prot_Ecto-sp13_S_contig16091.4451.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16091.4451.1
Unique Nameprot_Ecto-sp13_S_contig16091.4451.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16091.4451.1 vs. uniprot
Match: D8LJ81_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ81_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 9.050e-59
Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 0 
Query:    1 MVSAFDVELPFPVRDGRRRRLSINEVATYRDIALTRGHAGRTLGKAKRALKMGAVEAARLVDIMRQVDVSAAGSLGRYDFSLALDRAGVELPAEDKDALFRSLSSARTAGT 111
            MVSAFDVELPFPVRDGRRRRLSINEVATYRDIALTRGHAG+ LGKAKRALKMG VEAARLVDIMRQVDVSAAGSLGR+DFSLALDRAGVELPAEDKDALFRSLSSARTAGT
Sbjct:    1 MVSAFDVELPFPVRDGRRRRLSINEVATYRDIALTRGHAGKALGKAKRALKMGTVEAARLVDIMRQVDVSAAGSLGRFDFSLALDRAGVELPAEDKDALFRSLSSARTAGT 111
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BLAST of mRNA_Ecto-sp13_S_contig16091.4451.1 vs. uniprot
Match: A0A6H5K5F8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F8_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.020e-26
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0 
Query:   52 MGAVEAARLVDIMRQVDVSAAGSLGRYDFSLALDRAGVELPAEDKDALFRSLSSARTAGT 111
            MG VEAARLVDIMRQVDVSA+GSLGRYDFSLALDRAGVELPAEDKDALFRSLSSARTAGT
Sbjct:    1 MGPVEAARLVDIMRQVDVSASGSLGRYDFSLALDRAGVELPAEDKDALFRSLSSARTAGT 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16091.4451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ81_ECTSI9.050e-5996.40EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5K5F8_9PHAE2.020e-2696.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16091contigEcto-sp13_S_contig16091:1273..3245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16091.4451.1mRNA_Ecto-sp13_S_contig16091.4451.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16091 1198..3245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16091.4451.1 ID=prot_Ecto-sp13_S_contig16091.4451.1|Name=mRNA_Ecto-sp13_S_contig16091.4451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
MVSAFDVELPFPVRDGRRRRLSINEVATYRDIALTRGHAGRTLGKAKRAL
KMGAVEAARLVDIMRQVDVSAAGSLGRYDFSLALDRAGVELPAEDKDALF
RSLSSARTAGT
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