prot_Ecto-sp13_S_contig1602.4408.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1602.4408.1
Unique Nameprot_Ecto-sp13_S_contig1602.4408.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length335
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1602.4408.1 vs. uniprot
Match: D8LT64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT64_ECTSI)

HSP 1 Score: 552 bits (1423), Expect = 8.180e-194
Identity = 308/335 (91.94%), Postives = 311/335 (92.84%), Query Frame = 0 
Query:    1 MAAAGRGWKCGVCNAKAGDLVCGACVTREAERRRAERAKRLGGLESVREAATVAAQERGVAVQHNARLQKEEADECRLKDHVREVAKRVAEERIKVASAAFALKHHRDLLAAAESHLSREQASAVEMNEALLVGLRRHAEDAARTLRQRRWRKVVQLFVLLPVEPSMPPRRERPPRGKKSWGRGDHSPGTAPSTAEGEEGRGVTRLPPPGGGVAKAGGSGAGEVVSGVSTLVDLPLPNNGDYSQVPADVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPRERRVQYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLR 335
            MAAAGRGWKCGVCNAKAGDLVCGACVTREAERRRAERAKRLG LESVREAATVAAQERGVAVQH+ARLQKEEADECRLKDHVREVAKRVAEERIKVASAAFALKHHRDLLAAAESHLSREQASAVEMNEALL+GLRRHAEDAARTLRQRRWRKVVQLFVLLPVEPSMPPRRE P RGKK+ G GDHSPGTAPSTAE EEGR VTRLP               EVVSGVSTLVDLPLPNNGDYSQVPADVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPRER  QYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLR
Sbjct:    1 MAAAGRGWKCGVCNAKAGDLVCGACVTREAERRRAERAKRLGALESVREAATVAAQERGVAVQHDARLQKEEADECRLKDHVREVAKRVAEERIKVASAAFALKHHRDLLAAAESHLSREQASAVEMNEALLIGLRRHAEDAARTLRQRRWRKVVQLFVLLPVEPSMPPRREWPLRGKKNLGGGDHSPGTAPSTAESEEGREVTRLPXXXXXXXXXXXXXXXEVVSGVSTLVDLPLPNNGDYSQVPADVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPRERSSQYPLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLR 335
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BLAST of mRNA_Ecto-sp13_S_contig1602.4408.1 vs. uniprot
Match: A0A4D9CP94_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CP94_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.590e-13
Identity = 83/263 (31.56%), Postives = 125/263 (47.53%), Query Frame = 0 
Query:   78 LKDHVREVAKRVAEERIKVASAAFALKHHRDLLAAAESHLSREQASAVEMNEALLVGLRRHAEDAARTLRQRRWRKVVQLFVLLPVEPSMPPRRERP----------------------PRGKKSWGRGDHSPGT------APSTAEGEEGRGVTR-----LPPPGGGVAKAGGSGAGEVVSGVSTLVDLPLPNNGDYSQV--PADVLMASLALVARLVAAVASCLGVSLPHPL-FPAASTRYATISVDSSPRERRVQYPLCP 304
            LK  ++E A+RV + R+ VA   FAL+  R  +  A   L   +      +  +  GLR + E A   ++QR W +V++ FV+ P+E  +P     P                      P    S   G  SP T      A S ++   G+G        +PPP      +  S   + ++GVST+V LPLPN G+Y ++  P +V   +L LVARL  ++A  LG+ LPHPL FPA  + YA I+ D+   +RR ++ L P
Sbjct:   80 LKTRLQETAERVRDLRLAVARKTFALEERRKAVDVARQRLEEVKRWQGSQSTPVQQGLRWYKEQAMEVVQQRVWTRVLEHFVVFPIEADIPVVSRPPLLLPSRFXXXXXXXXXLLPVHSPXFHSSPSPGSRSPSTDVPTLPASSHSQHVPGKGTQEQAPAFIPPP---CPPSRASAGPKPLTGVSTIVGLPLPNAGNYRELGLPDEVCETALYLVARLTWSLAETLGMRLPHPLRFPAGKS-YALIAEDA---QRRTEFALSP 335
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BLAST of mRNA_Ecto-sp13_S_contig1602.4408.1 vs. uniprot
Match: A0A7S3GZ98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ98_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 7.050e-7
Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = 0 
Query:  225 VSGVSTLVDLPLPNNGDYSQVPADVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPRER----RVQYPLCPLSKLAEIG 312
            VSG S+++ +PLPN+GDYS  P DV+  + A +A LV A+++ L + LPHPL P  ST    IS       R     + Y LCP  ++   G
Sbjct:   36 VSGCSSILSVPLPNSGDYSGTPVDVVAMAFAHIALLVDALSATLNIPLPHPLLPFQSTE-CRISAQHDLWARAQIPNLSYSLCPAKQINHEG 126
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1602.4408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LT64_ECTSI8.180e-19491.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CP94_9STRA2.590e-1331.56Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3GZ98_9STRA7.050e-740.22Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018791UV radiation resistance protein/autophagy-related protein 14PFAMPF10186Atg14coord: 228..283
e-value: 8.5E-9
score: 34.9
NoneNo IPR availablePANTHERPTHR15157FAMILY NOT NAMEDcoord: 44..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1602contigEcto-sp13_S_contig1602:423..4340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1602.4408.1mRNA_Ecto-sp13_S_contig1602.4408.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1602 423..4438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1602.4408.1 ID=prot_Ecto-sp13_S_contig1602.4408.1|Name=mRNA_Ecto-sp13_S_contig1602.4408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=335bp
MAAAGRGWKCGVCNAKAGDLVCGACVTREAERRRAERAKRLGGLESVREA
ATVAAQERGVAVQHNARLQKEEADECRLKDHVREVAKRVAEERIKVASAA
FALKHHRDLLAAAESHLSREQASAVEMNEALLVGLRRHAEDAARTLRQRR
WRKVVQLFVLLPVEPSMPPRRERPPRGKKSWGRGDHSPGTAPSTAEGEEG
RGVTRLPPPGGGVAKAGGSGAGEVVSGVSTLVDLPLPNNGDYSQVPADVL
MASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPRERRVQY
PLCPLSKLAEIGVMGAASAVCKTMGAFDTALDLLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018791UV_resistance/autophagy_Atg14