prot_Ecto-sp13_S_contig16078.4444.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16078.4444.1
Unique Nameprot_Ecto-sp13_S_contig16078.4444.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16078.4444.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.730e-50
Identity = 143/171 (83.63%), Postives = 150/171 (87.72%), Query Frame = 0 
Query:    2 AAVGAIGAAVGLSGDKPDVEVDASMPSVGDVSADVDVKVDDVDAKAPSSEVLKPKKGLFGLSFKKLSGKKLKVPDADAAVPDISGDVSVPDASVDVSXXXIDAKXXXXXXXXXXXXVIGPXXXXXXXXXXXXXXXXXXXXXVSGVEVPQVPRPSGEISGSAPELPSVDTSV 172
            AAVGAIGAAVGLSGDKPD EVDA MPSVGDVSAD+DVK+DDVDAKAPSSE+LKP+KGLFGLSFKKLSGKKLKVPDAD AVPD+SG            XXXIDAK XXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXX SGVEVP++PRPSGEISGSAPELPSVDTSV
Sbjct: 1726 AAVGAIGAAVGLSGDKPDAEVDAVMPSVGDVSADIDVKMDDVDAKAPSSEILKPRKGLFGLSFKKLSGKKLKVPDADVAVPDVSGXXXXXXXXXXXXXXXIDAKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVEVPELPRPSGEISGSAPELPSVDTSV 1896
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BLAST of mRNA_Ecto-sp13_S_contig16078.4444.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.540e-40
Identity = 120/170 (70.59%), Postives = 127/170 (74.71%), Query Frame = 0 
Query:    2 AAVGAIGAAVGLSGDKPDVEVDASMPSVGDVSADVDVKVDDVDAKAPSSEVLKPKKGLFGLSFKKLSGKKLKVPDADAAVPDISGDVSVPDASVDVSXXXIDAKXXXXXXXXXXXXVIGPXXXXXXXXXXXXXXXXXXXXXVSGVEVPQVPRPSGEISGSAPELPSVDTS 171
            AAVGAIGAAVGLSGDKPD EVDASMPSVGDV  DV VK D+VDAK+ S E  K KKGLFGLSFKKLSGKKLKVPD D AVPD+S             XX +DAK                XXXXXXXXXXXXXXXXXXXXX+SGVEVP++PRPSGE SGSAPELPSVDTS
Sbjct: 1350 AAVGAIGAAVGLSGDKPDAEVDASMPSVGDVLGDVGVKGDNVDAKSSSLEPFKLKKGLFGLSFKKLSGKKLKVPDGDVAVPDVSXXXXXXXXXXXXXXXDVDAKLPEVSGGLSTPDXGXXXXXXXXXXXXXXXXXXXXXXXLSGVEVPELPRPSGETSGSAPELPSVDTS 1519
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16078.4444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB94_ECTSI1.730e-5083.63Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
A0A6H5K9M1_9PHAE1.540e-4070.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16078contigEcto-sp13_S_contig16078:1143..2468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16078.4444.1mRNA_Ecto-sp13_S_contig16078.4444.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16078 1143..2468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16078.4444.1 ID=prot_Ecto-sp13_S_contig16078.4444.1|Name=mRNA_Ecto-sp13_S_contig16078.4444.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
AAAVGAIGAAVGLSGDKPDVEVDASMPSVGDVSADVDVKVDDVDAKAPSS
EVLKPKKGLFGLSFKKLSGKKLKVPDADAAVPDISGDVSVPDASVDVSVP
DIDAKLPEVSGELSAPDVIGPSISGDTSAAAPSIDAKIPSVDVSGVEVPQ
VPRPSGEISGSAPELPSVDTSVPSVA
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