mRNA_Ecto-sp13_S_contig16054.4426.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16054.4426.1
Unique NamemRNA_Ecto-sp13_S_contig16054.4426.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D7FL08_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FL08_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 6.020e-91
Identity = 167/271 (61.62%), Postives = 184/271 (67.90%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGVGGAPGHRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLG-VHLLVL*QR--RRLHREEHRGGRGVPTLYFTLPQRCFVPC-----GNGYEYDATLFTGQVA*RA-RGVKGEYSTIRPRNDWCLAVAVK 786
            VNKNAEGLRDRVVEHEGKK LTVEGYGSLETA YA LIKDL GQIRQNIKSPELADWFRPG STTTETDEVCAAA AMASLQAYFEY MCL CGIPSVTLMGTVEDWKLLREKIERMLEFEV GNPE KVME  V  +R V    G             V     +L    + GS ++   G V       +    + +    GG   P +  +      + C      NG+EYDATLFTGQVA +A +G +G + T+RPRNDWCLAVAVK
Sbjct:  132 VNKNAEGLRDRVVEHEGKKGLTVEGYGSLETADYAKLIKDLLGQIRQNIKSPELADWFRPGFSTTTETDEVCAAAAAMASLQAYFEYTMCLACGIPSVTLMGTVEDWKLLREKIERMLEFEVLGNPEGKVMELWVGYLRKV--CDGFVESAEHPDSAATVDFWDKVLSHK-NRGSGMNYTTGWVSAFSCFDKDGNFIGKNMSMGGE-FPLIRDSALCHNVISCPVTIDDNGHEYDATLFTGQVAFKAEQGAEGGHPTVRPRNDWCLAVAVK 398          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: A0A6H5KCJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ8_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 1.080e-82
Identity = 160/272 (58.82%), Postives = 172/272 (63.24%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGVGGA-------PGHRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHRGGRG--VPTLYFTLPQRCFVPCGNGYEYDATLFTGQVA*RA-RGVKGEYSTIRPRNDWCLAVAVK 786
            VNKNAEGLRDRVVEHEGKK+LTV GYGSLETA YA LIKDL GQIRQNIKSPEL   F PG STTTETDEVCAAATAMASLQ  F Y+MCLRCGIPSV LMGTVEDWKLLREKIERMLEFEV  NPE KVME  V  +R V          P          +V +V          FS      + +G             +    GG    V +L+  +         NGY YDATL TGQVA RA RG KG Y T+ PRNDWCLAVAVK
Sbjct:  113 VNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADYARLIKDLLGQIRQNIKSPEL---FLPGFSTTTETDEVCAAATAMASLQECFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVGWV--------SAFSCFDKDGNFIG-------------KNTGEGGEFPLVTSLFHNVVSCPVAIDDNGYGYDATLLTGQVAYRAERGAKGAYPTMCPRNDWCLAVAVK 360          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D7FL09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL09_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 8.000e-75
Identity = 121/141 (85.82%), Postives = 125/141 (88.65%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV 423
            VNKNAEGLRDRVVEHEGKK LTVEGYGSLETA YA LIKDL GQIRQNIKSPELADWFRPG ST+TETDEVCAAATAMASLQAYFE+ MCL C IPSVTLMGTVEDW+LLREKIERMLEFEV  NPE KVME  V  +R V
Sbjct:   29 VNKNAEGLRDRVVEHEGKKGLTVEGYGSLETADYAKLIKDLLGQIRQNIKSPELADWFRPGFSTSTETDEVCAAATAMASLQAYFEHTMCLACSIPSVTLMGTVEDWELLREKIERMLEFEVLDNPEGKVMEVWVGYLRKV 169          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D8LB67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB67_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 1.340e-74
