prot_Ecto-sp13_S_contig16118.4469.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16118.4469.1
Unique Nameprot_Ecto-sp13_S_contig16118.4469.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: D7FIT4_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT4_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 5.550e-31
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD
Sbjct:  235 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 292          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: F0XZM0_AURAN (Tub domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZM0_AURAN)

HSP 1 Score: 98.2 bits (243), Expect = 1.030e-23
Identity = 46/58 (79.31%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQLV  +D D I+LQFGRV ++EFTMDFQ+P++PFQAFAITLSSFDSKIACD
Sbjct:  199 MASVKNFQLVQPDDQDAILLQFGRVGKDEFTMDFQWPMTPFQAFAITLSSFDSKIACD 256          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: A0A835YWG7_9STRA (Tub domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.150e-23
Identity = 45/58 (77.59%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQLV+ +D + ++LQFGRVA++EFTMDFQ+PI+P QAFAITLSSFDSKIACD
Sbjct:  205 MASVKNFQLVTPDDHETVVLQFGRVAKDEFTMDFQWPITPLQAFAITLSSFDSKIACD 262          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: A0A7S2VW98_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VW98_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.020e-23
Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQLV   D D IILQFGRVA++EFT DFQ+PISPFQAFAITLSSFDSKIACD
Sbjct:  341 MASVKNFQLVDQLDHDNIILQFGRVAKDEFTCDFQWPISPFQAFAITLSSFDSKIACD 398          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: A0A812VY07_SYMMI (TULP11 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VY07_SYMMI)

HSP 1 Score: 92.8 bits (229), Expect = 2.470e-23
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQLV  ++ + +ILQFGRV +++FTMD Q+P+SPFQAFAITLSSFDSKIACD
Sbjct:   36 MASVKNFQLVDPDEQNAVILQFGRVGKDQFTMDMQWPMSPFQAFAITLSSFDSKIACD 93          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: A0A7S2SNS1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNS1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.600e-23
Identity = 45/58 (77.59%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQL++ ED +R++LQFGRVA++EFTMDFQ+P +PFQAFA+TLSSFDSKIACD
Sbjct:  716 MASVKNFQLITHEDQERVLLQFGRVAKDEFTMDFQWPFTPFQAFAVTLSSFDSKIACD 773          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: A0A6H5JKE0_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKE0_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 4.570e-23
Identity = 51/58 (87.93%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQLVSTEDFDRIILQFGRVAREEFTMD       FQAFAITLSSFDSKIACD
Sbjct:  178 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMD-------FQAFAITLSSFDSKIACD 228          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: A0A7S3Y0Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Z9_HETAK)

HSP 1 Score: 94.4 bits (233), Expect = 3.130e-22
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQL+  E  + ++LQFGRVA+++FTMDFQ+P+SPFQAFAITLSSFDSKIACD
Sbjct:  199 MASVKNFQLIEGERPEDVLLQFGRVAKDKFTMDFQWPLSPFQAFAITLSSFDSKIACD 256          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: A0A812T167_SYMMI (Tulp1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T167_SYMMI)

HSP 1 Score: 94.0 bits (232), Expect = 3.710e-22
Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQLV  E+ + +ILQFGRV +++FTMD Q+P+SPFQAFAITLSSFDSKIACD
Sbjct:  190 MASVKNFQLVDPEEQNAVILQFGRVGKDQFTMDMQWPMSPFQAFAITLSSFDSKIACD 247          
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Match: A0A7S3ZVG1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVG1_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.340e-22
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSSFDSKIACD 58
            MASVKNFQLV  ++ D ++LQFGRV ++EFTMDF+YP++PFQAFAITLSSFDSKIACD
Sbjct:  636 MASVKNFQLVEPDEQDAVLLQFGRVGKDEFTMDFRYPLTPFQAFAITLSSFDSKIACD 693          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16118.4469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIT4_ECTSI5.550e-31100.00Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
F0XZM0_AURAN1.030e-2379.31Tub domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A835YWG7_9STRA1.150e-2377.59Tub domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2VW98_9STRA2.020e-2384.48Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A812VY07_SYMMI2.470e-2374.14TULP11 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A7S2SNS1_9STRA3.600e-2377.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5JKE0_9PHAE4.570e-2387.93Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3Y0Z9_HETAK3.130e-2275.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812T167_SYMMI3.710e-2275.86Tulp1 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S3ZVG1_9STRA4.340e-2275.86Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPRINTSPR01573SUPERTUBBYcoord: 15..34
score: 56.59
coord: 36..58
score: 68.38
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 1..53
e-value: 5.1E-27
score: 95.2
IPR025659Tubby-like, C-terminalGENE3D3.20.90.10coord: 1..58
e-value: 1.1E-29
score: 105.4
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 1..58
NoneNo IPR availablePANTHERPTHR16517:SF7PROTEIN KING TUBBYcoord: 1..57
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16118contigEcto-sp13_S_contig16118:2413..2909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16118.4469.1mRNA_Ecto-sp13_S_contig16118.4469.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16118 2324..2935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16118.4469.1 ID=prot_Ecto-sp13_S_contig16118.4469.1|Name=mRNA_Ecto-sp13_S_contig16118.4469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
MASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQYPISPFQAFAITLSS
FDSKIACD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000007Tubby_C
IPR025659Tubby-like_C