mRNA_Ecto-sp13_S_contig16098.4453.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig16098.4453.1
Unique Name	mRNA_Ecto-sp13_S_contig16098.4453.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: A0A6H5JST0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JST0_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 6.220e-37
Identity = 72/82 (87.80%), Postives = 74/82 (90.24%), Query Frame = 1

Query:    1 RNSGSLPKQMTDTPREAAEALIRKGYAQGGSSRPGQSASGGTGGAAAGAPMKRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 246
            R+S  LPK+MTDTPREAAEALIRKGY Q GSSRPGQ ASGG  GA AGAPMKRRRWYLGIQSKKDPAHVMTEVYRALLQLGC
Sbjct:  377 RSSAPLPKEMTDTPREAAEALIRKGYGQSGSSRPGQPASGGPAGAVAGAPMKRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 458

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: A0A836C9Y0_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.670e-12
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 1

Query:  148 PMKRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 246
            P K+RRWYLGIQSKKDPAHVMTEVYRALLQLGC
Sbjct:  385 PAKKRRWYLGIQSKKDPAHVMTEVYRALLQLGC 417

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: A0A836CN18_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN18_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.240e-11
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 1

Query:   97 RPGQSASGGTGGAAAGAPMKRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 246
            RPG +  GG+  +AA    K+RRW+LGIQSKKDPAHVMTEVYRALL+LGC
Sbjct:  456 RPGDAGGGGSALSAA----KKRRWFLGIQSKKDPAHVMTEVYRALLRLGC 501

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: A0A7S3JSI0_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSI0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.100e-10
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 1

Query:  154 KRRRWYLGIQSKKDPAHVMTEVYRALLQLGCHGTT 258
            +RRRWYLGIQSKKDPAHVMTEVY+ALLQL C   T
Sbjct:  434 RRRRWYLGIQSKKDPAHVMTEVYKALLQLNCEWKT 468

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: A0A7S2W5U8_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5U8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.290e-10
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 1

Query:  148 PMKRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 246
            P +RRRWYLGIQSKK+PAHVMTEVY+AL  LGC
Sbjct:  401 PTRRRRWYLGIQSKKEPAHVMTEVYKALASLGC 433

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: A0A6H5J9V4_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V4_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 7.510e-10
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 1

Query:  127 GGAAAGAPMKRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 246
            GG+++G   KRRRWYLGIQS+K+ AHVMTEVYRAL+ LGC
Sbjct:  520 GGSSSGGAGKRRRWYLGIQSRKEAAHVMTEVYRALIHLGC 559

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: A0A7S3V4V3_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4V3_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.360e-9
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 1

Query:  154 KRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 246
            + RRWYLGIQSKKDPAHVMTEVY+ALL LGC
Sbjct:  497 RNRRWYLGIQSKKDPAHVMTEVYKALLSLGC 527

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: A0A7S1B3M6_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3M6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.850e-9
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 1

Query:  154 KRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 246
            + RRWYLGIQSKKDPAHVMTEVY+ALL LGC
Sbjct:  457 RNRRWYLGIQSKKDPAHVMTEVYKALLALGC 487

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: B8BT41_THAPS (Non-specific serine/threonine protein kinase n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BT41_THAPS)

HSP 1 Score: 63.2 bits (152), Expect = 2.470e-9
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 1

Query:  145 APMKRRRWYLGIQSKKDPAHVMTEVYRALLQLGC 246
            A  + RRWYLGIQSKKDPAHVMTEVY+AL+ LGC
Sbjct:  380 ARFQNRRWYLGIQSKKDPAHVMTEVYKALMALGC 413

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BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Match: W7TMX0_9STRA (Non-specific serine/threonine protein kinase (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMX0_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.540e-9
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 1

Query:  160 RRWYLGIQSKKDPAHVMTEVYRALLQLGCHGTTTS 264
            RRWYLGIQSKKDPAHVMTEVY+ALLQL C  +  S
Sbjct:  445 RRWYLGIQSKKDPAHVMTEVYKALLQLRCEWSAVS 479

