prot_Ecto-sp13_S_contig16078.4445.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16078.4445.1
Unique Nameprot_Ecto-sp13_S_contig16078.4445.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length134
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16078.4445.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 4.800e-35
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0 
Query:    1 TSLTAGLAAGGAAAVSAIGAAVGLSGDKPDAELPSGDLDASASVPDASVDVKKPKKGLFGGLFGSKAKIEVPDANVSVPDVS 82
            TSL AGLAAGG AAV AIGAAVGLSGDKPDAELPSGDLDAS SVPDASVDVKKPKKGLFGGLFGSKAKIEVPDA+VS PDV+
Sbjct: 1487 TSLAAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDLDASVSVPDASVDVKKPKKGLFGGLFGSKAKIEVPDADVSAPDVT 1568
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BLAST of mRNA_Ecto-sp13_S_contig16078.4445.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 5.270e-31
Identity = 76/96 (79.17%), Postives = 78/96 (81.25%), Query Frame = 0 
Query:    1 TSLTAGLAAGGAAAVSAIGAAVGLSGDKPDAELPSGDLDASASVPDA-SVDVKKPKKGLFGGLFGSKAKIE------------VPDANVSVPDVSA 83
            TSLTAGLAAGG AAV AIGAAVGLSGDKPDAELPSGD+DAS SVPD  SVDVKKPKKGLFGGLFGSKAKIE            VPDA+VSVPD SA
Sbjct: 2403 TSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGGLFGSKAKIEASSSLKRRRARRVPDADVSVPDASA 2498
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BLAST of mRNA_Ecto-sp13_S_contig16078.4445.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.130e-16
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0 
Query:    1 TSLTAGLAAGGAAAVSAIGAAVGLSGDKPDAELPSGDLDASASVPDASVDVKKPKKGLFGGL 62
            TSLTAGLAA G A V AIGAAVGLSGDKPDAE+PSG +  S S+P+ASVD++KP+K LFGGL
Sbjct:  759 TSLTAGLAASGVAIVGAIGAAVGLSGDKPDAEVPSGVVHVSLSIPEASVDIRKPRKVLFGGL 820
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16078.4445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LB94_ECTSI4.800e-3591.46Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
A0A6H5K9M1_9PHAE5.270e-3179.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY67_9PHAE6.130e-1674.19Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16078contigEcto-sp13_S_contig16078:2754..3994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16078.4445.1mRNA_Ecto-sp13_S_contig16078.4445.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16078 2752..3994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16078.4445.1 ID=prot_Ecto-sp13_S_contig16078.4445.1|Name=mRNA_Ecto-sp13_S_contig16078.4445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp
TSLTAGLAAGGAAAVSAIGAAVGLSGDKPDAELPSGDLDASASVPDASVD
VKKPKKGLFGGLFGSKAKIEVPDANVSVPDVSADVSAPDVSGTMPDISGN
VSVPGISGDVSGPDVSGDMSVPDVSGSLNVPDVS
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