prot_Ecto-sp13_S_contig16004.4401.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16004.4401.1
Unique Nameprot_Ecto-sp13_S_contig16004.4401.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: A0A453FVP7_AEGTS (Histone H4 n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453FVP7_AEGTS)

HSP 1 Score: 207 bits (527), Expect = 4.130e-67
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0 
Query:   13 LSSFSQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            LSS+S+QA MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   17 LSSYSEQAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 128
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 202 bits (514), Expect = 3.590e-65
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0 
Query:   13 LSSFSQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            +SS    +NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   14 VSSNKPTSNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: A0A452ZB17_AEGTS (Histone H4 n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZB17_AEGTS)

HSP 1 Score: 200 bits (509), Expect = 2.140e-64
Identity = 105/124 (84.68%), Postives = 110/124 (88.71%), Query Frame = 0 
Query:    1 PAPSTSQHTNQTLSSFSQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            P P    H + + +     A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    3 PPPLLQPHISSSAARRGSSATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 126
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: A0A2P5DRN5_PARAD (Histone H4 (Fragment) n=1 Tax=Parasponia andersonii TaxID=3476 RepID=A0A2P5DRN5_PARAD)

HSP 1 Score: 200 bits (509), Expect = 2.220e-64
Identity = 103/108 (95.37%), Postives = 107/108 (99.07%), Query Frame = 0 
Query:   17 SQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            S++A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   20 SRRAKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 127
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: A0A2S2QRE4_9HEMI (Histone H4 (Fragment) n=4 Tax=Hexapoda TaxID=6960 RepID=A0A2S2QRE4_9HEMI)

HSP 1 Score: 199 bits (507), Expect = 3.230e-64
Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 0 
Query:   16 FSQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            F + +NM+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    9 FVRSSNMTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 117
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: UPI0008738E0C (histone H4-like n=1 Tax=Lates calcarifer TaxID=8187 RepID=UPI0008738E0C)

HSP 1 Score: 200 bits (508), Expect = 3.700e-64
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 0 
Query:   15 SFSQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            SFS    MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   23 SFSDPNKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 132
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: A0A8J5LQK2_ZINOF (Histone H4 n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LQK2_ZINOF)

HSP 1 Score: 200 bits (509), Expect = 3.980e-64
Identity = 103/113 (91.15%), Postives = 109/113 (96.46%), Query Frame = 0 
Query:   12 TLSSFSQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            + +SF+   +MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   33 SCTSFTSFVDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 145
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.170e-64
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 
Query:   22 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: UPI00167F827B (histone H3.1t-like n=3 Tax=Euteleostomi TaxID=117571 RepID=UPI00167F827B)

HSP 1 Score: 203 bits (516), Expect = 4.230e-64
Identity = 107/116 (92.24%), Postives = 110/116 (94.83%), Query Frame = 0 
Query:    9 TNQTLSSFSQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            TN +LS    Q NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:  108 TNLSLSLARTQFNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 223
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Match: A0A1G4M1Q1_ANAPH (Core histone H2A/H2B/H3/H4 n=1 Tax=Anaplasma phagocytophilum TaxID=948 RepID=A0A1G4M1Q1_ANAPH)

HSP 1 Score: 200 bits (508), Expect = 4.650e-64
Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0 
Query:   20 ANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
            ANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   35 ANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 139
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16004.4401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A453FVP7_AEGTS4.130e-6795.54Histone H4 n=2 Tax=Triticinae TaxID=1648030 RepID=... [more]
A0A3L6V663_9STRA3.590e-6594.64Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A452ZB17_AEGTS2.140e-6484.68Histone H4 n=2 Tax=Aegilops tauschii subsp. strang... [more]
A0A2P5DRN5_PARAD2.220e-6495.37Histone H4 (Fragment) n=1 Tax=Parasponia andersoni... [more]
A0A2S2QRE4_9HEMI3.230e-6493.58Histone H4 (Fragment) n=4 Tax=Hexapoda TaxID=6960 ... [more]
UPI0008738E0C3.700e-6494.55histone H4-like n=1 Tax=Lates calcarifer TaxID=818... [more]
A0A8J5LQK2_ZINOF3.980e-6491.15Histone H4 n=1 Tax=Zingiber officinale TaxID=94328... [more]
A0A024G0M5_9STRA4.170e-64100.00Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI... [more]
UPI00167F827B4.230e-6492.24histone H3.1t-like n=3 Tax=Euteleostomi TaxID=1175... [more]
A0A1G4M1Q1_ANAPH4.650e-6498.10Core histone H2A/H2B/H3/H4 n=1 Tax=Anaplasma phago... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 41..60
score: 93.38
coord: 83..97
score: 91.96
coord: 26..37
score: 95.59
coord: 98..110
score: 90.05
coord: 110..121
score: 97.79
coord: 61..81
score: 93.56
IPR001951Histone H4SMARTSM00417h44coord: 37..111
e-value: 1.8E-29
score: 113.9
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 57..117
e-value: 3.5E-8
score: 33.5
IPR009072Histone-foldGENE3D1.10.20.10coord: 23..124
e-value: 4.5E-60
score: 202.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 8..121
NoneNo IPR availablePANTHERPTHR10484:SF171coord: 13..124
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 13..124
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 36..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16004contigEcto-sp13_S_contig16004:252..626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16004.4401.1mRNA_Ecto-sp13_S_contig16004.4401.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16004 252..626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16004.4401.1 ID=prot_Ecto-sp13_S_contig16004.4401.1|Name=mRNA_Ecto-sp13_S_contig16004.4401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
PAPSTSQHTNQTLSSFSQQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQG
ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARR
KTVTAMDVVYALKRQGRTLYGFGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR035425CENP-T/H4_C
IPR009072Histone-fold
IPR019809Histone_H4_CS