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig16098.4453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JST0_9PHAE	6.220e-37	87.80	Protein kinase domain-containing protein n=2 Tax=E...	[more]
A0A836C9Y0_9STRA	2.670e-12	93.94	Non-specific serine/threonine protein kinase n=1 T...	[more]
A0A836CN18_9STRA	3.240e-11	70.00	Non-specific serine/threonine protein kinase n=1 T...	[more]
A0A7S3JSI0_9STRA	2.100e-10	82.86	Non-specific serine/threonine protein kinase n=1 T...	[more]
A0A7S2W5U8_9STRA	5.290e-10	81.82	Non-specific serine/threonine protein kinase n=1 T...	[more]
A0A6H5J9V4_9PHAE	7.510e-10	72.50	Non-specific serine/threonine protein kinase n=1 T...	[more]
A0A7S3V4V3_9STRA	1.360e-9	87.10	Non-specific serine/threonine protein kinase n=2 T...	[more]
A0A7S1B3M6_9STRA	1.850e-9	87.10	Non-specific serine/threonine protein kinase n=1 T...	[more]
B8BT41_THAPS	2.470e-9	79.41	Non-specific serine/threonine protein kinase n=2 T...	[more]
W7TMX0_9STRA	2.540e-9	80.00	Non-specific serine/threonine protein kinase (Frag...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig16098	contig	Ecto-sp13_S_contig16098:231..3729 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	1
Seed ortholog score	112.1
Seed ortholog evalue	1.5e-22
Seed eggNOG ortholog	2880.D7G746
Preferred name	PRKAA2
Model size	328
KEGG ko	ko:K07198,ko:K12761,ko:K21989
KEGG Pathway	ko04068,ko04113,ko04138,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04113,map04138,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000075,GO:0000077,GO:0000082,GO:0000086,GO:0000166,GO:0000187,GO:0000226,GO:0000278,GO:0000302,GO:0000307,GO:0000322,GO:0000323,GO:0000324,GO:0000902,GO:0000904,GO:0001101,GO:0001302,GO:0001403,GO:0001558,GO:0001666,GO:0001678,GO:0001932,GO:0001934,GO:0002791,GO:0002792,GO:0002793,GO:0003006,GO:0003674,GO:0003682,GO:0003824,GO:0004672,GO:0004674,GO:0004679,GO:0004690,GO:0004691,GO:0004693,GO:0004703,GO:0004712,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005641,GO:0005654,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005794,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005993,GO:0005996,GO:0006006,GO:0006082,GO:0006109,GO:0006110,GO:0006111,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006259,GO:0006260,GO:0006325,GO:0006355,GO:0006417,GO:0006464,GO:0006468,GO:0006629,GO:0006631,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0006950,GO:0006974,GO:0006977,GO:0006979,GO:0006986,GO:0006995,GO:0006996,GO:0007005,GO:0007010,GO:0007017,GO:0007049,GO:0007050,GO:0007093,GO:0007098,GO:0007099,GO:0007124,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007346,GO:0007399,GO:0007548,GO:0007568,GO:0007569,GO:0007584,GO:0007610,GO:0008022,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008285,GO:0008340,GO:0008361,GO:0008406,GO:0008610,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009267,GO:0009272,GO:0009311,GO:0009313,GO:0009314,GO:0009409,GO:0009410,GO:0009411,GO:0009416,GO:0009453,GO:0009593,GO:0009594,GO:0009605,GO:0009628,GO:0009631,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009743,GO:0009746,GO:0009749,GO:0009755,GO:0009756,GO:0009791,GO:0009887,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010050,GO:0010150,GO:0010182,GO:0010212,GO:0010243,GO:0010259,GO:0010332,GO:0010389,GO:0010468,GO:0010494,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010565,GO:0010570,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010676,GO:0010720,GO:0010769,GO:0010770,GO:0010821,GO:0010822,GO:0010827,GO:0010828,GO:0010829,GO:0010876,GO:0010893,GO:0010906,GO:0010907,GO:0010941,GO:0010948,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0014074,GO:0014823,GO:0014850,GO:0015030,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016052,GO:0016202,GO:0016236,GO:0016239,GO:0016241,GO:0016301,GO:0016310,GO:0016324,GO:0016358,GO:0016569,GO:0016570,GO:0016572,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0017148,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019207,GO:0019209,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019395,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019722,GO:0019725,GO:0019752,GO:0019887,GO:0019899,GO:0019900,GO:0019904,GO:0019915,GO:0019932,GO:0019954,GO:0022008,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022622,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030258,GO:0030295,GO:0030330,GO:0030332,GO:0030424,GO:0030425,GO:0030447,GO:0030554,GO:0030674,GO:0030730,GO:0030808,GO:0030810,GO:0030811,GO:0030813,GO:0031000,GO:0031023,GO:0031156,GO:0031175,GO:0031285,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031505,GO:0031570,GO:0031571,GO:0031588,GO:0031593,GO:0031667,GO:0031668,GO:0031669,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032006,GO:0032007,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032870,GO:0032879,GO:0032880,GO:0032886,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033135,GO:0033157,GO:0033500,GO:0033554,GO:0033674,GO:0033993,GO:0034248,GO:0034249,GO:0034284,GO:0034440,GO:0034599,GO:0034614,GO:0034641,GO:0034645,