mRNA_Ecto-sp13_S_contig16135.4474.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: D8LQM6_ECTSI (Obtusifoliol 14alpha-Demethylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQM6_ECTSI) HSP 1 Score: 454 bits (1169), Expect = 1.160e-157 Identity = 223/227 (98.24%), Postives = 226/227 (99.56%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGDLPPPDFNAMVVGPKGKCTVRYTKKTA 681
LQVFVDMKYKDG+TNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVL+REYKIEMVG+LPP DFNAMVVGPKGKCTVRYTKKTA
Sbjct: 264 LQVFVDMKYKDGSTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLLREYKIEMVGELPPADFNAMVVGPKGKCTVRYTKKTA 490
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A835YR70_9STRA (Obtusifoliol 14alpha-demethylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR70_9STRA) HSP 1 Score: 293 bits (751), Expect = 1.970e-94 Identity = 139/228 (60.96%), Postives = 181/228 (79.39%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKKTA 681
LQ+F+D+KYKDG T+D+V G+LIALLFAGQHTSSI+STWT +P +++RL EEQ V+ D + P+TWEHLG MEL+H+CMRE LRM+PPLI+L+R A++DF VTSKG +TVPKG V TSP VAMR+P VFK+PD FDPDR+ P R+EHK P+AYLGFGAGMHQCMGQQF F+QVKT++S+L+R ++ E++ +P ++ +MVVGPKG VRY ++ A
Sbjct: 259 LQIFMDLKYKDGGAPTNDEVTGMLIALLFAGQHTSSISSTWTLAFAMLNPDIMKRLEEEQAQVVGDA-DAPVTWEHLGNMELMHNCMREALRMFPPLIMLMRYARQDFAVTSKGTEYTVPKGSLVFTSPAVAMRIPEVFKDPDTFDPDRYAPPREEHKAPYAYLGFGAGMHQCMGQQFGFLQVKTLVSILLRNFEFELIEKKMPELNYESMVVGPKGNIMVRYKRRAA 485
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S2BVC5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVC5_9STRA) HSP 1 Score: 282 bits (721), Expect = 3.630e-93 Identity = 137/226 (60.62%), Postives = 176/226 (77.88%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSK-GQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGDLPPPDFNAMVVGPKGKCTVRYTKK 675
LQVF+DM+YK G NTDDQ+ GLLIALLFAGQHTSS+TSTWT LL P++++R++ E + V+ LT+EH+ ++EL+H+CM+E LRM+PPLI+L+R A KD + SK G+ +TVPKG V T+P VAMRLP VFK PD FDPDRF R+EHK P+AYLGFG GMHQCMGQQF ++QVKTIL+ ++ +Y+IEM+G LP PD+ AMVVGPKGK RY ++
Sbjct: 22 LQVFIDMEYKSGKKNTDDQITGLLIALLFAGQHTSSVTSTWTALLCCSRPEIMQRVINEVDDVVG---GETLTFEHVQKLELMHNCMKEALRMHPPLIMLMRKAMKDVPIESKDGRKWTVPKGDIVITAPSVAMRLPDVFKEPDLFDPDRFAAPREEHKTPYAYLGFGGGMHQCMGQQFGYLQVKTILATILSKYEIEMLGPLPEPDYTAMVVGPKGKPMCRYKRR 244
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S2UDY6_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDY6_9STRA) HSP 1 Score: 288 bits (736), Expect = 3.880e-92 Identity = 140/226 (61.95%), Postives = 174/226 (76.99%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKK 675
L +F+++KYKDG+ +D+QV GLLIALLFAGQHTS I+STWT+L DP +++R++EEQE V+ D PL ++ + EM+LLHDCMRE LR+ PPLILL+R A KD V + G+ + +PKG V SP V MRLP+VF NPD FDPDRFGP R+EHKQP+AYLGFG GMH CMGQ FAF+QVKTILSVL REYKI + D +P D+ AMVVGPKG C +RY K+
Sbjct: 267 LSIFMEIKYKDGSLISDEQVTGLLIALLFAGQHTSCISSTWTSLFIASDPSIMKRIIEEQEQVMDDP-GAPLDFDKINEMQLLHDCMREALRLCPPLILLIRKAMKDVPVKAGGKQYVIPKGDMVFVSPSVGMRLPSVFPNPDTFDPDRFGPGREEHKQPYAYLGFGGGMHSCMGQNFAFIQVKTILSVLFREYKITPLFDKMPDIDYEAMVVGPKGDCRIRYQKR 491
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S2GTC1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GTC1_9STRA) HSP 1 Score: 278 bits (712), Expect = 1.530e-88 Identity = 138/226 (61.06%), Postives = 166/226 (73.45%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQ-PFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGDLPPPDFNAMVVGPKGKCTVRYTKK 675
L +F+D+KYKDGT TD++V GLLIALLFAGQHTS ITSTWT+L P +L+R+ +EQ V N L + + M+LLHD M+E LR+ PPLILL+RMA KD TV +KG+S+ VPKG V SP V MRLP VF NPD FDPDRF PER E K P+AY+GFG GMH CMGQ FAFVQVKTILS+L REY+IE + D+P D+ MVVGPKG C V+Y K+
Sbjct: 262 LSIFMDIKYKDGTPITDEEVTGLLIALLFAGQHTSCITSTWTSLFIAHSPAILKRIQDEQAQVFSQDPNASLDFNKINNMQLLHDSMKEALRLCPPLILLIRMALKDLTVKAKGKSYVVPKGDLVFISPSVGMRLPEVFTNPDTFDPDRFSPERAEDKSSPYAYMGFGGGMHSCMGQNFAFVQVKTILSILFREYEIEPMADMPEIDYAQMVVGPKGDCRVKYKKR 487
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S1G287_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G287_9STRA) HSP 1 Score: 275 bits (703), Expect = 3.750e-87 Identity = 135/226 (59.73%), Postives = 172/226 (76.11%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMV-GDLPPPDFNAMVVGPKGKCTVRYTKK 675
L +F++ KY+DG +DD++ GLLIALLFAGQHTS ITSTWT L +D K+L++L EEQ VL + L ++ + +ME +H+CMRETLR+ PPLILL+RMA KD V++ G+ +TVPKG V SP AMR+PTVF NPD+FDPDRFGP R+EHK P+AYLGFG GMH CMGQ FAF+QVK I+S+L R Y IE+V G +P D+ AMVVGPKG CT+RY ++
Sbjct: 266 LSIFMESKYRDGRPFSDDEITGLLIALLFAGQHTSCITSTWTALHIAKDKKVLQKLHEEQGQVLAGKKK--LDYDVVNKMEFVHNCMRETLRLCPPLILLMRMALKDIPVSANGKKYTVPKGDIVMVSPAAAMRIPTVFPNPDDFDPDRFGPGREEHKVPYAYLGFGGGMHSCMGQNFAFLQVKIIMSILFRMYDIELVSGKMPDIDYEAMVVGPKGDCTIRYKRR 489
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A6U0S3F5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0S3F5_9STRA) HSP 1 Score: 272 bits (696), Expect = 3.680e-86 Identity = 133/227 (58.59%), Postives = 172/227 (75.77%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQ-PFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKK 675
L +F++ KYKDGT TD++V GLLIALLFAGQHTS ITSTWT+L + D ++L R++EEQ + KD ++ PL + + +MEL+H+ M+E LR+ PPLILL+R A KD V + G+ FTVPKG V SP V MRLP VF +PD+FDPDR+GP R+EHK P+AY GFG GMH CMGQ FA++QVKTILSVL R+Y+IEM+ D +P ++ AMVVGP G C +RY K+
Sbjct: 262 LSMFMEAKYKDGTPITDEEVSGLLIALLFAGQHTSCITSTWTSLFVSHDKEILHRIIEEQNMIFKDKKDAPLDLDLINKMELMHNSMKEALRLCPPLILLIRKAMKDLNVKAGGKEFTVPKGDMVFMSPSVGMRLPEVFSDPDKFDPDRYGPGREEHKSSPYAYTGFGGGMHSCMGQNFAYMQVKTILSVLFRKYQIEMISDKIPEINYKAMVVGPMGDCRIRYKKR 488
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S2EDL1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDL1_TRICV) HSP 1 Score: 272 bits (696), Expect = 5.090e-86 Identity = 132/227 (58.15%), Postives = 171/227 (75.33%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQ-PFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVG-DLPPPDFNAMVVGPKGKCTVRYTKK 675
L +F+D+ YKDG T+++V GLLIALLFAGQHTS ITSTWT+L +P ++ R+LEEQ+ V D + P+ ++ + +MELLH+CM+E LR+ PPLILL+R A KD V KG+ +T+P+G V SP V MRLP VF +P+ FDPDRFGP R+EHK P+AYLGFG GMH CMGQ FAF+QVK ILSV+ REY+IE++ +LP D+ AMVVGPKG C VRY ++
Sbjct: 268 LSIFMDIVYKDGRKITNEEVTGLLIALLFAGQHTSHITSTWTSLFIATNPDVMRRVLEEQDAVFADDPDAPMDYDRVNQMELLHNCMKEALRLCPPLILLMRKAMKDVPVNIKGRKYTIPQGDIVMISPSVGMRLPEVFTDPETFDPDRFGPGREEHKSSPYAYLGFGGGMHSCMGQNFAFLQVKAILSVMFREYEIELIPKELPEIDYEAMVVGPKGDCRVRYKRR 494
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: B7GEJ8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEJ8_PHATC) HSP 1 Score: 268 bits (684), Expect = 1.980e-84 Identity = 130/226 (57.52%), Postives = 169/226 (74.78%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKK 675
L +F+D+KYKDG+ T DQV GLLIALLFAGQHTS ITSTWT+L DP ++ R+L EQ+TVL N P+ +E L MELLH+CMRE LRM P I++LR A++D + S+G+S+ +P+G V SP V+MR+ F +PD +DPDRF R+EHKQP+AY+GFG G+H CMGQ FAF+QVKTI+SVL+REY++E V +P ++ MVVGPKG CTVRY K+
Sbjct: 254 LSLFMDIKYKDGSAVTMDQVTGLLIALLFAGQHTSCITSTWTSLFIANDPTLVSRILAEQKTVLGGDLNKPIEYEDLQNMELLHNCMREALRMCPTFIMILRKAERDVKIQSEGKSYVIPQGDMVVVSPTVSMRMKETFADPDTYDPDRFAAPREEHKQPYAYMGFGGGLHSCMGQNFAFLQVKTIISVLLREYELERVEPGMPDIGYDDMVVGPKGDCTVRYRKR 479
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Match: A0A7S3P7D2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7D2_9STRA) HSP 1 Score: 266 bits (680), Expect = 9.040e-84 Identity = 130/226 (57.52%), Postives = 166/226 (73.45%), Query Frame = 1
Query: 1 LQVFVDMKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLLEEQETVLKDTQNTPLTWEHLGEMELLHDCMRETLRMYPPLILLLRMAKKDFTVTSKGQSFTVPKGHFVGTSPHVAMRLPTVFKNPDEFDPDRFGPERQEHKQPFAYLGFGAGMHQCMGQQFAFVQVKTILSVLVREYKIEMVGD-LPPPDFNAMVVGPKGKCTVRYTKK 675
L +F+D+KYKDGT T +QV GLLIALLFAGQHTS I+STWT++ D K ++R+LEEQ+ VLK L +E L EME LH+CMRE LRM P I++LR A+KD +T +G+ F +P G FV SP V+MRL T F PD+FDPDRF R+EHK+P++Y+GFG G+H CMGQ FAFVQVKTILS+L REY+IE + +P ++ MVVGPKG C +RY K+
Sbjct: 259 LSLFMDIKYKDGTPITMEQVTGLLIALLFAGQHTSCISSTWTSMFIQNDKKFVDRVLEEQKKVLKGDLKKTLEYEDLQEMEFLHNCMREALRMCPTFIMILRRAEKDIPITVEGKKFVIPNGDFVTVSPTVSMRLKTTFPEPDKFDPDRFAAPREEHKKPYSYMGFGGGLHSCMGQNFAFVQVKTILSILFREYEIERIEPGMPDINYEDMVVGPKGDCRIRYKKR 484 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16135.4474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16135.4474.1 >prot_Ecto-sp13_S_contig16135.4474.1 ID=prot_Ecto-sp13_S_contig16135.4474.1|Name=mRNA_Ecto-sp13_S_contig16135.4474.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp MKYKDGTTNTDDQVVGLLIALLFAGQHTSSITSTWTTLLTTRDPKMLERLback to top mRNA from alignment at Ecto-sp13_S_contig16135:862..3941- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16135.4474.1 ID=mRNA_Ecto-sp13_S_contig16135.4474.1|Name=mRNA_Ecto-sp13_S_contig16135.4474.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3080bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16135:862..3941- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16135:862..3941- >mRNA_Ecto-sp13_S_contig16135.4474.1 ID=mRNA_Ecto-sp13_S_contig16135.4474.1|Name=mRNA_Ecto-sp13_S_contig16135.4474.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16135:862..3941- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |