prot_Ecto-sp13_S_contig16061.4433.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16061.4433.1
Unique Nameprot_Ecto-sp13_S_contig16061.4433.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length162
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16061.4433.1 vs. uniprot
Match: D8LRI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI0_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.910e-31
Identity = 78/153 (50.98%), Postives = 91/153 (59.48%), Query Frame = 0 
Query:    1 MVLIVPGVVWTGIMVTKFGIPKVLVWKALERCIRPDENRELETGG-DEEAGDDGRDVPELGQAVHNDEQQEEQEPLVGATNRTLGILMRILSRVFNTGSTMPRTLRMIYRLWCSRRWHQGEGRAPT-----LQSQSFTGYNSLDPWDSG-GKG 146
            MV+IV G VW GIMVTK  I KVLVWKALERC+RPDENRE +T   DEEA DDG DVPEL Q V +DE++E+Q+P++GAT RTLG L                               QG+GR PT     LQ +S TG NSLD    G G+G
Sbjct:    1 MVIIVSGAVWAGIMVTKCVISKVLVWKALERCVRPDENREHKTNSSDEEARDDGEDVPELAQEV-DDEEEEDQQPVIGATKRTLGTLK------------------------------QGDGREPTSRVDRLQPESSTGDNSLDSRSDGSGEG 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16061.4433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRI0_ECTSI4.910e-3150.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16061contigEcto-sp13_S_contig16061:548..1805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16061.4433.1mRNA_Ecto-sp13_S_contig16061.4433.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16061 548..1818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16061.4433.1 ID=prot_Ecto-sp13_S_contig16061.4433.1|Name=mRNA_Ecto-sp13_S_contig16061.4433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp
MVLIVPGVVWTGIMVTKFGIPKVLVWKALERCIRPDENRELETGGDEEAG
DDGRDVPELGQAVHNDEQQEEQEPLVGATNRTLGILMRILSRVFNTGSTM
PRTLRMIYRLWCSRRWHQGEGRAPTLQSQSFTGYNSLDPWDSGGKGVEVT
GYFVALYAHYV*
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