prot_Ecto-sp13_S_contig16069.4438.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16069.4438.1
Unique Nameprot_Ecto-sp13_S_contig16069.4438.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16069.4438.1 vs. uniprot
Match: A0A6H5J4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4R7_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 7.790e-78
Identity = 156/182 (85.71%), Postives = 156/182 (85.71%), Query Frame = 0 
Query:    2 AAAAAAAANPDRGARLLLGSLLLETSLAAGLLALARSGRVPVSGEDEGADISAEPSRRRIPLRQHDRGGGGAGNAHDAGTPSVDGGGHAAAVAAATADAALIIARDAAALFPDGLWEGLRSDLLPALAAGACSGDVGGSGMRGGSFGDGGVGGIVDAGDVRAGLVLKEVVGGMGTGVVPYAA 183
            AAAAAAAANPDRG R LLGSLLLETSLAAGLLALARSG VPVSGEDEGADISAEPS RR  LRQH R GGGAGNAHD GTPSVDG           ADAALIIARDAAALFPDGLWEGLRSDLLPALAAGACSGDVGGSGMRGGSFGDG    I  AGDVRAGLVLKEVVGGMGTGVVPYAA
Sbjct:  519 AAAAAAAANPDRGERPLLGSLLLETSLAAGLLALARSG-VPVSGEDEGADISAEPSHRRTRLRQHRRSGGGAGNAHDGGTPSVDGXXXXXXXXXXXADAALIIARDAAALFPDGLWEGLRSDLLPALAAGACSGDVGGSGMRGGSFGDGXXXXIGVAGDVRAGLVLKEVVGGMGTGVVPYAA 699
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BLAST of mRNA_Ecto-sp13_S_contig16069.4438.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 2.790e-77
Identity = 155/181 (85.64%), Postives = 158/181 (87.29%), Query Frame = 0 
Query:    3 AAAAAAANPDRGARLLLGSLLLETSLAAGLLALARSGRVPVSGEDEGADISAEPSRRRIPLRQHDRGGGGAGNAHDAGTPSVDGGGHAAAVAAATADAALIIARDAAALFPDGLWEGLRSDLLPALAAGACSGDVGGSGMRGGSFGDGGVGGIVDAGDVRAGLVLKEVVGGMGTGVVPYAA 183
            AAAAAAANP RGAR LLGSLLLETSLAAGLLALARSGRVPVSGEDEGADISAEP+R  IPLRQH R GG AGNA D GTPSVDGGGHAAAVAAATADAALIIARDAA LFPDGLWEGLRSDLLPALAAGACSGDVGGSG+           G+  AGDVRAGLVLKEVVGGMGTGVVPYAA
Sbjct: 1390 AAAAAAANPHRGARPLLGSLLLETSLAAGLLALARSGRVPVSGEDEGADISAEPTRGGIPLRQHHRSGGDAGNAPDGGTPSVDGGGHAAAVAAATADAALIIARDAADLFPDGLWEGLRSDLLPALAAGACSGDVGGSGVSXXXXXXXXXIGV--AGDVRAGLVLKEVVGGMGTGVVPYAA 1568
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16069.4438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J4R7_9PHAE7.790e-7885.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBB5_ECTSI2.790e-7785.64Essential abundant protein involved in regulation ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.527

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16069contigEcto-sp13_S_contig16069:666..1214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16069.4438.1mRNA_Ecto-sp13_S_contig16069.4438.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16069 666..1216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16069.4438.1 ID=prot_Ecto-sp13_S_contig16069.4438.1|Name=mRNA_Ecto-sp13_S_contig16069.4438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
AAAAAAAAANPDRGARLLLGSLLLETSLAAGLLALARSGRVPVSGEDEGA
DISAEPSRRRIPLRQHDRGGGGAGNAHDAGTPSVDGGGHAAAVAAATADA
ALIIARDAAALFPDGLWEGLRSDLLPALAAGACSGDVGGSGMRGGSFGDG
GVGGIVDAGDVRAGLVLKEVVGGMGTGVVPYAA
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