GO:0034654,GO:0034694,GO:0034695,GO:0034762,GO:0034763,GO:0034764,GO:0035088,GO:0035173,GO:0035174,GO:0035262,GO:0035404,GO:0035556,GO:0035639,GO:0035690,GO:0035770,GO:0035966,GO:0036094,GO:0036211,GO:0036267,GO:0036270,GO:0036279,GO:0036293,GO:0036294,GO:0036464,GO:0036477,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042149,GO:0042221,GO:0042304,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042493,GO:0042542,GO:0042546,GO:0042556,GO:0042557,GO:0042592,GO:0042593,GO:0042594,GO:0042595,GO:0042710,GO:0042752,GO:0042770,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043255,GO:0043279,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043467,GO:0043470,GO:0043549,GO:0043562,GO:0043900,GO:0043933,GO:0044010,GO:0044057,GO:0044058,GO:0044085,GO:0044087,GO:0044093,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044271,GO:0044275,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0044839,GO:0044843,GO:0045137,GO:0045177,GO:0045178,GO:0045197,GO:0045229,GO:0045471,GO:0045540,GO:0045542,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045722,GO:0045786,GO:0045787,GO:0045792,GO:0045821,GO:0045833,GO:0045834,GO:0045844,GO:0045859,GO:0045860,GO:0045893,GO:0045913,GO:0045923,GO:0045927,GO:0045930,GO:0045935,GO:0045937,GO:0045940,GO:0045981,GO:0046015,GO:0046034,GO:0046317,GO:0046318,GO:0046320,GO:0046321,GO:0046324,GO:0046325,GO:0046326,GO:0046352,GO:0046390,GO:0046483,GO:0046677,GO:0046777,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046889,GO:0046890,GO:0046956,GO:0048364,GO:0048366,GO:0048367,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048634,GO:0048636,GO:0048641,GO:0048643,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048827,GO:0048856,GO:0048858,GO:0048869,GO:0048871,GO:0048878,GO:0050708,GO:0050709,GO:0050714,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050810,GO:0050896,GO:0050920,GO:0050921,GO:0050994,GO:0050995,GO:0051020,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051055,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051194,GO:0051196,GO:0051197,GO:0051222,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051259,GO:0051270,GO:0051272,GO:0051276,GO:0051291,GO:0051298,GO:0051321,GO:0051338,GO:0051347,GO:0051493,GO:0051592,GO:0051606,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0052128,GO:0055081,GO:0055082,GO:0055086,GO:0055088,GO:0055089,GO:0055114,GO:0060090,GO:0060176,GO:0060249,GO:0060255,GO:0060284,GO:0060341,GO:0060548,GO:0060627,GO:0060968,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061245,GO:0061458,GO:0061695,GO:0061744,GO:0061762,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070050,GO:0070201,GO:0070301,GO:0070482,GO:0070507,GO:0070542,GO:0070726,GO:0070783,GO:0070887,GO:0070925,GO:0071156,GO:0071158,GO:0071215,GO:0071229,GO:0071236,GO:0071241,GO:0071248,GO:0071277,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071361,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071417,GO:0071453,GO:0071456,GO:0071495,GO:0071496,GO:0071554,GO:0071555,GO:0071704,GO:0071731,GO:0071732,GO:0071840,GO:0071852,GO:0071900,GO:0071902,GO:0071940,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072521,GO:0072522,GO:0080022,GO:0080090,GO:0080134,GO:0080135,GO:0090033,GO:0090043,GO:0090066,GO:0090068,GO:0090087,GO:0090153,GO:0090155,GO:0090181,GO:0090205,GO:0090304,GO:0090311,GO:0090316,GO:0090407,GO:0090604,GO:0090606,GO:0090693,GO:0097009,GO:0097124,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:0097366,GO:0097367,GO:0097447,GO:0097458,GO:0097472,GO:0097574,GO:0097708,GO:0098534,GO:0098590,GO:0098772,GO:0099004,GO:0099402,GO:0106118,GO:0106120,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140030,GO:0140096,GO:1900060,GO:1900076,GO:1900077,GO:1900371,GO:1900373,GO:1900428,GO:1900430,GO:1900434,GO:1900436,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901261,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901563,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901861,GO:1901863,GO:1901983,GO:1901985,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902170,GO:1902400,GO:1902402,GO:1902403,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902554,GO:1902667,GO:1902669,GO:1902680,GO:1902749,GO:1902806,GO:1902807,GO:1902911,GO:1902930,GO:1902932,GO:1903047,GO:1903108,GO:1903109,GO:1903214,GO:1903432,GO:1903506,GO:1903508,GO:1903530,GO:1903531,GO:1903532,GO:1903533,GO:1903578,GO:1903580,GO:1903664,GO:1903665,GO:1903747,GO:1903749,GO:1903827,GO:1903829,GO:1903955,GO:1904262,GO:1904428,GO:1904950,GO:1904951,GO:1905038,GO:1990234,GO:1990794,GO:1990904,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000241,GO:2000303,GO:2000756,GO:2000758,GO:2000765,GO:2000766,GO:2001141,GO:2001169,GO:2001171,GO:2001273,GO:2001274
Exons	4
EggNOG free text desc.	protein serine/threonine kinase activity
EggNOG OGs	KOG0583@1,KOG0583@2759
Ec32 ortholog description	SNF1-related protein kinase
Ec32 ortholog	Ec-01_011080.3
EC	2.7.11.1,2.7.11.11
Cds size	300
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko01001,ko02000,ko03029,ko04131

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462849.47026-UTR-Ecto-sp13_S_contig16098:230..257	1681462849.47026-UTR-Ecto-sp13_S_contig16098:230..257	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig16098 231..257 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462849.483908-CDS-Ecto-sp13_S_contig16098:257..302	1681462849.483908-CDS-Ecto-sp13_S_contig16098:257..302	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig16098 258..302 +
1681462849.4940226-CDS-Ecto-sp13_S_contig16098:1134..1278	1681462849.4940226-CDS-Ecto-sp13_S_contig16098:1134..1278	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig16098 1135..1278 +
1681462849.5063124-CDS-Ecto-sp13_S_contig16098:1978..2006	1681462849.5063124-CDS-Ecto-sp13_S_contig16098:1978..2006	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig16098 1979..2006 +
1681462849.514556-CDS-Ecto-sp13_S_contig16098:3646..3729	1681462849.514556-CDS-Ecto-sp13_S_contig16098:3646..3729	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig16098 3647..3729 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig16098.4453.1	prot_Ecto-sp13_S_contig16098.4453.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig16098 258..3729 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig16098:231..3729+
coding sequence from alignment at Ecto-sp13_S_contig16098:231..3729+

protein sequence of mRNA_Ecto-sp13_S_contig16098.4453.1

>prot_Ecto-sp13_S_contig16098.4453.1 ID=prot_Ecto-sp13_S_contig16098.4453.1|Name=mRNA_Ecto-sp13_S_contig16098.4453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
MTDTPREAAEALIRKGYAQGGSSRPGQSASGGTGGAAAGAPMKRRRWYLG
IQSKKDPAHVMTEVYRALLQLGCHGTTTSRAGNGHSAHARPAAATAAVPS

mRNA from alignment at Ecto-sp13_S_contig16098:231..3729+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig16098.4453.1 ID=mRNA_Ecto-sp13_S_contig16098.4453.1|Name=mRNA_Ecto-sp13_S_contig16098.4453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3499bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16098:231..3729+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGGAATTCGGGGTCGCTGCCGAAGCAGATGACGGACACCCCACGGGAGGC
TGCTGAAGCACTCATTAGAAAGGTGGGTGGGCCCTATTGGCGTGGTAGGC
AGCAGGGGGTGACGCAGGGTGTGTGTGCCTGAGGTAGGCGGCGGAATCTG
GCAGTGTCTTATATATGGATCTGGATTTGGTCCCGTCAGCGCGTACTGCG
GAGCTGAATTGCGCTGAAAGGCATGAAATTTGCGTCCATCTCAGGGTCGG
TTGAGATGTAATGCATGCCTCATTTCGTTGGGGACGAGAAAGTTTGACAC
GGCTTCTTGTGTGTTGTGATGGGCTACCCTAGGATGTCTAGTACAAACGA
GGAGGAAACCGACGGCTTCGCGTTTCGCATGGCATCGCAAAAGCTTGAAG
CCAATCGGGTTTCGATTCAGCGATCCTGCAACCCAGTGTCCCTCTCATAA
CGGGAAAGCAACTGCAAGTAGAAATCACGTACGTTTGGGTGATGTTGTAT
GAAGCCCGGTGGTCATAGATGGTTCAGACCTGCCACATATCACGCGCTCC
AGATGAGGCGATTTTGTCTTCCTGTGATAACGGCTACGGCTCCGCTTTCG
AGCGTATCGACAGCAGACTCCTCCCCAACCAACGTGGTTGTTATCCTGCT
GAGCCAACATTCATAGCAGCAGGGCAAGGTACCTGTGGCTCATGTTTTGT
TGGAACTTCGACCACTCGCGGGCGTTACAAATCGTCTTCGTCTCTTGGTT
CTACCCCGCTTCTCAAGTTAGTGAGCACAACCGGGCGCTGATCTCCCCCT
ACTGTGCTCAGTGCTTCGGGGATGCTCTTGTTGTTACCCCGCTGCCTTCC
CGAGCAACACTGACGCCTTTCTCCCACTTGTGTTTTGTTCCTTTTATCCC
ACAGGGGTATGCGCAAGGCGGCAGCAGCCGTCCAGGACAATCAGCTTCAG
GTGGGACGGGGGGGGCAGCGGCGGGGGCACCGATGAAGCGAAGGCGATGG
TACCTGGGCATCCAGTCCAAGAAGGACCCGGCGCATGTCATGACGGAGGT
GAGTGAGCGAAAACGGTAGCAATGTCCGGCCGGAGATCCTGGTGCCGCGG
GTGGGTGGCGATGCCGTTCCATGGCCTCGAGTGTGACGTAAGGATAGCGT
GCGTATGTGCAGCCAGCGGCTGGCAGGAGGGAGACTGCTCCGGTTGCCGT
AGGGTTCCTCGTCTGTTATCAACGGAGGTTCCGGGCGGGGAGGCTACATA
CCTGTGGCTCGAGTGTCCGACGTGTTTATGCCTGACCTTTTTTCTGGTTT
ATCGTTGATCAGCGCTGCGCATTACGTCCATGAATCTTTCTTTGGTATGG
CAGTGTATCGAGTGTTCTTCTGCGCTAGAATCTATCAATCTTGTGGTGGT
GTTTTGCTGGGGTGTTTCCTGATTGCGTTGGCTAAAAGCTGACAGCCAAG
AATCATAACACAAATGAGTGTCAGCTCGACTTGTCTTTCCTGCTGTGTGC
TGCGCCCGCCACCTCGAGCTGTTGGGGCTGTATTCGGGCGGGTTCACCAG
CTGGTTGACACAGTTCGCGCAAGATTGACGGCGGTGTCATGCGGATATGT
ATTCGGTGCAGGGTAAACTGCTACTGCTGTTCATGCTGCAATTGTGAGAG
GAAGCTGGGGGTGGCTTGGCAGCACTAGCCGAGTTGTGGTCAATGTACAT
GATCCACAAAAAAAATAAACGACCTGGTTGCATACGCCACACATCCAGGT
GTACCGGGCGTTGCTGCAGCTGGGATGCGAGTGGCACCTGCACTCGTCGT
ACCGAATCCAGTGCATGTGGAAACCAGACGCCAAGCCGGTGATGCCGAGG
GGGGGCTTGAAACGGCCGGGGGGGCTTAGAACACCTCCAGGAGGGGCGGG
GCAGGGGGGCTACTCAGGCGGGGCCGGCGGCGGGCTGTCGAAGAGGGAGG
GGGGGGAGGGCACGGGAGGGGACAGGCTAGGGGCGGTCGGGACGGGGGAG
AGGACGGAGGAGTACAGAGTCGTCGCGGGGTTGACGCTGTACAAGGTCCA
GACGAACATCTACCTGCTGGACTTTCACAAACGAGAAGGAGACCAGTTCA
CCTTTATGGTAAGCCTCTTGGTCCCCATCCCCTCCGAACGAAGTGGTTGT
GTCACGACTTTTGTTTTTCGTGATGTGTTATTCTGGGGTTTTTGGTTGCC
TGATGCGTAGCACGTTATTTTACGCACGTACTTGATGACTGATGCAGGTG
TCGACCCCACCGACCGCATGTTCTCCACCCCGTCTTGGTTCGGGCCTCTA
GACGCACAGACCCTAGCGTAAGGCCGAGCCCTACGGCTTGTCGTCCCATT
CACGCATGACGCAACCGCCGTTTAGCCCAGTCGCCCAAAGGCCACTCAAA
CCGACCGCAGCATGCCACTGGGCAATCGTGGATTTGGGGGGTGTATGAAC
TGCTGCTGCGGCCGCTGGACTTGCTATCATTGCTCCTGTACAAGCACACA
CGCTTGTTTCCTGCTGTTTCGTTGGTGTGTCGGTGGTGCTTGTTCGGGAT
CCGCTATTTATACCGATGTTTATGCCATATTAGATGCACTGCGCCGCTTT
TCACGCGTTGACACTTTTTAATAACTCGCATGTTTCACGTCCATTCCTCG
CATGCTCCGTCAAAATGTTACAGACGCTGTGCGCGAAAATCATCATCCAG
CTCAAGACTCTCAGCGCTCAGAGTAAAATGCAGGTCACCGGCCGCCTGCA
GGTAATATATCGGCTTCTTGTATGCGATGTTTTCAGTGATATGTTTTCCA
GCTGTAATATACGTAGAGTACCATGCCACTGGACCGATGGGGTGTAACAC
TGCTTGCAAGGTTTGGCGACTACGGGGTCCCTTGTCCTGTATTTTGATGT
GGTCACGGATCTCAGTTACGTCCTACATTCCTCGAGAGGAGGGAAAAAAA
AAACATGAGGACACAGCGTCGTCCACGAGTGATTTTCGCAGTCGGCAACG
ACGTATACAGCGCGACACAGGCGTTTGGGAAGACAGCAGCAACACGTTGT
GCACGCGGGCAGCCGTCGCGACACCGGTCTTCACATTTTCATCATGCAAA
GGACGCCTCTCGTTCGAAGGAAAACGTGAATTTTGTGAAGATGTCGATGT
TGCCGTTATCGTGGGTATATCGAGAACTGTGTCCCCGCTGGCCATGTATT
CCGGACCCTTGATGAGTGATCCCGGCCATCACGACGAAATAGTGATGCTT
GAGCGGGGACGCGTCATGTCTATGTAGGGCTGAGATTCGATTTTTTGCGC
TGGGCACGCCGTGGACAGTCAATATGGTGCATATTGTGTGCAGATCTCTG
ATGTTACCGCCGACCACTGCCGCCGCTGCTGTCTCTGCTAACGCATCTCA
GCAAGTGAGCCCTCAGGCCATGGCACCACAACCTCAAGGGCAGGCAATGG
CCATTCCGCACATGCACGGCCAGCAGCAGCAACAGCCGCAGTACCGTCA

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16098:231..3729+

>mRNA_Ecto-sp13_S_contig16098.4453.1 ID=mRNA_Ecto-sp13_S_contig16098.4453.1|Name=mRNA_Ecto-sp13_S_contig16098.4453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=300bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16098:231..3729+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGGACACCCCACGGGAGGCTGCTGAAGCACTCATTAGAAAGGGGTA
TGCGCAAGGCGGCAGCAGCCGTCCAGGACAATCAGCTTCAGGTGGGACGG
GGGGGGCAGCGGCGGGGGCACCGATGAAGCGAAGGCGATGGTACCTGGGC
ATCCAGTCCAAGAAGGACCCGGCGCATGTCATGACGGAGGTGTACCGGGC
GTTGCTGCAGCTGGGATGCCATGGCACCACAACCTCAAGGGCAGGCAATG
GCCATTCCGCACATGCACGGCCAGCAGCAGCAACAGCCGCAGTACCGTCA