mRNA_Ecto-sp13_S_contig16054.4426.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D7FL08_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FL08_ECTSI) HSP 1 Score: 283 bits (724), Expect = 6.020e-91 Identity = 167/271 (61.62%), Postives = 184/271 (67.90%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGVGGAPGHRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLG-VHLLVL*QR--RRLHREEHRGGRGVPTLYFTLPQRCFVPC-----GNGYEYDATLFTGQVA*RA-RGVKGEYSTIRPRNDWCLAVAVK 786
VNKNAEGLRDRVVEHEGKK LTVEGYGSLETA YA LIKDL GQIRQNIKSPELADWFRPG STTTETDEVCAAA AMASLQAYFEY MCL CGIPSVTLMGTVEDWKLLREKIERMLEFEV GNPE KVME V +R V G V +L + GS ++ G V + + + GG P + + + C NG+EYDATLFTGQVA +A +G +G + T+RPRNDWCLAVAVK
Sbjct: 132 VNKNAEGLRDRVVEHEGKKGLTVEGYGSLETADYAKLIKDLLGQIRQNIKSPELADWFRPGFSTTTETDEVCAAAAAMASLQAYFEYTMCLACGIPSVTLMGTVEDWKLLREKIERMLEFEVLGNPEGKVMELWVGYLRKV--CDGFVESAEHPDSAATVDFWDKVLSHK-NRGSGMNYTTGWVSAFSCFDKDGNFIGKNMSMGGE-FPLIRDSALCHNVISCPVTIDDNGHEYDATLFTGQVAFKAEQGAEGGHPTVRPRNDWCLAVAVK 398
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: A0A6H5KCJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ8_9PHAE) HSP 1 Score: 261 bits (666), Expect = 1.080e-82 Identity = 160/272 (58.82%), Postives = 172/272 (63.24%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGVGGA-------PGHRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHRGGRG--VPTLYFTLPQRCFVPCGNGYEYDATLFTGQVA*RA-RGVKGEYSTIRPRNDWCLAVAVK 786
VNKNAEGLRDRVVEHEGKK+LTV GYGSLETA YA LIKDL GQIRQNIKSPEL F PG STTTETDEVCAAATAMASLQ F Y+MCLRCGIPSV LMGTVEDWKLLREKIERMLEFEV NPE KVME V +R V P +V +V FS + +G + GG V +L+ + NGY YDATL TGQVA RA RG KG Y T+ PRNDWCLAVAVK
Sbjct: 113 VNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADYARLIKDLLGQIRQNIKSPEL---FLPGFSTTTETDEVCAAATAMASLQECFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVGWV--------SAFSCFDKDGNFIG-------------KNTGEGGEFPLVTSLFHNVVSCPVAIDDNGYGYDATLLTGQVAYRAERGAKGAYPTMCPRNDWCLAVAVK 360
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D7FL09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL09_ECTSI) HSP 1 Score: 235 bits (599), Expect = 8.000e-75 Identity = 121/141 (85.82%), Postives = 125/141 (88.65%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV 423
VNKNAEGLRDRVVEHEGKK LTVEGYGSLETA YA LIKDL GQIRQNIKSPELADWFRPG ST+TETDEVCAAATAMASLQAYFE+ MCL C IPSVTLMGTVEDW+LLREKIERMLEFEV NPE KVME V +R V
Sbjct: 29 VNKNAEGLRDRVVEHEGKKGLTVEGYGSLETADYAKLIKDLLGQIRQNIKSPELADWFRPGFSTSTETDEVCAAATAMASLQAYFEHTMCLACSIPSVTLMGTVEDWELLREKIERMLEFEVLDNPEGKVMEVWVGYLRKV 169
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D8LB67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB67_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.340e-74 Identity = 149/295 (50.51%), Postives = 178/295 (60.34%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV----------GGAPG----------HRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHRG----GRGVPTL--------YFTLPQRCFVPCGNGYEYDATLFTGQVA*RA-RGVKGEYSTIRPRNDWCLAVAVK 786
VNKNAEGLRDR+VEHEGKKEL V G+L TA Y +I+DL G IRQNIKSPE ADWFRPG STTTE DEVCAAATAMASLQAYFEY M RCGIPSVTLMGTV DWKLLREKIER+LEFEV GNP+ KVM+ V +R V G+P H +G V+Y+ + GS+V+ LG + + + R+E+R G P + + P + + G EYD TLF GQ A R + + T+RPR+DWC+AVAVK
Sbjct: 29 VNKNAEGLRDRIVEHEGKKELRVSSDGTLHTADYPRMIRDLLGLIRQNIKSPEFADWFRPGFSTTTEKDEVCAAATAMASLQAYFEYTMMYRCGIPSVTLMGTVGDWKLLREKIERLLEFEVDGNPQGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVLTHEPEG---SGVSYIT---GWVSAFTCFGSDVNF-LGK------RTKFMSRDENRNIVEKDWGFPMIPDQEICIDVVSCPVK-IIDATVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVK 309
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: A0A6H5K056_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K056_9PHAE) HSP 1 Score: 225 bits (574), Expect = 7.820e-69 Identity = 143/268 (53.36%), Postives = 153/268 (57.09%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGVGGAPGHRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHRGGRGVPTLYFTLPQRCFVPC-----GNGYEYDATLFTGQVA*RA-RGVKGEYSTIRPRNDWCLAVAVK 786
VNKNAEGLRDRVVEHEGKK+LTV G QNIK PELADWF PG STTTETDEVCAAATAMASLQ YF Y+MCLRCGIPSV LMGTVEDWKLLREKIERMLEFEV NPE KVME V +R V G V + + V + ++ G G L +L V C NGY YDATL TGQVA RA RG K Y T+ PRNDWCLAVAVK
Sbjct: 117 VNKNAEGLRDRVVEHEGKKKLTVYG---------------------QNIKPPELADWFLPGFSTTTETDEVCAAATAMASLQEYFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKV--CDGFVESAEHPNSAATVDFWDKVFSHRHFVSGVTFTTGWVSAFSCFDKDGNFIGKNTGKGGEFPLVTSLCHNV-VSCPVAIDDNGYGYDATLVTGQVAYRAERGAKAGYPTMCPRNDWCLAVAVK 360
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: A0A6H5KQX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX2_9PHAE) HSP 1 Score: 224 bits (570), Expect = 1.240e-68 Identity = 142/286 (49.65%), Postives = 169/286 (59.09%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLET-AHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVR----GVGGAPGHRGDG*LL-------------GQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHR----GGRGVPTLYFTLPQRCFVPCGNGYEYDATLFTGQVA*RAR--GVKGEYSTIRPRNDWCLAVAVK 786
VNKNAEGLRDR+V+HEGKK L V G+L T A Y +I+DL G IRQNIKSPELADWFRPG STTTE DEVCAAATAMASLQ YFE++M CGIPSVTL GTV DWKLLREK+ER+LEFEV GNPE +VM+ V +R G + H G L V Y+ S S G + R L + ++ +E GGR + + P + V + EYD TLF GQ A G G + T+RPR+DWC+AVAVK
Sbjct: 46 VNKNAEGLRDRIVQHEGKKALIVVSDGTLRTTADYPRMIRDLLGLIRQNIKSPELADWFRPGFSTTTERDEVCAAATAMASLQNYFEFRMRRGCGIPSVTLRGTVRDWKLLREKVERLLEFEVDGNPEGEVMQIWVGYLRKVCDGFVESAEHPGSPETLEFWDRVLTDKRGGSGVNYITGWVSAFTCFNSDGKFLGKR--TKLRSFDENLKIVEKEVEFPIIGGRDICHNVVSCPVK-IVDVSDRREYDGTLFAGQTVCEAERPGATG-HPTVRPRSDWCMAVAVK 327
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D7G2F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F2_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.540e-64 Identity = 137/308 (44.48%), Postives = 166/308 (53.90%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV---------------------------GGAPG-------------HRGDG*LLGQVTYVPLR*SLL*RLFSLGSNVHDRLGVHLLVL*QRRRLHREEHRGGRGVPTLYFTLPQRCFVPC-----GNGYEYDATLFTGQVA*RAR-GVKGEYSTIRPRNDWCLAVAVK 786
VNKNAE LRDR+V+HEGKK L VEG G+L + Y LI+++ +IR+NIK+PELADWF+PG +TTT+TDEV AAATAMASLQAYF Y++ CG+PSVTLMGTV+DWKLLR K+ER+L+FEV NPE VME V +R V GG G DG +G+ T +P S SN + P + + V C NG EYD+TLF GQVA AR G +G Y TIRPRNDWCLAV K
Sbjct: 253 VNKNAESLRDRIVDHEGKKVLRVEGGGNLFSLDYPALIREMLAKIRENIKTPELADWFKPGFTTTTDTDEVAAAATAMASLQAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKVCDGFVESAEHPDSTETLQFWDKVVSHIGGGSGVSYITGWLSAFACFNKDGKFMGRNTEIPGTGSYRDTAVPDKSNECE-------------------------YPLIETSQICHNVVSCPVKINDNGVEYDSTLFVGQVALEARNGGEGGYPTIRPRNDWCLAVPAK 535
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D8LQ89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ89_ECTSI) HSP 1 Score: 206 bits (524), Expect = 6.160e-63 Identity = 107/142 (75.35%), Postives = 115/142 (80.99%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPE-DKVME*GVRRVRGV 423
VNKNAEGLRDR+V+HEGKKEL V G+L TA Y +I+DL G IRQNIKSPELADWFRPG STTTE DEVCAAATAMASLQ YFEY CGIPSVTL GTV DWKLLREKIER+LEFEV GNPE DKVM+ V +R V
Sbjct: 29 VNKNAEGLRDRIVQHEGKKELVVASDGTLRTADYPRMIRDLLGLIRQNIKSPELADWFRPGFSTTTERDEVCAAATAMASLQGYFEYSFMCGCGIPSVTLRGTVGDWKLLREKIERLLEFEVDGNPEEDKVMQIWVGYLRKV 170
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: A0A6H5L0H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H3_9PHAE) HSP 1 Score: 210 bits (534), Expect = 3.340e-61 Identity = 135/299 (45.15%), Postives = 167/299 (55.85%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV--------------------GGAPGHRGDG*LLGQVT-YVPLR*SLL*RLFSLGSNVHD-RLGVHLLVL*QRRRLHREEHRGGRGV---------PTLYFTLPQRCFVPC-----GNGYEYDATLFTGQVA*RAR-GVKGEYSTIRPRNDWCLAVAVK 786
VNKNAE LRDR+V HEGKK L VEG G+L +A LI+++ G+IRQN+K PELADWF+PG +TT TDEV AAATA+ SLQAYF Y++ L CG+PSVTLMGTV+DWKLLR K+ER+L+FEV+ NPE+ VME V +R V H G G + +T ++P +G N + R+G++ RGG V P + V C NG EYD TLF GQVA AR G +G Y RPRN WCLAV K
Sbjct: 202 VNKNAESLRDRIVNHEGKKVLRVEGGGNLFSAETPVLIREMLGKIRQNVKMPELADWFKPGFTTTANTDEVAAAATAITSLQAYFSYEIHLECGLPSVTLMGTVQDWKLLRAKVERLLDFEVKDNPEEDVMEVWVGYLREVCDGFVESAEHPDSTETLQVWDKVVPHIGGGSGVSYITGWLPAFACFNKDGKFMGRNTNKARIGLN---------------RGGNAVRDESGECKYPLIDTGEICHNAVSCPVKINDNGVEYDGTLFVGQVALEARNGGEGGYP--RPRNGWCLAVPAK 483
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Match: D7G2F1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F1_ECTSI) HSP 1 Score: 188 bits (477), Expect = 4.320e-55 Identity = 93/141 (65.96%), Postives = 114/141 (80.85%), Query Frame = 1
Query: 1 VNKNAEGLRDRVVEHEGKKELTVEGYGSLETAHYATLIKDLRGQIRQNIKSPELADWFRPGLSTTTETDEVCAAATAMASLQAYFEYKMCLRCGIPSVTLMGTVEDWKLLREKIERMLEFEVQGNPEDKVME*GVRRVRGV 423
VNKNAE LRDR+V+HEGKK L VEG G+L + Y LI+++ +IR+NIK+PELADWF+PG +TTT+TDEV AAATAMASLQAYF Y++ CG+PSVTLMGTV+DWKLLR K+ER+L+FEV NPE VME V +R V
Sbjct: 68 VNKNAESLRDRIVDHEGKKALGVEGGGNLFSLDYPALIREMLAKIRENIKTPELADWFKPGFTTTTDTDEVAAAATAMASLQAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKV 208 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16054.4426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16054.4426.1 >prot_Ecto-sp13_S_contig16054.4426.1 ID=prot_Ecto-sp13_S_contig16054.4426.1|Name=mRNA_Ecto-sp13_S_contig16054.4426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp MCLYAEVFSDDYFRSGVTFTTGWVSTFSCFDKDGDFIGKNTEEGGEFPLYback to top mRNA from alignment at Ecto-sp13_S_contig16054:2..1996+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16054.4426.1 ID=mRNA_Ecto-sp13_S_contig16054.4426.1|Name=mRNA_Ecto-sp13_S_contig16054.4426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1995bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16054:2..1996+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16054:2..1996+ >mRNA_Ecto-sp13_S_contig16054.4426.1 ID=mRNA_Ecto-sp13_S_contig16054.4426.1|Name=mRNA_Ecto-sp13_S_contig16054.4426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=309bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16054:2..1996+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |