prot_Ecto-sp13_S_contig1612.4472.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1612.4472.1
Unique Name	prot_Ecto-sp13_S_contig1612.4472.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	183

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1612.4472.1 vs. uniprot
Match: A0A6H5L721_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L721_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 5.530e-116
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0

Query:    1 PVLFVTGAGLTPAQASSRNMETHASLLKWVQVMATPGASPVTSTRELESKCLKKERCALVMKAGPLEKQDDVKDAFKDLMGNHRNLKFVSIDSTKLETSLEKKLGIKPVDGSHQLVHFTRYNVTGKVKVGTPRWGVQVYSGALETASMSVFIEGAAIAGTKEKTALTRLPTVMTRKEPKAKP 182
            PVLFVTGAGLTPAQASSRNMETHASLLKWVQVMATPGASPVTSTRELESKCLKKERCALVMKAGPLE  DDVKDAFKDLMGNHRNLKFVSIDSTKLETSLEKKLGIKPVDGSHQLVHFTRYNVTGKVKVGTPRWGVQVYSGALETASMSVFIEGAAIAGTKEKTALTRLPTVMTRKEPKAKP
Sbjct:  126 PVLFVTGAGLTPAQASSRNMETHASLLKWVQVMATPGASPVTSTRELESKCLKKERCALVMKAGPLE--DDVKDAFKDLMGNHRNLKFVSIDSTKLETSLEKKLGIKPVDGSHQLVHFTRYNVTGKVKVGTPRWGVQVYSGALETASMSVFIEGAAIAGTKEKTALTRLPTVMTRKEPKAKP 305

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1612.4472.1 vs. uniprot
Match: D8LFH7_ECTSI (NIMA-like PK similar to Serine/threonine-protein kinase Nek1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH7_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 2.080e-59
Identity = 106/183 (57.92%), Postives = 128/183 (69.95%), Query Frame = 0

Query:    1 PVLFVTGAGLTPAQASSRNMETHASLLKWVQVMATPGASPVTSTRELESKCLKKERCALVMKAGPLEKQDDVKDAFKDLMGNHRNLKFVSIDSTKLETSLEKKLGIKPVDGSHQLVHFTRYNVTGKVKVGTPRWGVQVYSGALETASMSVFIEGAAIAGTKEKTALTRLPTVMTRKEPKAKPP 183
            P+LFV GA + P QAS  NM++ ASL+KW  +  TP ASPVTSTR LE+KC+KKE+C L+M AG LE  DD   A K++M  HR ++FVS+D+TKLETS+EK+  IKPVDG+H  VHFTRYNV    K GTPRWGVQVY G L+T SMS F+      G +EK  L   PTV TRK  K K P
Sbjct:  422 PILFVAGAEMKPVQASPWNMDSEASLVKWASIAITPAASPVTSTRSLETKCMKKEQCVLIMLAGQLESADDY--ALKEVMARHRKVRFVSMDATKLETSIEKRFDIKPVDGAHHFVHFTRYNVPVNAKAGTPRWGVQVYRGKLDTDSMSAFL-----GGNEEKQGLRHAPTVSTRKATKKKRP 597

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1612.4472.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1612.4472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L721_9PHAE	5.530e-116	98.90	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LFH7_ECTSI	2.080e-59	57.92	NIMA-like PK similar to Serine/threonine-protein k...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..10
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 11..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 16..183
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..15

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1612	contig	Ecto-sp13_S_contig1612:14764..15970 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1612.4472.1	mRNA_Ecto-sp13_S_contig1612.4472.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1612 14764..15970 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1612.4472.1 ID=prot_Ecto-sp13_S_contig1612.4472.1|Name=mRNA_Ecto-sp13_S_contig1612.4472.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
PVLFVTGAGLTPAQASSRNMETHASLLKWVQVMATPGASPVTSTRELESK
CLKKERCALVMKAGPLEKQDDVKDAFKDLMGNHRNLKFVSIDSTKLETSL
EKKLGIKPVDGSHQLVHFTRYNVTGKVKVGTPRWGVQVYSGALETASMSV
FIEGAAIAGTKEKTALTRLPTVMTRKEPKAKPP