prot_Ecto-sp13_S_contig1604.4421.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1604.4421.1
Unique Nameprot_Ecto-sp13_S_contig1604.4421.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: D7G968_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G968_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 6.010e-51
Identity = 85/109 (77.98%), Postives = 95/109 (87.16%), Query Frame = 0
Query:   21 MISKSKTREARKRRPALRR-SHLLVAILMSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDNAAYARLSRAGKDSTGSLRYCRALPY 128
            MISKSKTR+ARKRRP LRR SHLLVA  MSA+ V +VESNRL+EFPSG  C WNDLPHPAQFA+IFLMLALLFGVH+IFGKLD+AAYARLSRA K+STGS+RY    P+
Sbjct:    1 MISKSKTRKARKRRPGLRRRSHLLVATAMSAMIVGIVESNRLVEFPSGVMCTWNDLPHPAQFAVIFLMLALLFGVHQIFGKLDSAAYARLSRAVKNSTGSIRYSVGSPH 109          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: A0A6H5JLZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ1_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 3.670e-48
Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 0
Query:   21 MISKSKTREARKRRPALRRSHLLVAILMSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDNAAYARLSRA 112
            MI KSKTREARKR PALRRSHLLVA +MSA TV +VESNRL+EFPS  RCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLD+AAYARLSRA
Sbjct:    1 MIRKSKTREARKRPPALRRSHLLVATVMSATTVKIVESNRLVEFPSVFRCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDDAAYARLSRA 92          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: A0A6H5JK72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK72_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.290e-37
Identity = 68/79 (86.08%), Postives = 73/79 (92.41%), Query Frame = 0
Query:    8 PTPTVFRELGASAMISKSKTREARKRRPALRRSHLLVAILMSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFL 86
            PTPT FRE+GAS MISKSKTREARKRRPALRRSHLLVAI MSA+TV +VESNRL+EFPSGARCMW +LPHP QFAIIFL
Sbjct:   25 PTPT-FREVGASPMISKSKTREARKRRPALRRSHLLVAIAMSAMTVRIVESNRLVEFPSGARCMWKNLPHPVQFAIIFL 102          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: D7G4F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F6_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 4.160e-22
Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   47 LMSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDNAAYARLSRA 112
            L+SAI V +VE  RL+E PSG RCMWNDLPH  QFAI+FLML +L+GV+R+F K D A Y+RL+ A
Sbjct:   17 LVSAIQVDLVEGKRLIELPSGVRCMWNDLPHGLQFAILFLMLGILYGVNRLFDKADEAMYSRLTCA 82          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: D7FU60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU60_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.250e-21
Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 0
Query:   41 HLLVAILMSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDNAAYARLSRA 112
            H LV ++ SA+ V V ES +L+EF SG +CMW DLPHP QFA++ +M AL FG++RIFGKLD AAYARLSRA
Sbjct:  138 HFLVLVI-SAMVVGVAES-KLVEFQSGFKCMWYDLPHPVQFAVLLMMPALFFGINRIFGKLDKAAYARLSRA 207          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: A0A6H5KYN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYN8_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.790e-19
Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 0
Query:   41 HLLVAILMSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDNAAYARLSRA 112
            H LV ++ SA+ V V ES +L+EF SG +C+W DLPHP QFA++ +M AL FG++ IFGKLD  AYARLSRA
Sbjct:   47 HFLV-LVTSAMVVGVAES-KLVEFRSGFKCIWYDLPHPVQFAVLLMMPALFFGINWIFGKLDKVAYARLSRA 116          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: D7G956_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G956_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.810e-19
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0
Query:   48 MSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDNAAYARLSRA 112
            MS   V V ESN L++ PSG +CMW +L HP QFA++ +M AL  GV+R+FG LD AAYARLSRA
Sbjct:    1 MSVTVVGVAESNMLVDLPSGFKCMWYNLSHPVQFAVLLVMPALFLGVNRMFGMLDKAAYARLSRA 65          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: D7FNC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNC6_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 3.580e-19
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0
Query:    8 PTPTVFRELGASAMISKSKTREARKRRPALRRSHLLVAILMSAITVSVVESN 59
            PTPT F ELGASAMISKSKTREARKRRPALRRSHLLVAILMSA+TVSVVESN
Sbjct:   10 PTPT-FLELGASAMISKSKTREARKRRPALRRSHLLVAILMSAMTVSVVESN 60          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: A0A6H5JJ82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ82_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 6.900e-19
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   47 LMSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDNAAYARLSRA 112
            L+S   V VVE   L+EFPSG RCMWNDLPH  QFAI+ LML +L+GV+R+F K D A Y RL+ A
Sbjct:   63 LISVAHVDVVEGKWLIEFPSGFRCMWNDLPHGLQFAILLLMLGILYGVNRLFDKADEAIYTRLTCA 128          
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Match: A0A6H5L6K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K1_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.480e-17
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:   24 KSKTREARKRRPALR---RSHL--------LVAILMSAITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDNAAYARLSRA 112
            KS+TR+  + + ALR   RS           +  L+SA+ V +VE   L+EFP   RC+WNDLPH  QFAI+FLML +L+GV+R+F K D A + RL+ A
Sbjct:   31 KSETRQLSRNKAALRPFVRSSTGRSLGGRRAILALVSAVHVDLVEGKWLIEFPPRFRCIWNDLPHGLQFAILFLMLGVLYGVNRLFDKADQAMHTRLTCA 130          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1604.4421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7G968_ECTSI6.010e-5177.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLZ1_9PHAE3.670e-4888.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK72_9PHAE1.290e-3786.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4F6_ECTSI4.160e-2263.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU60_ECTSI2.250e-2163.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYN8_9PHAE1.790e-1959.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G956_ECTSI1.810e-1960.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FNC6_ECTSI3.580e-1994.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ82_9PHAE6.900e-1960.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6K1_9PHAE2.480e-1746.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..128
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1604contigEcto-sp13_S_contig1604:5551..7442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1604.4421.1mRNA_Ecto-sp13_S_contig1604.4421.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1604 5551..7442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1604.4421.1 ID=prot_Ecto-sp13_S_contig1604.4421.1|Name=mRNA_Ecto-sp13_S_contig1604.4421.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
ARLVSCTPTPTVFRELGASAMISKSKTREARKRRPALRRSHLLVAILMSA
ITVSVVESNRLLEFPSGARCMWNDLPHPAQFAIIFLMLALLFGVHRIFGK
LDNAAYARLSRAGKDSTGSLRYCRALPY
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