mRNA_Ecto-sp13_S_contig1610.4458.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: D8LU31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU31_ECTSI) HSP 1 Score: 875 bits (2262), Expect = 3.580e-308 Identity = 497/531 (93.60%), Postives = 504/531 (94.92%), Query Frame = 1
Query: 1222 MARPSLLIVLLAVSCHRTSGFALRGPVHARRCRTSAPFARRTLCATPRPRAAPTSTRRLIAKRRLTSVPAGLSAAEATDVPQAPTPATASSSSGPSFLATGTSFTAIVVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEGIVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSVNALKLLLLVCGGWFVSLSSTAAVVGALSTPADASTTDSAAPPKTLAPVFRGSFVRDLGAGAVVSGVLAVAGGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLLGLPTTLRLAALSRNITSPLAMAICSLVGADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLVXXXXXXXXXXXLALGAAAGVPAAP 2814
MARPSLLIVLLAVSCHRTSGFALRGPVHARRC TSAPFARRTLCATPRPRAAPTSTRRLIAK RL+SVP LSAAEATDVPQAPTPATASSSSGPS LATGTSFTAIVVADF LRRAFVRAGIAFPPSLAGMV LFAGLVVLERAAPKSAE IVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSVNALKLLLLVCGGWFVSLSSTAAVVGALS PADASTTDSAAPPKTLAPVFRG FVR LGAGAVVSGVLAVAGGSGQAPG LL KLSKPAAQLSLLLATL GF+AGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADML SYLTRSRCPVHLGAGD+LLGLLGPSVLSFAVQMYRRR++IFEDAKQVAAGSVFCA+SGLFGTALVSRLLGLPTTLRLAALSRNITSPLAMAICSL+GADPSLAIAIVVLTGVIGANFGATALDALGVKDPA RGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLV LALGAAAGVPAAP
Sbjct: 1 MARPSLLIVLLAVSCHRTSGFALRGPVHARRCLTSAPFARRTLCATPRPRAAPTSTRRLIAKHRLSSVPVELSAAEATDVPQAPTPATASSSSGPSLLATGTSFTAIVVADFVLRRAFVRAGIAFPPSLAGMVVLFAGLVVLERAAPKSAEDIVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSVNALKLLLLVCGGWFVSLSSTAAVVGALSPPADASTTDSAAPPKTLAPVFRGPFVRGLGAGAVVSGVLAVAGGSGQAPGALLTKLSKPAAQLSLLLATLFGFSAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLRSYLTRSRCPVHLGAGDVLLGLLGPSVLSFAVQMYRRRNLIFEDAKQVAAGSVFCASSGLFGTALVSRLLGLPTTLRLAALSRNITSPLAMAICSLIGADPSLAIAIVVLTGVIGANFGATALDALGVKDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLVSIPSVRTALVRLALGAAAGVPAAP 531
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: A0A7S3VAA5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAA5_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.330e-77 Identity = 199/452 (44.03%), Postives = 260/452 (57.52%), Query Frame = 1
Query: 1489 SSSSGPSFLATGTSFTAIVVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEGIVSSLEPGAALLARWLPVFFAPSLVVLPLSPP-PSSVNALKLLLLVCGGWFVSLSSTA-------AVVGALSTPADASTT---------DSAAPPKTLAPVFRGSFVRDLGAGAVVSGVLAVAGGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRL--LGLPTTLRLAALSRNITSPLAMAICSLVGADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLVXXXXXXXXXXXLALG 2787
S+ GPS +A+ +S A+V D RR I+FP SLAG LF LV L +G+ + L PGAA+LA+WLPVFF PSLV LPL+ SS+ K+ +V G+F +L STA ++G S+ ADA + +S PPK P +F R L A A S + + A L+ P L++L TL+ F G R+P+ +K VHP+V C+ + G F ML SY S CPVHLGAGDLLL +LGP+V++ A QMY R+ ++ E+ +V + GLFGTA ++RL +G P LRL LSRNITSPLAMAI ++GAD SLA+++VV+TG+IGANFGA LDA+GVKD RGL G +AHGLGTAA NE AF F+A+SMALTA+A TVLV +ALG
Sbjct: 87 SAKKGPSLIASISSTVALVALDIGFRRLLKSLSISFPSSLAGCGTLFTLLVTLCTVNESLGDGLYNLLSPGAAVLAKWLPVFFVPSLVTLPLAQSLGSSLEVFKVGAVVVAGFFFTLFSTAFSVIGIRKILGTASSSADAQSLPVVQSTNVEESTPPPK---PFSDATFNR-LVACATTSAIATIVAIKSSASIHLIT----PMTALTMLCTTLASFTFGARLPKSFTKTVHPLVTCTTLTWTAMKVFALSTGQSFRSMLTSYKVGSTCPVHLGAGDLLLFMLGPAVVALACQMYDRKKLMKENIAEVGTAVGVSSIGGLFGTAAMARLFNVGNPM-LRLCLLSRNITSPLAMAIAGILGADVSLAVSMVVVTGLIGANFGAAILDAVGVKDAVARGLGIGAAAHGLGTAAFANEKDAFPFAAISMALTASACTVLVSIPTVKKMVLKVALG 529
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: A0A7S1FQA4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQA4_9STRA) HSP 1 Score: 258 bits (660), Expect = 9.900e-72 Identity = 191/441 (43.31%), Postives = 256/441 (58.05%), Query Frame = 1
Query: 1537 AIVVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEGIVSS------------------LEPGAALLARWLPVFFAPSLVVLPLSPP-PSSVNALKLLLLVCGGWFVSLSSTAAVVGALSTPADASTTDSAAPP-KTLAPVFRGSFVRDLGAGAVVSGVLAVAGGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLL---GLPTTLRLAALSRNITSPLAMAICSLVGADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLVXXXXXXXXXXXLALGA 2790
A+ D LRR F GIAFP SLAG L L+ + +P +V L+PGA LLARWLP+FF PSLV LPL+ P ++ A K+ ++V GG+ SL +T+ V A+ +A+PP K+ F L G +V + A+ G + G + A L PA + LL TL+ F G R+P +++KA+HP+V+C+ ++ AA+GK G F L Y T S G GDLLL LLGP+V+S A+QMY RR ++ ++A++VAAG A GLFGTA + RLL G P +RLA LSRNITSPLAMAI ++GAD +A++ VV++G++GANFGA+ LD G+KDP RGL G +AHGLGTAA E AF F+A++MALTA+ STVLV LALGA
Sbjct: 84 ALTAFDVLLRRTFRSLGIAFPSSLAGCGFLLFALLAGDLFSPDPGYEMVGGKPVPIGERGRWGNKVYRLLDPGAVLLARWLPIFFVPSLVTLPLAEPLGGALEAAKVGIVVAGGFLFSLLTTSWCVAAVRPKGQ----KTASPPSKSAGXXXXXPFSAGL-LGLLVR-LTALGGAADLLAGVVNAGLRAPARYVYLLCGTLASFVYGARLPPKITKALHPLVVCTLLSWTGVAALGKLTGSSFRATLAGYRTGSWTT---GPGDLLLFLLGPAVISLALQMYGRRELVRQNAREVAAGVTGSAAGGLFGTAFLVRLLRMTGAPG-VRLALLSRNITSPLAMAIAGMLGADVGMAVSFVVVSGLLGANFGASILDRCGIKDPVARGLGIGAAAHGLGTAAFTGEKDAFPFAAIAMALTASFSTVLVSIPAVRGALVRLALGA 514
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: A0A0M0JFD6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFD6_9EUKA) HSP 1 Score: 252 bits (643), Expect = 9.840e-70 Identity = 174/420 (41.43%), Postives = 241/420 (57.38%), Query Frame = 1
Query: 1513 LATGTSFTAIVVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEGIVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSVNALKLLLLVCGGWFVSLSSTAAVVGALSTPADASTTDSAAPPKTLAPVFRGSFV---------RDLGAGAVVSGVLAVAGGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRM-PRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLLGLPTTLRLAALSRNITSPLAMAICSLVGADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLV 2742
L TG+S I+ A+ ALR+ F I FP LAGM+ LF GL + +P A + ++L PG A ++RWL +FF P+LVVLPL S A +LLL++ GG S+ A V + A +A P +P GS V R + A + +SG+LA+ G+ + G ++A++ A + LL T+ G+ AG ++ P + VHP++ C+ +G AA G F L YL G+LLL +LGP+ LSF QM+ RR ++ E ++ ++A +V A GLFGTA+ RLL LP +RLAALSR +T+PLA+ I L+ ADPSLA IVVLTG++ ANFG LDAL + P RGLA G + HG+GTAAM +E AF F+A+ MAL A STVLV
Sbjct: 54 LVTGSSLGGIIGANLALRQLFAMCAIRFPSPLAGMLLLFGGLCATQALSPALASRLEAALAPGCAFISRWLALFFVPNLVVLPLVLSMSPFEAARLLLVIVGGLACSIPLAALVAVSALPKASPDAAATAKAPVEASPATSGSAVLASQSSSPLRSIVAASTLSGLLAI--GANRLVGGVVARML---AFVHLLTCTVCGYVAGQKVVPVAAQRIVHPLITCTLSTLGALAAFAAATGQPFRPFLRGYLVPGGA-AFAAPGNLLLFMLGPATLSFGFQMFGRRRLMAESSRAISAATVTSAIFGLFGTAVAGRLLSLPLPVRLAALSRQVTAPLAIEIAKLLSADPSLAATIVVLTGLLAANFGRVILDALRIDAPVARGLAMGTAGHGVGTAAMASEKEAFPFAAIGMALNAATSTVLV 467
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: A0A1Z5JZL6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZL6_FISSO) HSP 1 Score: 248 bits (633), Expect = 3.020e-68 Identity = 182/429 (42.42%), Postives = 248/429 (57.81%), Query Frame = 1
Query: 1543 VVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEGIVSSLEPGAALLARWLPVFFAPSLVVLPLSPP-PSSVNALKLLLLVCGGWFVSLSSTAAVVGAL------STPADASTTD--SAAPPKTLAPV----FRGSFVRDLGAGAVVSGVLAVAGGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLLGLPTT-LRLAALSRNITSPLAMAICSLVGADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLVXXXXXXXXXXXLALG 2787
V+ D A R F A + FP SL G LFA + L PK++ + L PGAALLA+WLPVFF PSL+ LPL+ +S +K++ +V GG+F +L S A V A+ +P A D S A + V F L +V G+L +A + L++ ++ L LL TLS F G R+P++++ +HP+++C++ A A+ G F +L SY T S GAGD+LL LLGP+V+S A+ MY +R ++ ++ +V GL+GTAL+ RLL + LRL+ LSRNITSPLAMAI ++GAD SLA+ VV+TGV GANFGAT L ALG+KDP RGL+ G SAHGLGTAA NE AF F+A++MALTA+A+TV+V LALG
Sbjct: 75 VLFDIAFRTLFKAAKVDFPSSLGGCGFLFATFLALP---PKASSFLYEKLTPGAALLAKWLPVFFVPSLITLPLADSIGTSAELIKVVGIVIGGFFFTLLSAAFSVIAVRKAMGNESPVKAEIEDLTSKATQNVMNTVPLKPFSDECFHALTLTSVGLGLLTLASKFAG-----ITVLARQSSALFLLATTLSTFVYGARLPKKLTTIIHPLLVCTSFTWVVARALAAATGQSFRSILKSYRTGSLGLKTSGAGDILLFLLGPAVISLAISMYEKRKLMRDNLAEVGTAVGVSTFGGLYGTALLVRLLDVGNPFLRLSLLSRNITSPLAMAIAGIIGADVSLAVTAVVITGVFGANFGATILTALGIKDPVARGLSIGASAHGLGTAAFANEKDAFPFAAIAMALTASAATVVVSIPFFRRILLQLALG 495
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: B7FZ18_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ18_PHATC) HSP 1 Score: 248 bits (634), Expect = 4.460e-68 Identity = 185/428 (43.22%), Postives = 249/428 (58.18%), Query Frame = 1
