prot_Ecto-sp13_S_contig16069.4437.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16069.4437.1
Unique Nameprot_Ecto-sp13_S_contig16069.4437.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length161
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16069.4437.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 7.670e-68
Identity = 134/161 (83.23%), Postives = 136/161 (84.47%), Query Frame = 0 
Query:    1 MAVEVACDGATEMLRHAVSLAQSSSVAPTAPVLPPASPASAARPLPAPGSSRSDVGSGGGRDEGXXXXXXXXXXXXXXXRGGRGGKAVRDWALQTLTPLLRHPSGMGAQGGNTIGAGTAALHPPQRKLSAAEKEKSADEIRAIDLSAALGVAEALLQAARD 161
            MAVEVACDGATEMLRHAVSLA SSS APTAPV PP SPASAARPLPAPGSSRSDVGSGGGR EG               RGGRGGKAVRDWAL+TL PLLRHPSGMGAQGGNTIGAGT AL  PQRKLSAAEK+KSA EIRAIDLSAALGVAEALLQAARD
Sbjct: 1227 MAVEVACDGATEMLRHAVSLASSSSAAPTAPVPPPVSPASAARPLPAPGSSRSDVGSGGGRGEGIEEVVKGGGREGGRRRGGRGGKAVRDWALRTLAPLLRHPSGMGAQGGNTIGAGTTALPWPQRKLSAAEKKKSAAEIRAIDLSAALGVAEALLQAARD 1387
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BLAST of mRNA_Ecto-sp13_S_contig16069.4437.1 vs. uniprot
Match: A0A6H5J4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4R7_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.940e-40
Identity = 119/170 (70.00%), Postives = 120/170 (70.59%), Query Frame = 0 
Query:    1 MAVEVACDGATEMLRHAVSLAQSSSVAPTAPVLPPASPASAARPLPAPGSSRSDVGSGGGRDEGXXXXXXXXXXXXXXXRGGRGG---------KAVRDWALQTLTPLLRHPSGMGAQGGNTIGAGTAALHPPQRKLSAAEKEKSADEIRAIDLSAALGVAEALLQAARD 161
            MAVEVACDGATEMLRHAVSLA SSS  PTAPVL                               XXXXXXXXXXXXXXX  GR G         KAVRDWALQTL PLLRHPSGMG QGGNTIGAGTAAL  PQRKLSAAEK+KSADEIRAIDLSAALGVAEALLQAARD
Sbjct:  356 MAVEVACDGATEMLRHAVSLAPSSSAVPTAPVL---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREGXXXXXXXXXKAVRDWALQTLAPLLRHPSGMGTQGGNTIGAGTAALPRPQRKLSAAEKKKSADEIRAIDLSAALGVAEALLQAARD 516
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16069.4437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBB5_ECTSI7.670e-6883.23Essential abundant protein involved in regulation ... [more]
A0A6H5J4R7_9PHAE3.940e-4070.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16069contigEcto-sp13_S_contig16069:174..656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16069.4437.1mRNA_Ecto-sp13_S_contig16069.4437.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16069 148..656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16069.4437.1 ID=prot_Ecto-sp13_S_contig16069.4437.1|Name=mRNA_Ecto-sp13_S_contig16069.4437.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
MAVEVACDGATEMLRHAVSLAQSSSVAPTAPVLPPASPASAARPLPAPGS
SRSDVGSGGGRDEGREEVVKDGGREGGRERGGRGGKAVRDWALQTLTPLL
RHPSGMGAQGGNTIGAGTAALHPPQRKLSAAEKEKSADEIRAIDLSAALG
VAEALLQAARD
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