mRNA_Ecto-sp13_S_contig16066.4435.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE) HSP 1 Score: 556 bits (1432), Expect = 5.280e-194 Identity = 269/276 (97.46%), Postives = 270/276 (97.83%), Query Frame = 1
Query: 1 RRRGGSWNWGNLGRSLIGAVLGPGAVGGEDGGGGGDRASEARTRRGRFRELTPHEMHQTPEGKFSVSVWRKNKQDAEPVEVSVGVYETAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQVC 828
RRRGGSWNWGNLGRSLIGAVLGPGAVG EDGGGGGDRAS A RRGRFRELTPHEMHQTPEGKFSVSVWRKNKQDAEPVEVSVGVY+TAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCY AGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQ C
Sbjct: 270 RRRGGSWNWGNLGRSLIGAVLGPGAVGREDGGGGGDRASVAGARRGRFRELTPHEMHQTPEGKFSVSVWRKNKQDAEPVEVSVGVYDTAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGC 545
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI) HSP 1 Score: 404 bits (1037), Expect = 1.240e-140 Identity = 186/188 (98.94%), Postives = 188/188 (100.00%), Query Frame = 1
Query: 166 MHQTPEGKFSVSVWRKNKQDAEPVEVSVGVYETAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKK 729
MHQTPEGKFSVSVWRKNKQDAEPVEVSVGVY+TAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCS+CYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKK
Sbjct: 1 MHQTPEGKFSVSVWRKNKQDAEPVEVSVGVYDTAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKK 188
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE) HSP 1 Score: 264 bits (675), Expect = 3.550e-78 Identity = 125/229 (54.59%), Postives = 165/229 (72.05%), Query Frame = 1
Query: 145 RELTPHEMHQTPEGK--FSVSVWRKNKQDAEPVEVSVGVYETAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRR-HHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQ 822
RELTPH + + G F+++V++ NKQD P + G + T+YE RAAE+FS P+W EP +S CA C S+F V +RR HHCRNCGRLVC+ CA RFWP+ MLP +Y ++E++VRVC TCY G+ FR+A L GS +GAM A+ TGCVNLR P++ ELPVHCAA+GGN++++ WLV+DRCCP+F+D EK + D SVM AAA SG V++MRYL+FTQ
Sbjct: 525 RELTPHLVEELDGGGGGFTLTVFKYNKQDQVPTPLVCGKFATSYEADRAAETFSSPVWHEPTPNSTCAECQSSFRPVFQRRKHHCRNCGRLVCTTCAWRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLVEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLSFTQ 751
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI) HSP 1 Score: 262 bits (669), Expect = 9.910e-78 Identity = 125/229 (54.59%), Postives = 163/229 (71.18%), Query Frame = 1
Query: 145 RELTPHEMHQTPEGK--FSVSVWRKNKQDAEPVEVSVGVYETAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVL-KRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQ 822
RELTPH + + G F+++V++ NKQD P + G + T+YE RAAE+FS P+W EP +S CA C S F VL +RRHHCRNCGRLVC+ CA RFWP+ MLP +Y ++E++VRVC TCY G+ FR+A L GS +GAM A TGCVNLR P++ ELPVHCAA+GGN++++ WL++DRCCP+F+D EK + D SVM AAA SG V++MRYL FTQ
Sbjct: 455 RELTPHLVEELDGGGGGFTLTVFKYNKQDQVPTPLVCGKFATSYEADRAAEAFSSPVWHEPTPNSTCAECQSVFRPVLQRRRHHCRNCGRLVCTTCALRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLLEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLTFTQ 681
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.910e-64 Identity = 99/188 (52.66%), Postives = 127/188 (67.55%), Query Frame = 1
Query: 247 VGVYETAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYL 810
+GVYET + A ++F+ P Q + CA+C S FG + +RRHHCRNCGR VC ACA+ WP SMLP TY+ E+K R+C TC E FR A L+G + A AA+ GCVNLR PY+IY N LPVHCAA GG++ +LAWL++++ CPLF D + IALG+ R+ SVM AA +GH IMRYL
Sbjct: 10 LGVYETPDAAEEACKAFAVPKKQNA---ALCALCKSYFGMLSRRRHHCRNCGRAVCDACAKTSWPSSMLPFTYSAAKQERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLNGLPVHCAAEGGSMALLAWLLEEKHCPLFKDLSRTIALGNGRKESVMAVAAQNGHTHIMRYL 194
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE) HSP 1 Score: 180 bits (457), Expect = 3.560e-48 Identity = 87/179 (48.60%), Postives = 113/179 (63.13%), Query Frame = 1
Query: 334 RCAVCDSTFGYVLK--------------RRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQVC 828
RCA+C ST V+ +CRNC R+VC C FW R+M+PP Y + ++RVC TC A E FR A L G E AM+A+STGCVNL PYT++H ELPVHCAA+GGN+ +L+WLV++ CP+F D +KK+ + D R L+V+GAAA +G VQ MRYL Q C
Sbjct: 494 RCALCMSTNVSVVHPPGGNNRGNRXXXXXNKNCRNCWRVVCDDCVGTFWARNMVPPRYASERDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCPIFTDSDKKVPIKDLRSLTVLGAAAVNGQVQAMRYLVNQQGC 672
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: A0A7S3YF48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF48_HETAK) HSP 1 Score: 173 bits (439), Expect = 3.710e-48 Identity = 89/189 (47.09%), Postives = 117/189 (61.90%), Query Frame = 1
Query: 247 VGVYETAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRL-SVMGAAAASGHVQIMRYL 810
VGVY++ E AAE++SPPLW++ C C + F +L+ HCRNCGR+VC CA WP MLP TY EKK RVC C A EDFR A G G AA++TG VNLR PYT++ E PVHCAA+GG+L +LAWLVD+R + + K+ L S + S M AA +G++++MR+L
Sbjct: 52 VGVYDSRDEAVAAAEAYSPPLWEQKRGGLGCGNCGAKFA-LLRPEKHCRNCGRVVCRECARAHWPPRMLPATYLDGAGEKKARVCRGCQWAMEDFRAALRRGDAPGVRAAYATGVVNLRTPYTVHGGEYPVHCAAAGGSLPLLAWLVDERGAFVRDPQSKQRPLFASDGITSCMSLAAVNGNLEMMRWL 239
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: D7FYF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF5_ECTSI) HSP 1 Score: 160 bits (404), Expect = 4.660e-41 Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 334 RCAVCDSTF--------------GYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAAS 783
RCA+C ST G +CRNC R+VC C FW R+M+PP Y + ++RVC TC A E FR A L G E AM+A+STGCVNL PYT++H ELPVHCAA+GGN+ +L+WLV++ C +F D +KK+ + D R L+V+GAAA +
Sbjct: 492 RCALCMSTNVSAVHPPGGNTRRNGNSSSSDKNCRNCWRVVCDDCIGTFWARNMVPPRYASEGDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCSIFTDSDKKVPIRDLRSLTVLGAAAVN 655
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: A0A7S4QY11_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY11_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.930e-28 Identity = 71/197 (36.04%), Postives = 104/197 (52.79%), Query Frame = 1
Query: 256 YETAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNEL--PVHCAASGGNLNILAWLVDDRCCPLFL---------DREKKIAL-GDSRRLSVMGAAAASGHVQIMRYL 810
+ T E + +A + +PP + CA+C+ F V +R HCRNCG +C++C++ W +P TYN+ +EK V+VC TC+ FR+ L G E A++ F TG +NLR + E PVHCAA GGN+ +L WLVD CP+ R+ AL S+ +V+ A + V I+RYL
Sbjct: 381 FHTEREARESAYANAPPKMTPFAESPHCALCNGKFA-VFRRPSHCRNCGVCICASCSK-TWSHKSIPETYNMK-NEKNVKVCKTCHFLSYKFRQTLLDGHYEEAVSLFHTGNINLRCQFYSTDGEASYPVHCAAEGGNIQLLQWLVDIHFCPIKQAGSGSKGKKSRKASTALIQTSKGRTVLDIAMTNQRVDILRYL 574
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Match: A0A6S8XUE4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XUE4_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.140e-28 Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 1
Query: 256 YETAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNE---LPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLS 759
++T +E + +A + +P + C +CDS F V +R HCRNCG +CS+C+ W + +P TYN+ +E V+VC +C FR++ L + E A+ ++TG VNLR P+ E LP+HCAA GG+L++L WLVD CP+ KKI G++R S
Sbjct: 470 FQTEHEARESAYANAPAKMIPFDEARSCFICDSKFA-VFRRASHCRNCGVCICSSCSV-SWSKVCIPETYNIK-NENVVKVCKSCSSLSRMFRRSLLDANCEDALTIYNTGNVNLRCPFMTSKGEEAMLPIHCAAEGGSLDLLRWLVDIHFCPI-----KKIRTGNNRNKS 632 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16066.4435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16066.4435.1 >prot_Ecto-sp13_S_contig16066.4435.1 ID=prot_Ecto-sp13_S_contig16066.4435.1|Name=mRNA_Ecto-sp13_S_contig16066.4435.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp RRRGGSWNWGNLGRSLIGAVLGPGAVGGEDGGGGGDRASEARTRRGRFREback to top mRNA from alignment at Ecto-sp13_S_contig16066:7..3999- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16066.4435.1 ID=mRNA_Ecto-sp13_S_contig16066.4435.1|Name=mRNA_Ecto-sp13_S_contig16066.4435.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3993bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16066:7..3999- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16066:7..3999- >mRNA_Ecto-sp13_S_contig16066.4435.1 ID=mRNA_Ecto-sp13_S_contig16066.4435.1|Name=mRNA_Ecto-sp13_S_contig16066.4435.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=831bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16066:7..3999- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |