prot_Ecto-sp13_S_contig1602.4409.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1602.4409.1
Unique Nameprot_Ecto-sp13_S_contig1602.4409.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length551
Homology
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A6H5KF81_9PHAE (Arf-GAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF81_9PHAE)

HSP 1 Score: 615 bits (1587), Expect = 6.090e-215
Identity = 489/552 (88.59%), Postives = 495/552 (89.67%), Query Frame = 0
Query:    1 MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDSVADGLDRLMRDVDGKPAASALARGFTNGGAAAXXXXXXXXXXXXXXXXXXXFAQAFPSSQPAAPTNGSAAAGRHTAADVPAPPAXXXPAPVKPYEPKPRGSLSVSPPTAPAAAAGAVDEPKAAPVVRLSSSKSPPPRVRKGGAKKMXXXXXXXXXXXSGGAAVKLSGFDDTTXXXXXXXXXXXXXXXXXX-DADLALARKLXXXXXXXXXXXXXXXRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYGYRNGASGIGSXXXXXXXXXXXXXXXXXXXX-FDKDKYKNVKGIGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMYXDXXXXXXXXXXYDGGGEGRIGDMADQIAASAAAEIREVAQTAGKLKDMTKGFLDDLQNMVG 550
            MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVD+VADGLDRLM D+DGKPAASA A+GFTNGG   XXXXXXXX           FAQAFPSS PAAPT+GSAAAG H AADVPAPPA    APVKPYEPKPRGSLSVSPPTAPAAAAGAVDEPKA PVVRL SSKSPPPR+RKGGAKKMXXXXXXXXXXXSGGAAVKLSGF+DTT  XXXXXXXXXXXXXXXX DADLALARKLXXXXXXXXXXXXXXXRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXX  FDK KYKNVKGIGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMYX XXXXXXXXXXYDGG     GDMADQIAASAA      AQ AGKLKDMTKGFLDDLQNMVG
Sbjct:    1 MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDNVADGLDRLMEDMDGKPAASAPAKGFTNGGXXXXXXXXXXXPSVDAAAAAAKFAQAFPSSHPAAPTSGSAAAGGHAAADVPAPPA----APVKPYEPKPRGSLSVSPPTAPAAAAGAVDEPKATPVVRLISSKSPPPRIRKGGAKKMXXXXXXXXXXXSGGAAVKLSGFEDTTTAXXXXXXXXXXXXXXXXXDADLALARKLXXXXXXXXXXXXXXXRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFDKGKYKNVKGIGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMYXXXXXXXXXXXXYDGGVG--FGDMADQIAASAA------AQAAGKLKDMTKGFLDDLQNMVG 540          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A835YU03_9STRA (Arf-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU03_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.240e-59
Identity = 98/158 (62.03%), Postives = 124/158 (78.48%), Query Frame = 0
Query:    3 DQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMA---DPG--VVTPPQSPREDPVDSVADGLDRLMRDVD 155
            + Y+  D+VKSTFRRL++  DNKVCFDCPTRNPTWAS TYGIF+CYDCSAVHRNMGVH+TFVRS+ELDKW+  E++ MKRGGN  AR++F+SHGV+DM K++ KY SRAA+ YRAHLK+ +A   DP   V       R+    ++A GLDR+MRD++
Sbjct:    5 NDYVEADLVKSTFRRLQAHRDNKVCFDCPTRNPTWASVTYGIFLCYDCSAVHRNMGVHITFVRSVELDKWRQWELDSMKRGGNAAARAYFQSHGVSDMGKTDAKYRSRAAEAYRAHLKQLIAETPDPAADVWNSAHGARDADEAAIACGLDRIMRDIE 162          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A7S2B6H1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6H1_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.490e-46
Identity = 90/158 (56.96%), Postives = 113/158 (71.52%), Query Frame = 0
Query:    1 MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDME-KSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDP-VDSVADGLDRLMRDVDG 156
            M  +Y+  +V  S F++LR+K  NKVCFDC +RNPTWASAT+GIFIC DCSA HR MGVH+TFVRS+ELD+W P ++++MK GGN NA +FFRSHGV DM  K EQKY S AA+ Y+ HLKK M+   V   P+ P+  P VD     +D L+ DV G
Sbjct:    1 MNGKYVTQEVKNSAFKKLRTKGANKVCFDCSSRNPTWASATFGIFICLDCSASHRRMGVHITFVRSVELDEWTPDQLKMMKVGGNENAGTFFRSHGVRDMHIKHEQKYVSSAARQYKNHLKKLMSTEDVEEVPEEPQRKPSVD-----IDSLLLDVQG 153          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A4D9D0S2_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0S2_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.600e-46
Identity = 85/153 (55.56%), Postives = 110/153 (71.90%), Query Frame = 0