Identity = 149/295 (50.51%), Postives = 178/295 (60.34%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV----------GGAPG----------HRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHRG----GRGVPTL--------YFTLPQRCFVPCGNGYEYDATLFTGQVA*RA-RGVKGEYSTIRPRNDWCLAVAVK 786
            VNKNAEGLRDR+VEHEGKKEL V   G+L TA Y  +I+DL G IRQNIKSPE ADWFRPG STTTE DEVCAAATAMASLQAYFEY M  RCGIPSVTLMGTV DWKLLREKIER+LEFEV GNP+ KVM+  V  +R V           G+P           H  +G     V+Y+      +      GS+V+  LG       + + + R+E+R       G P +          + P +  +    G EYD TLF GQ    A R  +  + T+RPR+DWC+AVAVK
Sbjct:   29 VNKNAEGLRDRIVEHEGKKELRVSSDGTLHTADYPRMIRDLLGLIRQNIKSPEFADWFRPGFSTTTEKDEVCAAATAMASLQAYFEYTMMYRCGIPSVTLMGTVGDWKLLREKIERLLEFEVDGNPQGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVLTHEPEG---SGVSYIT---GWVSAFTCFGSDVNF-LGK------RTKFMSRDENRNIVEKDWGFPMIPDQEICIDVVSCPVK-IIDATVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVK 309          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: A0A6H5K056_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K056_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 7.820e-69
Identity = 143/268 (53.36%), Postives = 153/268 (57.09%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGVGGAPGHRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHRGGRGVPTLYFTLPQRCFVPC-----GNGYEYDATLFTGQVA*RA-RGVKGEYSTIRPRNDWCLAVAVK 786
            VNKNAEGLRDRVVEHEGKK+LTV G                     QNIK PELADWF PG STTTETDEVCAAATAMASLQ YF Y+MCLRCGIPSV LMGTVEDWKLLREKIERMLEFEV  NPE KVME  V  +R V    G             V     +      +         V       +      ++ G  G   L  +L     V C      NGY YDATL TGQVA RA RG K  Y T+ PRNDWCLAVAVK
Sbjct:  117 VNKNAEGLRDRVVEHEGKKKLTVYG---------------------QNIKPPELADWFLPGFSTTTETDEVCAAATAMASLQEYFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKV--CDGFVESAEHPNSAATVDFWDKVFSHRHFVSGVTFTTGWVSAFSCFDKDGNFIGKNTGKGGEFPLVTSLCHNV-VSCPVAIDDNGYGYDATLVTGQVAYRAERGAKAGYPTMCPRNDWCLAVAVK 360          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: A0A6H5KQX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX2_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.240e-68
Identity = 142/286 (49.65%), Postives = 169/286 (59.09%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLET-AHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVR----GVGGAPGHRGDG*LL-------------GQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHR----GGRGVPTLYFTLPQRCFVPCGNGYEYDATLFTGQVA*RAR--GVKGEYSTIRPRNDWCLAVAVK 786
            VNKNAEGLRDR+V+HEGKK L V   G+L T A Y  +I+DL G IRQNIKSPELADWFRPG STTTE DEVCAAATAMASLQ YFE++M   CGIPSVTL GTV DWKLLREK+ER+LEFEV GNPE +VM+  V  +R    G   +  H G    L               V Y+    S      S G  +  R    L    +  ++  +E      GGR +     + P +  V   +  EYD TLF GQ    A   G  G + T+RPR+DWC+AVAVK
Sbjct:   46 VNKNAEGLRDRIVQHEGKKALIVVSDGTLRTTADYPRMIRDLLGLIRQNIKSPELADWFRPGFSTTTERDEVCAAATAMASLQNYFEFRMRRGCGIPSVTLRGTVRDWKLLREKVERLLEFEVDGNPEGEVMQIWVGYLRKVCDGFVESAEHPGSPETLEFWDRVLTDKRGGSGVNYITGWVSAFTCFNSDGKFLGKR--TKLRSFDENLKIVEKEVEFPIIGGRDICHNVVSCPVK-IVDVSDRREYDGTLFAGQTVCEAERPGATG-HPTVRPRSDWCMAVAVK 327          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D7G2F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F2_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.540e-64
Identity = 137/308 (44.48%), Postives = 166/308 (53.90%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV---------------------------GGAPG-------------HRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHRGGRGVPTLYFTLPQRCFVPC-----GNGYEYDATLFTGQVA*RAR-GVKGEYSTIRPRNDWCLAVAVK 786
            VNKNAE LRDR+V+HEGKK L VEG G+L +  Y  LI+++  +IR+NIK+PELADWF+PG +TTT+TDEV AAATAMASLQAYF Y++   CG+PSVTLMGTV+DWKLLR K+ER+L+FEV  NPE  VME  V  +R V                           GG  G                DG  +G+ T +P   S         SN  +                          P +  +      V C      NG EYD+TLF GQVA  AR G +G Y TIRPRNDWCLAV  K
Sbjct:  253 VNKNAESLRDRIVDHEGKKVLRVEGGGNLFSLDYPALIREMLAKIRENIKTPELADWFKPGFTTTTDTDEVAAAATAMASLQAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKVCDGFVESAEHPDSTETLQFWDKVVSHIGGGSGVSYITGWLSAFACFNKDGKFMGRNTEIPGTGSYRDTAVPDKSNECE-------------------------YPLIETSQICHNVVSCPVKINDNGVEYDSTLFVGQVALEARNGGEGGYPTIRPRNDWCLAVPAK 535          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D8LQ89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ89_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 6.160e-63
Identity = 107/142 (75.35%), Postives = 115/142 (80.99%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPE-DKVME*GVRRVRGV 423
            VNKNAEGLRDR+V+HEGKKEL V   G+L TA Y  +I+DL G IRQNIKSPELADWFRPG STTTE DEVCAAATAMASLQ YFEY     CGIPSVTL GTV DWKLLREKIER+LEFEV GNPE DKVM+  V  +R V
Sbjct:   29 VNKNAEGLRDRIVQHEGKKELVVASDGTLRTADYPRMIRDLLGLIRQNIKSPELADWFRPGFSTTTERDEVCAAATAMASLQGYFEYSFMCGCGIPSVTLRGTVGDWKLLREKIERLLEFEVDGNPEEDKVMQIWVGYLRKV 170          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: A0A6H5L0H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H3_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.340e-61
Identity = 135/299 (45.15%), Postives = 167/299 (55.85%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV--------------------GGAPGHRGDG*LLGQVT-YVPLR*SLL*RLFSLGSNVHD-RLGVHLLVL*QRRRLHREEHRGGRGV---------PTLYFTLPQRCFVPC-----GNGYEYDATLFTGQVA*RAR-GVKGEYSTIRPRNDWCLAVAVK 786
            VNKNAE LRDR+V HEGKK L VEG G+L +A    LI+++ G+IRQN+K PELADWF+PG +TT  TDEV AAATA+ SLQAYF Y++ L CG+PSVTLMGTV+DWKLLR K+ER+L+FEV+ NPE+ VME  V  +R V                         H G G  +  +T ++P           +G N +  R+G++               RGG  V         P +         V C      NG EYD TLF GQVA  AR G +G Y   RPRN WCLAV  K
Sbjct:  202 VNKNAESLRDRIVNHEGKKVLRVEGGGNLFSAETPVLIREMLGKIRQNVKMPELADWFKPGFTTTANTDEVAAAATAITSLQAYFSYEIHLECGLPSVTLMGTVQDWKLLRAKVERLLDFEVKDNPEEDVMEVWVGYLREVCDGFVESAEHPDSTETLQVWDKVVPHIGGGSGVSYITGWLPAFACFNKDGKFMGRNTNKARIGLN---------------RGGNAVRDESGECKYPLIDTGEICHNAVSCPVKINDNGVEYDGTLFVGQVALEARNGGEGGYP--RPRNGWCLAVPAK 483          
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D7G2F1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F1_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 4.320e-55
