prot_Ecto-sp13_S_contig1606.4429.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1606.4429.1
Unique Nameprot_Ecto-sp13_S_contig1606.4429.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length294
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1606.4429.1 vs. uniprot
Match: D7G5A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A1_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 1.640e-117
Identity = 271/293 (92.49%), Postives = 276/293 (94.20%), Query Frame = 0 
Query:    1 MRSTSYPRVPRALFCSALLLSQYAVVDANNWATGRASSSRSSTLAVMQPGGRNRPIRDWKAIKREAEEKRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXQLDTVSAESLDMEEHTAEDMGIRLAKVVVIATAGVYGVKKVVAFAKAFAKVRKDRKSSGEEGGRVADGLSAVAATKDAKDKGDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEMLAGMGKAADDMKKRAKGSFENLKRGLGEATGRGQEDVQGAGEGDSPPGLPKGVDGGKVDVSYV 293
            MRSTSYPRVPRALFCSALLLSQ+AVVDANNWATGRASSSRSSTLAVMQPGGRNRPIRDWKAIKREAEEKRKNXXXXXXXXXXXXXXXXXXXXXXXXXXX L+TVSAE+LDMEE TAED+GI LAKVVVIATAGVYG+KKVVAFAKAF K RKDRKSSGEEGG VADGLSAVAATKDAKDK    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEMLAGMGKAA DMKKRAK S ENLK GLGEATGRG EDVQGAGEGDSPP LPKGV GGKVDVSYV
Sbjct:    1 MRSTSYPRVPRALFCSALLLSQHAVVDANNWATGRASSSRSSTLAVMQPGGRNRPIRDWKAIKREAEEKRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETVSAEALDMEEDTAEDIGIMLAKVVVIATAGVYGIKKVVAFAKAFTKARKDRKSSGEEGGGVADGLSAVAATKDAKDKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEMLAGMGKAAKDMKKRAKDSLENLKSGLGEATGRGDEDVQGAGEGDSPPSLPKGVAGGKVDVSYV 293
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1606.4429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5A1_ECTSI1.640e-11792.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..293
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.673

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1606contigEcto-sp13_S_contig1606:523..3928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1606.4429.1mRNA_Ecto-sp13_S_contig1606.4429.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1606 154..5460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1606.4429.1 ID=prot_Ecto-sp13_S_contig1606.4429.1|Name=mRNA_Ecto-sp13_S_contig1606.4429.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
MRSTSYPRVPRALFCSALLLSQYAVVDANNWATGRASSSRSSTLAVMQPG
GRNRPIRDWKAIKREAEEKRKNKAEEKADEAVEAAQETLERVVDEPVDQQ
LDTVSAESLDMEEHTAEDMGIRLAKVVVIATAGVYGVKKVVAFAKAFAKV
RKDRKSSGEEGGRVADGLSAVAATKDAKDKGDDNDNGGGDAEVASGGNKE
GDAAAEEEEDETTDGFVTADEEEEDSASEMLAGMGKAADDMKKRAKGSFE
NLKRGLGEATGRGQEDVQGAGEGDSPPGLPKGVDGGKVDVSYV*
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