Query:    4 QYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADP-----GVVTPPQSPREDPVDSVADGLDRLM 151
            +Y+      + F+R++S+P+N+VCFDCPTRNPTWASATYG+FICY+CSA HR +GVH+TFVRS++LD+W P ++  M+ GGN NA  FFR HGVT   K EQKY SRAA++Y+AHL K +AD        + PP  P  D V +V  GLD LM
Sbjct:    3 KYVTTADRMAAFKRMKSRPENQVCFDCPTRNPTWASATYGVFICYNCSATHRALGVHITFVRSVDLDEWTPQQLLTMRLGGNSNAAQFFRRHGVTHGGKVEQKYSSRAAELYKAHLSKLVADKILMDANALEPP--PPTDTVAAVGCGLDNLM 153          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A7S2SFF1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFF1_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.950e-44
Identity = 73/121 (60.33%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    6 LPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDME-KSEQKYHSRAAQMYRAHLKKAMAD 125
            +P +   S F+RL++K DN++CFDCPTRNPTWASAT+G+F+C DCSA HR MGVHVTFVRS+ELD+W   ++  M+ GGNGNA +FFRSHGV D+  K+E+KY S AA+ Y+ HLKK + +
Sbjct:   16 VPSEAKTSFFKRLKAKRDNRICFDCPTRNPTWASATFGVFLCLDCSAAHRRMGVHVTFVRSVELDEWTEKQLRTMEVGGNGNAAAFFRSHGVRDLHIKTEEKYQSSAARHYKNHLKKLLEE 136          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A7S3HR90_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR90_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.710e-41
Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 0
Query:    5 YLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEK-SEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDSVADGLDRLMRDVDGKPAASA 162
            Y+      + F++LR+K DNKVCFDC  RNP+WAS TYG+FIC DCSAVHR +GVH+TFVRS +LD+W   ++++M+  GNGNAR FF+ HGVTD +  SE+KY S+AA  Y  HL+K + D       +S  ED  D+ A GLD L+  +    +A+A
Sbjct:    7 YVDTVEKNNVFKKLRAKLDNKVCFDCSARNPSWASVTYGVFICLDCSAVHRRLGVHITFVRSCDLDEWTQEQLDIMRVSGNGNAREFFKKHGVTDAQMGSEKKYSSKAAPEYLKHLQKLLHDGPQTLRSRSRSEDVNDNHAKGLDGLINSLSMNSSATA 165          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A7S1CBA6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA6_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.770e-40
Identity = 82/176 (46.59%), Postives = 107/176 (60.80%), Query Frame = 0
Query:    5 YLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDME--KSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDSVADGLDRL----MRDVDGKPAASALARGFTNGGAAA 174
            YL  +       RLR+ P N VCFDC  RNP+WASAT+G+FIC  CSA HR MGVH++FVRS +LDKW P +ME+M+ GGN NA  FF++ G +D    K E+KYHSRAA +Y+ HL++ +        P++    P     DGLD L     R + G  AA ++  G T GG  A
Sbjct:    1 YLTKEETVRKMARLRALPGNNVCFDCGARNPSWASATFGVFICIGCSATHRRMGVHISFVRSCDLDKWTPDQMELMRIGGNANAAKFFKTKGWSDATGGKHEEKYHSRAANLYKQHLQRLVQTSSTPASPEAASA-PEGFTIDGLDDLELSVTRSISGTSAARSV--GSTGGGPPA 173          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A1D6GD40_MAIZE (ADP-ribosylation factor GTPase-activating protein AGD10 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6GD40_MAIZE)

HSP 1 Score: 152 bits (383), Expect = 3.130e-40
Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = 0
Query:    3 DQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKK 121
            D Y   + +   FRRL++KP+NK+CFDC  +NPTWAS TYGIF+C DCSAVHR++GVH+TFVRS  LD W P ++++M  GGN  A +FF+ HG TD  K E KY SRAA++YR  L K
Sbjct:   11 DAYTDKNAI---FRRLKAKPENKMCFDCNAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTPDQLKMMAFGGNNRAHAFFKQHGWTDGGKVEAKYTSRAAELYRQMLNK 126          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: K0TKZ9_THAOC (Arf-GAP domain-containing protein (Fragment) n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKZ9_THAOC)

HSP 1 Score: 152 bits (385), Expect = 7.040e-40
Identity = 66/116 (56.90%), Postives = 87/116 (75.00%), Query Frame = 0
Query:    6 LPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKK 121
            +P     + FRRL++ P NK+CFDCP   PTWAS TYGIF+C DCSA HRNMGVH+TFVR+++LD+W   +++ MK GGN NAR FF  HG +DM+ S +KY+ +AA+ YRA L+K
Sbjct:   23 IPTADKNAQFRRLKNLPGNKLCFDCPATRPTWASVTYGIFLCLDCSAAHRNMGVHLTFVRAVDLDEWTQRQIDAMKIGGNENARKFFSKHGCSDMKGSNKKYNHKAARAYRAELEK 138          
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Match: A0A7N1A3H7_KALFE (Arf-GAP domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A3H7_KALFE)

HSP 1 Score: 157 bits (396), Expect = 3.970e-39
Identity = 74/133 (55.64%), Postives = 94/133 (70.68%), Query Frame = 0
Query:   13 STFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMA-----DPGVVTPPQSPREDPV 140
            + FR+L+SKP+NKVCFDC  +NPTWAS TYGIF+C DCSAVHR++GVH++FVRS  LD W P ++++M  GGNG AR FF+ HG  D  K E KY SRAA +Y+  L K +A     D G+   P +PR  PV
Sbjct:   11 AVFRKLKSKPENKVCFDCDAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKMMSYGGNGRARVFFKQHGWIDGSKVEAKYTSRAADLYKQLLSKEIASSVVEDLGLPESPVAPRPAPV 143          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1602.4409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF81_9PHAE6.090e-21588.59Arf-GAP domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YU03_9STRA1.240e-5962.03Arf-GAP domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2B6H1_9STRA3.490e-4656.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D0S2_9STRA4.600e-4655.56Arf-GAP domain-containing protein n=2 Tax=Monodops... [more]
A0A7S2SFF1_9STRA1.950e-4460.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3HR90_9STRA6.710e-4150.31Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1CBA6_9STRA2.770e-4046.59Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A1D6GD40_MAIZE3.130e-4057.14ADP-ribosylation factor GTPase-activating protein ... [more]
K0TKZ9_THAOC7.040e-4056.90Arf-GAP domain-containing protein (Fragment) n=2 T... [more]
A0A7N1A3H7_KALFE3.970e-3955.64Arf-GAP domain-containing protein n=2 Tax=Kalancho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 24..43
score: 50.17
coord: 43..60
score: 55.56
coord: 64..85
score: 40.75
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 12..128
e-value: 3.3E-44
score: 162.8
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 13..118
e-value: 2.2E-34
score: 118.0
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 12..116
score: 26.054
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 7..131
e-value: 1.4E-48
score: 166.4
NoneNo IPR availablePANTHERPTHR45686FAMILY NOT NAMEDcoord: 12..547
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 12..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1602contigEcto-sp13_S_contig1602:5738..10215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1602.4409.1mRNA_Ecto-sp13_S_contig1602.4409.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1602 5673..10950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1602.4409.1 ID=prot_Ecto-sp13_S_contig1602.4409.1|Name=mRNA_Ecto-sp13_S_contig1602.4409.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=551bp
MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDC
SAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDM
EKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDSVADGLDRL
MRDVDGKPAASALARGFTNGGAAAESLANGGAPAADAAAAAAKFAQAFPS
SQPAAPTNGSAAAGRHTAADVPAPPAAPAPAPVKPYEPKPRGSLSVSPPT
APAAAAGAVDEPKAAPVVRLSSSKSPPPRVRKGGAKKMGARKLGAMKIGS
GGAAVKLSGFDDTTTAPAAVAAATPGAAGGGEDADLALARKLQEEEDLAA
AVAAPSSRLAAAASAALAPQPSKSKAARAGEGGGGSIYRSANDSSSSSSY
GGGAGGAYGYRNGASGIGSSSISYGNGGGYGGGGGGGSSFDKDKYKNVKG
IGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMYFDREEGGGGGGG
YDGGGEGRIGDMADQIAASAAAEIREVAQTAGKLKDMTKGFLDDLQNMVG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO