prot_Ecto-sp13_S_contig16107.4462.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16107.4462.1
Unique Nameprot_Ecto-sp13_S_contig16107.4462.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length473
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16107.4462.1 vs. uniprot
Match: D7FNG0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG0_ECTSI)

HSP 1 Score: 749 bits (1934), Expect = 1.030e-265
Identity = 413/475 (86.95%), Postives = 422/475 (88.84%), Query Frame = 0 
Query:    1 VLLPNSIRRVQHPFSGKGKPKNVTVNFISRKGAMQLSWGGKSGVPLETIFGVTKGINTDALKSVVSPDRAENCFSLHTQDRTIDFEVDNPWLVLLVVRALRLFLGAHYDTLPAPTFFSHLCLRPRGNTAAAGGAAGSSRADSPKQSLVWTSADKESPVSPLPKEQTTRSTPTERASRDSCSDEGDDRDGGGQRPPLPWEGXXXXXXXXEFDSAAGSTMFEAVPMEEGMVYPPAPDGHAPGAGSAARXXXXXXXXXXXXXXXXXMFVTDVADEEDDGDGSGDRSPGGIMALFSSGGRRSAEESSVGSAAGSIPRSRSGVEGCGVVDSSTGGTTPRGREAEAGGGPSGGAS--EGGGQLTASQVLATRGMTKRLNLSKKLAANNTGPLKGRRFDLMALPMDPGQQDRRDRGMSEHAETTMKRSQGMSISIGAGYTLPEEKNRSRGLDGEGADEGTPSMLGLDSGRTAVVDDLNDKLQ 473
            +++   I  ++HPFSGKGKPKNVTVNF+SRKGAMQLSWGGKSGVPLETIFGVTKGINTDALKSVVSPDRAENCFSLHTQDRTIDFEVDNPWLVLLVVRALRLFLGAHYDTLPAPTFFSHLCLRPRG  A A     +SR DSPKQSLVWTSADKE PVSPLPKEQTTRSTPTERASRDS SDEGDDRDG GQRPPLPWEGXXXXXX  E DSAAGSTMFEAVPM EGMVYPPAPDGHAPGAGSAAR                 M VTD ADEEDDG GS DRSPGGIMALFSSGGRRSAEESSVGSAAGSIPRSRSGVEG G VDSSTGGTTPRGREAEAG  PS G    EG GQLTASQVLATRGMTKRLNLSKKLAANNTGPLKGRRFDLMALPMDPGQQDRRDRGMSEHAETT KRSQGMSISIGAGYTLPEEKNRS+GL+GEGADEGTPSMLGLDSGRTAVVDDLNDKLQ
Sbjct:  234 LIMERGIEVIKHPFSGKGKPKNVTVNFVSRKGAMQLSWGGKSGVPLETIFGVTKGINTDALKSVVSPDRAENCFSLHTQDRTIDFEVDNPWLVLLVVRALRLFLGAHYDTLPAPTFFSHLCLRPRGAAAGA-----NSRTDSPKQSLVWTSADKEPPVSPLPKEQTTRSTPTERASRDSASDEGDDRDGDGQRPPLPWEGXXXXXX--ELDSAAGSTMFEAVPMGEGMVYPPAPDGHAPGAGSAARAPRPPRVVAAGEDGEEGMPVTDFADEEDDGHGSADRSPGGIMALFSSGGRRSAEESSVGSAAGSIPRSRSGVEGGGGVDSSTGGTTPRGREAEAGXXPSAGXXXXEGAGQLTASQVLATRGMTKRLNLSKKLAANNTGPLKGRRFDLMALPMDPGQQDRRDRGMSEHAETTTKRSQGMSISIGAGYTLPEEKNRSKGLNGEGADEGTPSMLGLDSGRTAVVDDLNDKLQ 701
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BLAST of mRNA_Ecto-sp13_S_contig16107.4462.1 vs. uniprot
Match: A0A836CIS7_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.130e-26
Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 0 
Query:    1 VLLPNSIRRVQHPFSGKGKPKNVTVNFISRKGAMQLSWGGKSGVPLETIFGVTKGINTDALKSVV----------SPDRAENCFSLHTQDRTIDFEVD---------NPWLVLLVVRALRLFLGAHYDTLPAPTFFSHLCLRPRG 126
            V++   I   +HPF  + +PK V +    R+G MQL+WGG+S + L  ++GV KG+ T A++  V          +  RA  CFSL T  RT+DFEV          NPWL LLVVRA+RLFLGAH+D++P   F S + L PRG
Sbjct:  440 VIMERGIAMTKHPFGSRARPKAVALRIRQRRGVMQLTWGGRSALALSAVYGVVKGVETTAMRRSVLRTCGGDGAAAARRAPGCFSLLTPKRTLDFEVGPTLLDFQVANPWLALLVVRAMRLFLGAHFDSIPPAQFCSPVRLIPRG 584
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16107.4462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNG0_ECTSI1.030e-26586.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CIS7_9STRA6.130e-2643.45Methyltransf_11 domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16107contigEcto-sp13_S_contig16107:1443..3569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16107.4462.1mRNA_Ecto-sp13_S_contig16107.4462.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16107 1443..3569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16107.4462.1 ID=prot_Ecto-sp13_S_contig16107.4462.1|Name=mRNA_Ecto-sp13_S_contig16107.4462.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=473bp
VLLPNSIRRVQHPFSGKGKPKNVTVNFISRKGAMQLSWGGKSGVPLETIF
GVTKGINTDALKSVVSPDRAENCFSLHTQDRTIDFEVDNPWLVLLVVRAL
RLFLGAHYDTLPAPTFFSHLCLRPRGNTAAAGGAAGSSRADSPKQSLVWT
SADKESPVSPLPKEQTTRSTPTERASRDSCSDEGDDRDGGGQRPPLPWEG
GGGGGGGGEFDSAAGSTMFEAVPMEEGMVYPPAPDGHAPGAGSAARAPRP
PRAVAAGEDGEEGMFVTDVADEEDDGDGSGDRSPGGIMALFSSGGRRSAE
ESSVGSAAGSIPRSRSGVEGCGVVDSSTGGTTPRGREAEAGGGPSGGASE
GGGQLTASQVLATRGMTKRLNLSKKLAANNTGPLKGRRFDLMALPMDPGQ
QDRRDRGMSEHAETTMKRSQGMSISIGAGYTLPEEKNRSRGLDGEGADEG
TPSMLGLDSGRTAVVDDLNDKLQ
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