Identity = 93/141 (65.96%), Postives = 114/141 (80.85%), Query Frame = 1
Query:    1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV 423
            VNKNAE LRDR+V+HEGKK L VEG G+L +  Y  LI+++  +IR+NIK+PELADWF+PG +TTT+TDEV AAATAMASLQAYF Y++   CG+PSVTLMGTV+DWKLLR K+ER+L+FEV  NPE  VME  V  +R V
Sbjct:   68 VNKNAESLRDRIVDHEGKKALGVEGGGNLFSLDYPALIREMLAKIRENIKTPELADWFKPGFTTTTDTDEVAAAATAMASLQAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKV 208          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL08_ECTSI6.020e-9161.62Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KCJ8_9PHAE1.080e-8258.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL09_ECTSI8.000e-7585.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LB67_ECTSI1.340e-7450.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K056_9PHAE7.820e-6953.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQX2_9PHAE1.240e-6849.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2F2_ECTSI1.540e-6444.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQ89_ECTSI6.160e-6375.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0H3_9PHAE3.340e-6145.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2F1_ECTSI4.320e-5565.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16054contigEcto-sp13_S_contig16054:2..1996 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score96.3
Seed ortholog evalue9e-18
Seed eggNOG ortholog2880.D7FL10
Model size786
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Domain of unknown function (DUF4419)
EggNOG OGs29GQM@1,2RPX4@2759
Cds size309
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462847.6898215-UTR-Ecto-sp13_S_contig16054:1..4761681462847.6898215-UTR-Ecto-sp13_S_contig16054:1..476Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16054 2..476 +
1681462847.7326593-UTR-Ecto-sp13_S_contig16054:1994..19961681462847.7326593-UTR-Ecto-sp13_S_contig16054:1994..1996Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16054 1995..1996 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462847.7050602-CDS-Ecto-sp13_S_contig16054:476..4941681462847.7050602-CDS-Ecto-sp13_S_contig16054:476..494Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16054 477..494 +
1681462847.722088-CDS-Ecto-sp13_S_contig16054:1703..19941681462847.722088-CDS-Ecto-sp13_S_contig16054:1703..1994Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16054 1704..1994 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16054.4426.1prot_Ecto-sp13_S_contig16054.4426.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16054 477..1994 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16054.4426.1

>prot_Ecto-sp13_S_contig16054.4426.1 ID=prot_Ecto-sp13_S_contig16054.4426.1|Name=mRNA_Ecto-sp13_S_contig16054.4426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MCLYAEVFSDDYFRSGVTFTTGWVSTFSCFDKDGDFIGKNTEEGGEFPLY
TSLCHNVVSCPVAMDMSMTPPCLQGRWPKGHEVSRGNIRPFVRATTGVWP
WR*
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mRNA from alignment at Ecto-sp13_S_contig16054:2..1996+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16054.4426.1 ID=mRNA_Ecto-sp13_S_contig16054.4426.1|Name=mRNA_Ecto-sp13_S_contig16054.4426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1995bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16054:2..1996+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCAACAAGAACGCCGAGGGTCTGCGCGACAGGGTGGTTGAGCATGAGGG CAAGAAGGAGCTGACAGTGGAAGGGTACGGGTCCTTGGAAACAGCCCACT ATGCGACACTGATCAAGGATCTCCGAGGACAAATCAGGCAGAACATCAAG TCCCCCGAGCTGGCGGACTGGTTCCGCCCTGGGCTCTCTACTACTACGGA GACGGACGAGGTGTGCGCGGCGGCAACAGCTATGGCCAGCCTCCAGGCTT ACTTCGAGTATAAAATGTGCCTCAGGTGCGGCATTCCGTCGGTGACCCTG ATGGGCACAGTCGAGGACTGGAAGCTGCTGCGGGAGAAGATCGAGCGTAT GCTTGAGTTCGAGGTGCAGGGCAACCCGGAGGACAAGGTCATGGAGTAAG GTGTGCGACGGGTTCGTGGAGTCGGCGGAGCACCCGGACATCGCGGCGAC GGTTGACTTCTGGGACAAGTTACATATGTGCCTTTACGCTGAAGTAGAGT GGGTGCACAACACACTTCACGGGCGCGAATAAATGTCGTTTATCGTTTCT CTTTGGAATTGCCTTGATTTACACATTCTATGGCCTAAAGAGGGAGGCTT GTTCCCCGTGCCACACGTTCCACACGGCTTGTTGCCTCCGCCGTATCCTA ATGTCTCCTCTCCCAAAACACACGCAATATCTTCCTCCGAATACGACCAG ACGGGACGAAACTGTTGTACACTATGGCAGTCTCGTTCTTAGCCTCTCAA TGGTACACACAAACATTCAGAAAACACCCCGTGCTGTAGGCCATAAGCAC TACATGGCAAAGCTGGCTCCAACTCCGAGTCACACAAATATTTAAGGGGG GCGTCTCTAACAAGGGAGCCCTCCCGTCGCAACGTTTGCCGTATACGCCG CCTTCGAGAGCAACGGGGTGGGTGGGCTGGAGAAAACTACGCGAACTTCA ACGTTGCTCGCTGCTGATCTGCTGTGCCGCGCGACTCTCAAGAGTGGGCT GCGTGCTATACACTGTGTATTCCTCTCCTCAGCACGTTGCCCTTGGACCC TGTGGACACGTGTCTGTCAAACTCTTGCGGCAGGAGCAGCGAGGCAGTAA AATGAGAACGCCTGTGAGACCTTCCTCTTTTTGGGACCCCAGAGAACCGA ACCGAGGCATCCCAAACAACAAGTCTCCCTGGCGGACAACAAGAACCCAA AATTACTCGCACACCGGGGAGATGTTCAGAATTTTCCTTTCACAACAACC TCCAGTGTATTTGAATTCGTGGACAAACGTACTCTGTGCTTCTGTAGGTG GGTATGCCGCGATGAACATATCTATTTGGCGGGTCAGACTGTTCCGTCCT CAGTCCACAAGAGACGCTCGACTTACATGCCGAACGGGTCCGGAGACAAC AAACGTCAAAACCGGGTCGTGGTCAACTTTCTTGTTTCATCACCTCCGTT GAACACAGGTTGCTATGCAGAGCTGTGTTTCTCAACCCGATATTGCTAGT GTCCCTGAAACTTTGAGGGTGGTTTCTTGACGGAATTTCAAATGCGGTGC TTATTGACTGCAATTGTAGCACTCCGATGATTCATGTGCAGCGGCAAATG CACCTCGACTATTCGCCTCTTGAGATGTACATTACGCACACTGCGTTGTC ATTCTCTCAAAACCGCAGTCAGTCGTGAACGCGCTTCGGTTGTTTGTTGC AGGTCTTCTCTGACGATTATTTTCGCTCGGGAGTAACGTTCACGACAGGC TGGGTGTCCACCTTCTCGTGCTTTGACAAAGACGGCGACTTCATCGGGAA GAACACAGAGGAGGGCGGGGAGTTCCCACTCTATACTTCACTTTGCCACA ACGTTGTTTCGTGCCCTGTGGCAATGGATATGAGTATGACGCCACCTTGT TTACAGGGCAGGTGGCCTAAAGGGCACGAGGTGTCAAGGGGGAATATTCG ACCATTCGTCCGCGCAACGACTGGTGTCTGGCCGTGGCGGTGAAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16054:2..1996+

>mRNA_Ecto-sp13_S_contig16054.4426.1 ID=mRNA_Ecto-sp13_S_contig16054.4426.1|Name=mRNA_Ecto-sp13_S_contig16054.4426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=309bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16054:2..1996+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGCCTTTACGCTGAAGTCTTCTCTGACGATTATTTTCGCTCGGGAGT
AACGTTCACGACAGGCTGGGTGTCCACCTTCTCGTGCTTTGACAAAGACG
GCGACTTCATCGGGAAGAACACAGAGGAGGGCGGGGAGTTCCCACTCTAT
ACTTCACTTTGCCACAACGTTGTTTCGTGCCCTGTGGCAATGGATATGAG
TATGACGCCACCTTGTTTACAGGGCAGGTGGCCTAAAGGGCACGAGGTGT
CAAGGGGGAATATTCGACCATTCGTCCGCGCAACGACTGGTGTCTGGCCG
TGGCGGTGA
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