tax=Ectocarpu... [more]
A0A835YR70_9STRA1.970e-9460.96Obtusifoliol 14alpha-demethylase n=1 Tax=Tribonema... [more]
A0A7S2BVC5_9STRA3.630e-9360.62Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UDY6_9STRA3.880e-9261.95Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S2GTC1_9STRA1.530e-8861.06Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1G287_9STRA3.750e-8759.73Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A6U0S3F5_9STRA3.680e-8658.59Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2EDL1_TRICV5.090e-8658.15Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B7GEJ8_PHATC1.980e-8457.52Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3P7D2_9STRA9.040e-8457.52Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16135contigEcto-sp13_S_contig16135:862..3941 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score444.9
Seed ortholog evalue2.2e-122
Seed eggNOG ortholog2880.D8LQM6
Preferred nameCYP51
Model size684
KEGG rclassRC01442
KEGG koko:K05917
KEGG ReactionR05640,R05731
KEGG Pathwayko00100,ko01100,ko01110,ko01130,map00100,map01100,map01110,map01130
KEGG ModuleM00101
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005886,GO:0006629,GO:0006694,GO:0008150,GO:0008152,GO:0008202,GO:0008398,GO:0008610,GO:0009058,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016491,GO:0016705,GO:0016709,GO:0032451,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0070988,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617
Exons5
EggNOG free text desc.sterol 14-demethylase activity
EggNOG OGsCOG2124@1,KOG0684@2759
EC1.14.13.70
Cds size666
COG Functional cat.C
BiGG ReactioniRC1080.CRv4_Au5_s2_g8646_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00199,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16135.4474.1prot_Ecto-sp13_S_contig16135.4474.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16135 862..3923 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462851.4764867-CDS-Ecto-sp13_S_contig16135:861..9991681462851.4764867-CDS-Ecto-sp13_S_contig16135:861..999Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16135 862..999 -
1681462851.4876606-CDS-Ecto-sp13_S_contig16135:1600..17141681462851.4876606-CDS-Ecto-sp13_S_contig16135:1600..1714Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16135 1601..1714 -
1681462851.5004098-CDS-Ecto-sp13_S_contig16135:2183..23241681462851.5004098-CDS-Ecto-sp13_S_contig16135:2183..2324Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16135 2184..2324 -
1681462851.5086145-CDS-Ecto-sp13_S_contig16135:2862..30101681462851.5086145-CDS-Ecto-sp13_S_contig16135:2862..3010Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16135 2863..3010 -
1681462851.5183275-CDS-Ecto-sp13_S_contig16135:3798..39231681462851.5183275-CDS-Ecto-sp13_S_contig16135:3798..3923Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16135 3799..3923 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462851.5287268-UTR-Ecto-sp13_S_contig16135:3923..39411681462851.5287268-UTR-Ecto-sp13_S_contig16135:3923..3941Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16135 3924..3941 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16135.4474.1

>prot_Ecto-sp13_S_contig16135.4474.1 ID=prot_Ecto-sp13_S_contig16135.4474.1|Name=mRNA_Ecto-sp13_S_contig16135.4474.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp
MKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERL
LEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKK
DFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQE
HKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGDLPPPD
FNAMVVGPKGKCTVRYTKKTA*
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mRNA from alignment at Ecto-sp13_S_contig16135:862..3941-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16135.4474.1 ID=mRNA_Ecto-sp13_S_contig16135.4474.1|Name=mRNA_Ecto-sp13_S_contig16135.4474.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3080bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16135:862..3941- (Ectocarpus species13 EcNAP12_S_4_19m)
TTGCAGGTGTTTGTGGACATGAAGTACAAGGACGGCACCACCAACACCGA CGACCAGGTGGTGGGCCTGCTCATCGCCCTCCTCTTCGCGGGACAGCACA CCTCTTCCATCACCTCCACCTGGACCACCCTCCTCACCACTCGGTAAGCA GCTTTCATGGACCTGTCTGTCCAGTGCAGGGTGAGGTGTTGGTCGTGCTG TGGTGTCTGTCATCCATGAGGCTTCCTCGGGACCCGAATGTAGGCGCCAT CATCTCTACGTGTACCTGACTTGACTGCTCTTCCCACAACCATGCAGGCT TCGTTCCGAGCGTAGCGTGTGTCTATCGTGTTGGTGTTTGATCTGTCGTT TTTGGGTACCGAGCTCGGCTTCCCGCCAAGCCTTGGACTCGAAACTAGGT TCTATAATAGCTCCCTCCTGGCTGTTGGGATGTTAGGATTTGACCCAGGC GTGGGAACACTCAGATCGTCAAGGTCAAGCTCTTGTGCTTCTGGCTTCTT GTACGAGTGCAGAACGACCATTAACGATCGCCGTCACTCTGATGATCAGA CTCGCTTGACGAGACTCGATTGGTGGTCCTTCTGGACAGGTCTTCTAGCT CTCTTGTACGGGAATCCAGTGGCAAGTGGGTCGATTTGGGGGTGTTTCAT GCGTATGGTCTCGTGGTGGTCGTTCGTTCCGGCCTTACCACTATGAAAAC CACTTCCACTACCGGTACACGTTCCATCAACGAATCGAAGATCGTCGGAG ATCCGCCCCACCCGCCATCGATGTCGCTCCCCCAGCCTCGGTGCAGCGAG AAGTATTGTATTGGCGTTATTGTCCGCACTGAGTGGTAGCAGTGCTGTGA ATGGTGAGTTGCAGCAGTTCGAGTGGAAGGCCAGCGAAACGTCGTCGAAT TTGTGCTTGTGTTTGTCGCCTTCTCTCGCAGGGACCCCAAGATGCTGGAG CGGCTTCTCGAGGAGCAGGAGACGGTGCTCAAAGACACCCAGAACACGCC TCTCACTTGGGAACACCTTGGCGAGATGGAGCTGCTGCACGACTGCATGC GCGAGACCCTCCGCATGTACCCGCCGCTGGTGAGTGTTATATTCCGTTAT AGTCGCTTTGCCAGTTCCTGCGGTTGTTTCGACCGCGATGTGGGTAGAAT GGTCATGCTGACCTGGTCAAACAGAATTACATTTAGTTATTTAGTTGTCT GCCACCGCATTGAATCGCAAGGGTGCATGCCTGTGGTATCATGACAGAAA AAATGCTAGTCTGATACACGATGTAGGATAGTTGTACGGAGTAATCCACT GAGCGTAGGTGCATCTCTGCGGCCGATCCAAAGTGCGCACCCTCTGTACC AACTGCTGACCGCTAAGTTCACATCTTGGATCCGAACTTCCTTCGTCCAG GTTTGAGTGCTATGTAGCATGCAGCGTGTAGCAGTTTCGACCTGAGCCTC AGAGCTATGCGTGCGAATACGTTTCAGAATACGACCAGTACCGATTGATC GAATTTTTTTGTGTTGACAAGGGGATGAGCTTGGCGTCAATCAACTCTCC CACCGCACCCTGCTTGTGCTTGTGGCAACCGCTATTGCATACTGGTATAT GTACTGCTGTATGATAGATCCTCCTGTTGCGCATGGCGAAGAAGGACTTC ACGGTGACCTCGAAGGGACAGAGCTTCACTGTTCCGAAGGGACACTTCGT TGGCACCTCCCCTCACGTGGCAATGCGCCTGCCTACCGTGTTCAAGAACC CCGACGAAGTGAGAAGGAAGACTATTTGGTATATACTTGCAGCAAGTAGT TACAACAACAAAGGCGCCATTTTATTTACCAAGACATTACGATGTGCGAC AATGCAATCTCCGATTACGCGGGACTAGGGCCGAAGTGGGAGGAGGTGTT TGAATTGCTCCGCGTCTTTTTTTACAATGTTGAGATTGATCGTAGGGCAC AAAACTGCTGGACATGTTTAACATGTGTAACGAGGAGCGAACCAAGATTT GACCAAAAGTATCCTAGCGAACAAGGTGCGGTAAGCTAAGCAATTATGTA GTGTGACCTCCGGAAGCGGCCGGTTTGCGCGAATGTGTTATATAATCATG TTTCACACGCTGGCTTGTTTGCTTGTTGTGCTAATCGTTTTCGTGTCGTG AATCCCACCGTCTCTTGTGACACCTGATCGTGTCGATGATGCCGTCGATG ATTGAATCCTGTGGATGATGGCGACAGTTCGACCCTGACCGGTTCGGTCC TGAGAGACAGGAGCACAAGCAGCCCTTCGCATACCTCGGCTTCGGCGCAG GAATGCACCAGTGCATGGGGCAGCAGTTCGCTTTCGTGCAGGTGTGTTGA ACGTTACCGTTAACGTCAATGTGTTGGTGTATTTTCCAGGAGACGGTCGG TATATGCACCATGGGAGGGGCTCTGGGGCCGATCGGTTGGATCATGGTTG TTGGCCACCTCGTTTTGGCGAACCAAAGTTTGTTCGTTGACGCGAGTGAA GTGTGACGCGTGGGCATTGCAGGTGGGGAAGCAGATCGCTGTTGGACTGT GCTGTTGAACGGCCCATGTCGTCAGGCTTTTGGTTGACATTCCACAAGAA AAAGCTAGATGCGTGTATTTTTTATCCCAGTAGATTGGTTCAGAGGAAGC CTATCTGTGGCCACGCGGGGGACAAGGCAGACCTACATACGTCGGCCATT TGGAGCAGTCCATGGAGGCATGTTTGCACGTTGACGCACATGGTACGTAT GAGTTGTTTGCTGGCGGTGTGGTTTACACGCGTGGCGGCAGTGCCCTCGC CATTGTTTCGTTCTTGGAGTCCTCTACTCCGGTGTCATGGCTACTCTTCA AACGTACAGTTGTCTTCTTTGTTTTATTGATGTGTTTCTCGGCTCAACAA ACGTCAGTCAGTCAAACTCTGTCTTTTGTTCGGTTCCCTCAGGTGAAGAC GATCTTGTCTGTGCTTGTGCGAGAGTACAAGATAGAGATGGTGGGAGACC TTCCCCCTCCCGATTTCAACGCGATGGTCGTGGGCCCCAAGGGCAAGTGC ACCGTGCGCTACACCAAGAAGACCGCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16135:862..3941-

>mRNA_Ecto-sp13_S_contig16135.4474.1 ID=mRNA_Ecto-sp13_S_contig16135.4474.1|Name=mRNA_Ecto-sp13_S_contig16135.4474.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16135:862..3941- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGTACAAGGACGGCACCACCAACACCGACGACCAGGTGGTGGGCCT
GCTCATCGCCCTCCTCTTCGCGGGACAGCACACCTCTTCCATCACCTCCA
CCTGGACCACCCTCCTCACCACTCGGGACCCCAAGATGCTGGAGCGGCTT
CTCGAGGAGCAGGAGACGGTGCTCAAAGACACCCAGAACACGCCTCTCAC
TTGGGAACACCTTGGCGAGATGGAGCTGCTGCACGACTGCATGCGCGAGA
CCCTCCGCATGTACCCGCCGCTGATCCTCCTGTTGCGCATGGCGAAGAAG
GACTTCACGGTGACCTCGAAGGGACAGAGCTTCACTGTTCCGAAGGGACA
CTTCGTTGGCACCTCCCCTCACGTGGCAATGCGCCTGCCTACCGTGTTCA
AGAACCCCGACGAATTCGACCCTGACCGGTTCGGTCCTGAGAGACAGGAG
CACAAGCAGCCCTTCGCATACCTCGGCTTCGGCGCAGGAATGCACCAGTG
CATGGGGCAGCAGTTCGCTTTCGTGCAGGTGAAGACGATCTTGTCTGTGC
TTGTGCGAGAGTACAAGATAGAGATGGTGGGAGACCTTCCCCCTCCCGAT
TTCAACGCGATGGTCGTGGGCCCCAAGGGCAAGTGCACCGTGCGCTACAC
CAAGAAGACCGCGTGA
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