Query: 1537 AIVVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEGIVSSLEPGAALLARWLPVFFAPSLVVLPLSPP-PSSVNALKLLLLVCGGWFVSLSSTAAVVGALSTPADASTTDSAAPPKTLAPV--------------------FRGSFVRDLGAGAVVSGVLAVA---GGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLLGLPT-TLRLAALSRNITSPLAMAICSLVG-ADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLV 2742
A V D A RR F++A +AFP SL G L A L+ L R K+A S+L+PGA +LA+WLPVFF PSLV LPL+ SS K+ ++ GG+ +L +T+A V A+ + T +P + L + F S L V SG+ A G+ A + P L +L +TL+ F G R+P+ ++K +HP+V C+++ AAA + G FA ML SY T S + GAGD LL LLGP+V+S AV MY RR ++ E+ +V GLFGTA R L + +RL+ LSRNITSPLAM+I S++G AD SLA+++VV+TG+IGANFGAT LDALG++D RGL G +AHGLGTAA+VNE AF F+A+SMALTA+A+TV V
Sbjct: 91 AFCVLDVAFRRGFLKANVAFPSSLGGCGILLALLLALPR---KTAGKAFSALKPGADVLAKWLPVFFVPSLVTLPLADSLGSSAELAKVAAVIVGGFLFTLVTTSASVVAVRSLLSGDTNRDESPEEALPKIDAVSQEAIADGRDPFPTIKPFDDSTATMLYGLTVFSGLAAAKLTLDGASYAT-------TTPLTALFMLSSTLASFVWGARLPKALTKVLHPLVTCTSLTWAAAAAFARVTGRSFASMLQSYRTGSLGKMA-GAGDWLLFLLGPAVVSLAVSMYDRRKLMRENIPEVGTSIGVSTFGGLFGTAWAVRFLSIGNPAVRLSLLSRNITSPLAMSIASILGGADVSLAVSMVVITGLIGANFGATLLDALGIRDAVARGLGMGAAAHGLGTAAIVNEKDAFPFAAISMALTASAATVAV 507
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: A0A7S2PQH5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQH5_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.110e-67 Identity = 175/434 (40.32%), Postives = 253/434 (58.29%), Query Frame = 1
Query: 1540 IVVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEGIVSSLEPGAALLARWLPVFFAPSLVVLPLSPP-PSSVNALKLLLLVCGGWFVSLSSTA-AVVGA--------LSTPADASTTDSAAPPK-TLAP---VFRGSFVRDLGAGAVVSGVLAVAGGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSY---LTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLLGLP-TTLRLAALSRNITSPLAMAICSLVGADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLVXXXXXXXXXXXLALG 2787
++ D R F + I FP SLAG LFA ++ + + E I ++L PGA LLA+WLPVFF PSL+ LPL+ +S+ LKL ++ GG+F +L +TA +V+G S T++ AP K T P F + +++L A +SG+ AV G Q+ +L+ L LL +TL+ F G +P+ +K VHP++ CS++ + + G F D++ Y ++ P+ GAGD+LL LLGP+V++ A QMY R+ ++ E+ K+V ++ + GL+GTA RLLG+ T++RL+ LSRNITSPLAMAI +++GAD SLA+ IVVLTG+ GANFGA+ LDA G+KD RGL G +AH NE AF F+A++MALTA+A TVL+ LALG
Sbjct: 94 LIFLDVQFRSLFTKYSIPFPSSLAGCGSLFATMIAVTSMKEEWGEAIYNTLNPGAGLLAKWLPVFFVPSLITLPLAGSLGNSLEILKLFTVIIGGFFFTLFTTAWSVLGIRRLMGGXXXXXXXXVSATEAVAPVKATTNPPPKAFSTTLLKNLATLAGISGIAAV-GAIKQSATQLITPLQSS----FLLFSTLASFVFGANLPKSFTKTVHPLITCSSLTWVASTLMASLTGRTFIDIIKLYKAGISPLAAPLSTGAGDVLLFLLGPAVVALACQMYGRKKLMRENIKEVGISTIVSSLGGLYGTAAAVRLLGMGNTSIRLSLLSRNITSPLAMAIATILGADVSLAVTIVVLTGLFGANFGASILDAFGIKDAVARGLGIGAAAHXXXXXXFANEKDAFPFAAIAMALTASAVTVLISIPAVKKSVLSLALG 522
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: B8CB30_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB30_THAPS) HSP 1 Score: 246 bits (627), Expect = 4.070e-67 Identity = 179/435 (41.15%), Postives = 251/435 (57.70%), Query Frame = 1
Query: 1540 IVVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEG--IVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSV-NALKLLLLVCGGWFVSLSSTA-AVVGALSTPADASTTDSAAPPKTLAPV--------------FRGSFVRDLGAGAVVSGVLAVAGGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLLGLPTTL-RLAALSRNITSPLAMAICSLVGADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLVXXXXXXXXXXXLALG 2787
+++ D R F + I FP SLAG LFA ++V++ + KS G + L PGA LLA+WLPVFF PSL+ LPL+ + LK+L +V GG+F +L +T+ +V+G D+A P + PV F + R L A A ++G+ +V ++P + +KP LL TLS F G +P+R +K VHP+V C+ + + G F +L SY + P+ GAGD+LL LLGP+V++ + QMY R+ ++ E+ +V ++ + GL+GTA RLL + + RL+ LSRNITSPLAMAI S++GAD SLA+ IVVLTG+ GANFGA+ LDA G+KD RGL G +AHGLGTAA +E AF F+A++MALTA+A TVLV LALG
Sbjct: 98 LILLDTQFRSLFTKYSIPFPSSLAGCGTLFATMLVMDSLSGKSKMGNEVYQLLNPGAMLLAKWLPVFFVPSLITLPLASGLGNAWEVLKVLSVVIGGFFFTLFTTSWSVLGIRKLMGG----DTATEPVPIYPVDASNVPVTNKQPQAFSLTLFRTLKAFAWLTGISSVTL-INKSPAS---QWNKPLQSAFLLSITLSSFVFGANLPKRFTKTVHPLVTCAGLTWLASKTFAMLTGSTFLAILQSYKAGTLAPLSAGAGDVLLFLLGPAVVALSCQMYGRKKLMRENIPEVGISTLVSSLGGLYGTAAAVRLLNIVNPMIRLSLLSRNITSPLAMAIASILGADVSLAVTIVVLTGLFGANFGASILDAAGIKDSVARGLGIGAAAHGLGTAAFADEKDAFPFAAIAMALTASACTVLVSIPAVKNSVLKLALG 524
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: A0A7S2N5T4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N5T4_9EUKA) HSP 1 Score: 245 bits (626), Expect = 5.300e-67 Identity = 179/450 (39.78%), Postives = 252/450 (56.00%), Query Frame = 1
Query: 1432 GLSAAEATDVPQAPTPATASSSSGPSFL----ATGTSFTAIVVADFALRRAFVRAGIAFPPSLAGMVGLFAGLVVLERAAPKSAEGIVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSVNALKLLLLVCGGWFVSLSSTAAVVGAL--------STPADASTTDSAAPPKTLAPVFRGSFVRDLGAGAVVSGVLAVAGGSGQAPGELLAKLSKPAAQLSLLLATLSGFAAGTRM-PRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSYLTRSRCPVHLGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLLGLPTTLRLAALSRNITSPLAMAICSLVGADPSLAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLV 2742
GL ++ P+AP+P +S+SS L ATG S I+ D LRR FV I FP SLAGM+GLF L ++ P+ A+G+ ++ PG A ++RWL +FF P+LV+ PL ++++A++LL L+ G SL A A STP+ + + +P R L ++GV AV S G ++ A LL +T+ GF G ++ P+R K +HP++ C+ + + AA A L YL P + G+LLL +LGP+ LSF QM+ RR+++ + A+ V+ +T GLF TAL +RLL L +RLAA+SR +T+PLA+AI ++ ADPSLA IVV+TG++ ANFG LDALGV P RGLA G + HGLGTAAM E AF F+A++MAL A ASTVLV
Sbjct: 65 GLPSSSRAAPPRAPSPLLSSASSVRQPLVQPLATGASLGGIIAVDVTLRRLFVARAIPFPSSLAGMLGLFGALCTMQAWRPELAQGVAAAAAPGCAFISRWLALFFVPNLVLFPLVLQMTALDAMRLLWLLVVGLAASLPLAALTASAALSDTTTAGSTPSGDGSVATPSPXXXXXXXXXPKPWRPLLLTPTLTGVTAVL--SHHLVGGFVSTFVTNA---HLLTSTVCGFVGGQQLVPKRTQKVLHPLITCTIATLASVAAFALATAQPIATALRGYLVVGGLP-YSAPGNLLLFMLGPATLSFGFQMFSRRALMAQSARAVSLVVAVSSTFGLFATALAARLLNLAVPVRLAAVSRQVTAPLAIAIAGMLSADPSLAATIVVITGLLAANFGRATLDALGVTSPVARGLAMGAAGHGLGTAAMAEETEAFPFAAIAMALNAAASTVLV 508
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Match: A0A7S4ABH7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABH7_9STRA) HSP 1 Score: 243 bits (621), Expect = 5.280e-66 Identity = 186/432 (43.06%), Postives = 247/432 (57.18%), Query Frame = 1
Query: 1552 DFALRRAFVRAGIA--FPPSLAGMVGLFAGLVVLERAAPKSAEGIVSSLE----PGAALLARWLPVFFAPSLVVLPLSPPPSSVNA----LKLLLLVCGGWFVSLSSTAA--------------VVGALSTPADASTTDSAAP--PKTLAPVFRGSFVRDLGAGAVVSGVLAVAGGSG---QAPGELLAKLSKPAAQLSLLLATLSGFAAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLGSY-LTRSRCPVH-LGAGDLLLGLLGPSVLSFAVQMYRRRSIIFEDAKQVAAGSVFCATSGLFGTALVSRLLGL-PTTLRLAALSRNITSPLAMAICSLVGADPS---LAIAIVVLTGVIGANFGATALDALGVKDPATRGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATASTVLV 2742
D A RR F R +A FP SL G + A L++ +++P S + S L PGAALLA+WLPVFF PSLV LPL S+ LK L +V GG++ +L +TA VV P S +SA P P +A F ++ L A+ S + A+ G + AP LL K P L L TL+GF G RM ++ K VHP+V C+AV K V F ML +Y + + ++ G GD+LL LLGP+V+S A+ MY +R +I E+ Q+A + GLFGTA + RL+GL + R+A LSRNITSPLAMAI L+GA S LA+A+VV+TG+ GANFGA +L+A+G+K+P RG+ G +AHGLGTAA V+E AF F+A+SMALTATA T LV
Sbjct: 105 DVAFRRLFQRLNLASKFPSSLGGCGVVLAVLLLSSKSSPSSTQTKESKLHRLLSPGAALLAKWLPVFFVPSLVTLPLVGGIDSLGGPAELLKTLAVVLGGFYFTLLTTAGSVLGVGKLMGKKANVVEKEEPPVATSDFESAMPETPVPVAKPFSDELMKKLRITAIFSCLFALEGATPVFTSAPARLLVKFQAPVLSLLLGSTTLTGFVYGVRMDPKIKKVVHPLVTCTAVTWTVMQIFSKCVERSFGSMLTAYKMGKGFNGLYGTGPGDILLFLLGPAVMSLAISMYDKRDLIQENFAQIATAVSVSSVGGLFGTAWMVRLIGLMQPSFRVALLSRNITSPLAMAIAGLLGASASTVSLAVALVVVTGLFGANFGAASLNAMGIKNPVARGMGIGAAAHGLGTAAFVDEKDAFPFAAISMALTATACTCLV 536 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1610.4458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1610.4458.1 >prot_Ecto-sp13_S_contig1610.4458.1 ID=prot_Ecto-sp13_S_contig1610.4458.1|Name=mRNA_Ecto-sp13_S_contig1610.4458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=532bp MARPSLLIVLLAVSCHRTSGFALRGPVHARRCRTSAPFARRTLCATPRPRback to top mRNA from alignment at Ecto-sp13_S_contig1610:8314..15840+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1610.4458.1 ID=mRNA_Ecto-sp13_S_contig1610.4458.1|Name=mRNA_Ecto-sp13_S_contig1610.4458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7527bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1610:8314..15840+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1610:8314..15840+ >mRNA_Ecto-sp13_S_contig1610.4458.1 ID=mRNA_Ecto-sp13_S_contig1610.4458.1|Name=mRNA_Ecto-sp13_S_contig1610.4458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1596bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1610:8314..15840+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |