prot_Ecto-sp13_S_contig16037.4418.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16037.4418.1
Unique Nameprot_Ecto-sp13_S_contig16037.4418.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length166
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16037.4418.1 vs. uniprot
Match: D8LKD7_ECTSI (ACB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD7_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 5.220e-52
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0 
Query:    1 MANARQYGEADKLALYGLFKQAKWGDCPAGLVTAQRGNPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVISGNSDTS 87
            MANARQYGEADKLALYGLFKQAKWGDCP GLVTAQRGNPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVISGNSDTS
Sbjct:  118 MANARQYGEADKLALYGLFKQAKWGDCPDGLVTAQRGNPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVISGNSDTS 204
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BLAST of mRNA_Ecto-sp13_S_contig16037.4418.1 vs. uniprot
Match: A0A6H5LAN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN0_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.230e-46
Identity = 82/87 (94.25%), Postives = 86/87 (98.85%), Query Frame = 0 
Query:    1 MANARQYGEADKLALYGLFKQAKWGDCPAGLVTAQRGNPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVISGNSDTS 87
            M+NARQYGEADKLALYGLFKQAKWGDCPAG+V AQRG+PVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVV+SGNSDTS
Sbjct: 1761 MSNARQYGEADKLALYGLFKQAKWGDCPAGMVAAQRGDPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVMSGNSDTS 1847
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16037.4418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKD7_ECTSI5.220e-5298.85ACB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LAN0_9PHAE1.230e-4694.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000582Acyl-CoA-binding protein, ACBPPFAMPF00887ACBPcoord: 7..67
e-value: 1.4E-10
score: 41.2
IPR000582Acyl-CoA-binding protein, ACBPPROSITEPS51228ACB_2coord: 1..76
score: 14.994
IPR014352FERM/acyl-CoA-binding protein superfamilyGENE3D1.20.80.10coord: 2..92
e-value: 1.7E-10
score: 42.3
IPR035984Acyl-CoA binding protein superfamilySUPERFAMILY47027Acyl-CoA binding proteincoord: 7..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16037contigEcto-sp13_S_contig16037:426..1408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16037.4418.1mRNA_Ecto-sp13_S_contig16037.4418.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16037 419..1408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16037.4418.1 ID=prot_Ecto-sp13_S_contig16037.4418.1|Name=mRNA_Ecto-sp13_S_contig16037.4418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=166bp
MANARQYGEADKLALYGLFKQAKWGDCPAGLVTAQRGNPVGSVKVRAWVT
NRGKPTAQAMQEFIVVLGRVSPGWESRVVISGNSDTSSNTTTTPSGPAPS
LLNTPGGGGGGLTPGGGANGGGGGRFARMGSAASSVMSSPDGLPTLVGGG
VRGDAMGGVVPAPPAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000582Acyl-CoA-binding_protein
IPR014352FERM/acyl-CoA-bd_prot_sf
IPR035984Acyl-CoA-binding_sf