mRNA_Ecto-sp13_S_contig15987.4388.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15987.4388.1
Unique NamemRNA_Ecto-sp13_S_contig15987.4388.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: D7G650_ECTSI (DM10 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G650_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 9.790e-132
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 1 
Query:    4 QSDGVWCCGSEQQGANLESLFAPGGAVSRGKGGGATATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFGERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELMQQGGGSAP 579
            QSDGVWCCGSEQQGANLESLFAPGGAVSRGKGGGATATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFGE AKDSSGGGARTGVHCTDL EDGPSECRYFFELMQQGGGSAP
Sbjct:  191 QSDGVWCCGSEQQGANLESLFAPGGAVSRGKGGGATATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFGEGAKDSSGGGARTGVHCTDLTEDGPSECRYFFELMQQGGGSAP 382
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: A0A835YQV2_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQV2_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.320e-58
Identity = 95/181 (52.49%), Postives = 128/181 (70.72%), Query Frame = 1 
Query:   16 VWCCGSEQQGANLESLFAPGGAVSRGKGGGATATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFGERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELMQ 558
            VW    E+  A L  +    GA        A AT D+CTCCVIKPHAVKAG+AG+I+D +L QG+E++A+++  L R  A EFFEVYQG +P+Y E++D M T  C+A+E+R ++ V  FR+ AGPWDVEMAKELRP S+R +FG   +D+     R+GVHCT+LPEDG +EC+YFFE++Q
Sbjct:  207 VWAAPDEKAAAALGDILFGRGAARLA----ARATLDACTCCVIKPHAVKAGHAGRILDHVLAQGYEVTALDTVHLDRVSATEFFEVYQGAVPEYKELVDHMITSPCIAMEVRAEDAVATFRQTAGPWDVEMAKELRPGSLRALFG---RDN----VRSGVHCTELPEDGVAECQYFFEVLQ 376
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: A0A7S2XZY6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZY6_9STRA)

HSP 1 Score: 189 bits (479), Expect = 6.120e-55
Identity = 86/181 (47.51%), Postives = 125/181 (69.06%), Query Frame = 1 
Query:   16 VWCCGSEQQGANLESLFAPGGAVSRGKGGGATATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFGERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELMQ 558
            V C         LE LF      S+ +   + ATFD+CTCCV++PHAV AG+ GKIID I+ QG+E+SA++ F+L R+ ++EF EVY+GV+P++ ++++++ +G CVA+E+R +N V  FRE AGPWDVE+A+E+RPN++R  FG+             VHCTDLPEDG  E +YFFE++Q
Sbjct:   49 VTCAADGSSATQLEHLF-----FSKDRTHPSPATFDNCTCCVVRPHAVIAGHTGKIIDHIIKQGYEVSALQLFKLERSMSEEFLEVYKGVVPEFPDMVEQLCSGACVAMEVRAENAVQTFRETAGPWDVEIAREIRPNTLRARFGKSR-------IMNAVHCTDLPEDGILESQYFFEVLQ 217
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: A0A7S3YA09_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA09_HETAK)

HSP 1 Score: 186 bits (472), Expect = 1.720e-52
Identity = 80/151 (52.98%), Postives = 112/151 (74.17%), Query Frame = 1 
Query:  109 TATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFGERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELMQQ 561
            TATFDSCT CV++PHAV  G  G+++D +L QG+E+SA+E F L R QA+EF EVY+GV+P++ + +D++  G CVA+E+R ++ V  FR+ AGPWDVEMA++LRP ++R  +GE          R  VHCTDLPEDG  EC+YFF+L+Q+
Sbjct:  187 TATFDSCTACVVRPHAVARGLTGRVLDDVLAQGYEVSALEMFTLERPQAEEFLEVYKGVLPEWADAVDQLCAGACVAMEVRAEDPVATFRQTAGPWDVEMARDLRPATLRAKYGEDR-------VRNAVHCTDLPEDGVPECQYFFDLLQR 330
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: A0A067BJG1_SAPPC (NDK domain-containing protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BJG1_SAPPC)

HSP 1 Score: 176 bits (447), Expect = 2.320e-50
Identity = 80/149 (53.69%), Postives = 108/149 (72.48%), Query Frame = 1 
Query:  112 ATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFG-ERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELM 555
            ATF +CTCCVI+PH +K G+ G +ID IL  G  ISAME FRL RT A EFFE+Y GV+P + E +D +T+G C+ALE++G   V  FRE AGPWD++MA+EL+P++IR  FG +R +++        VHCTDLPEDG  E +YFF+++
Sbjct:   63 ATFANCTCCVIQPHVLKEGHVGSVIDAILECGLSISAMELFRLDRTSASEFFELYDGVVPHFNEAVDHLTSGPCIALELQGSGEVQRFREIAGPWDIDMARELKPSTIRARFGVDRVQNA--------VHCTDLPEDGALESQYFFDIL 203
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: J9HLG9_9SPIT (Nucleoside diphosphate kinase n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HLG9_9SPIT)

HSP 1 Score: 179 bits (455), Expect = 1.670e-49
Identity = 87/152 (57.24%), Postives = 111/152 (73.03%), Query Frame = 1 
Query:  109 TATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFG-ERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELMQQ 561
            +A F SCT C+IKPHAV  G+AGKIID IL +GFEISAME F L +  A+EFF VY+GV+ +YT +++ MTTG C+ LE+R +N V AFR+ AGP D E+AK LRPN+IRG FG ++ K++        VHCTDLPEDG  E  YFF +MQ+
Sbjct:  232 SAYFSSCTTCIIKPHAVANGDAGKIIDIILEEGFEISAMEMFTLDKPTAEEFFAVYKGVLQEYTPLIEHMTTGPCIVLEVRQENAVKAFRDLAGPMDPEIAKNLRPNTIRGRFGLDKVKNA--------VHCTDLPEDGTLESEYFFSIMQK 375
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: A0A482SHN4_9ARCH (DM10 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHN4_9ARCH)

HSP 1 Score: 177 bits (449), Expect = 6.730e-49
Identity = 91/176 (51.70%), Postives = 119/176 (67.61%), Query Frame = 1 
Query:   52 LESLFAPGGAVSR-------GKGGGATATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFG-ERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELM 555
            ++ LFA  G  S        G   G TAT DSCTCCVIKPHAVKA   G IID+I+NQG+EISA++S    + QA+EF EVY+GVIP+Y + + ++ TG  +ALE+R Q+ V  FR  +GPWD++MAKELRPN++R  +G +R  ++        VH TDLPEDGP EC Y F+LM
Sbjct:  183 VQVLFAKNGMQSSELASFLFGSEMGTTATLDSCTCCVIKPHAVKARCVGGIIDEIINQGYEISAVKSLLFEKAQAEEFLEVYKGVIPEYGDHVVQLCTGLSIALELRAQHAVETFRVTSGPWDIDMAKELRPNTLRAKYGIDRVLNA--------VHSTDLPEDGPLECEYCFKLM 350
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: A0A067CDC7_SAPPC (DM10 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDC7_SAPPC)

HSP 1 Score: 174 bits (441), Expect = 6.440e-48
Identity = 81/150 (54.00%), Postives = 109/150 (72.67%), Query Frame = 1 
Query:  112 ATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQN-VVGAFREAAGPWDVEMAKELRPNSIRGMFG-ERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELM 555
            ATF +CTCCVI+PH +K G+ G +ID IL  G  ISAME FRL RT A EFFE+Y GV+P + E +D +T+G C+ALE++G   VV  FRE AGPWD++MA+EL+P++IR  FG +R +++        VHCTDLPEDG  E +YFF+++
Sbjct:  188 ATFANCTCCVIQPHVLKEGHVGSVIDAILECGLSISAMELFRLDRTSASEFFELYDGVVPHFNEAVDHLTSGPCIALELQGSGEVVQRFREIAGPWDIDMARELKPSTIRARFGVDRVQNA--------VHCTDLPEDGALESQYFFDIL 329
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: A0A6G0XIJ6_9STRA (DM10 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIJ6_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.000e-47
Identity = 79/150 (52.67%), Postives = 106/150 (70.67%), Query Frame = 1 
Query:  112 ATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQ-NVVGAFREAAGPWDVEMAKELRPNSIRGMFG-ERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELM 555
            ATF +CTCCVI+PH +K G  G ++D IL  G  ISAME F L R  A EF E+Y GV+P Y E +D +T+G C+ALE+ G  +VV  FREAAGPWD++MA+EL+P++IR  FG +R  ++        +HCTDLPEDG  EC+YFF+++
Sbjct:  192 ATFSNCTCCVIQPHVLKEGQTGAVVDAILESGMTISAMELFNLDRASAAEFLELYDGVVPHYNEAVDHLTSGPCIALELHGDGDVVQRFREAAGPWDIDMARELKPSTIRARFGIDRVHNA--------IHCTDLPEDGVLECQYFFDIL 333
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BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Match: A0A812V6E0_SYMMI (NME7 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V6E0_SYMMI)

HSP 1 Score: 167 bits (422), Expect = 2.110e-47
Identity = 78/153 (50.98%), Postives = 104/153 (67.97%), Query Frame = 1 
Query:  103 GATATFDSCTCCVIKPHAVKAGNAGKIIDKILNQGFEISAMESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGAFREAAGPWDVEMAKELRPNSIRGMFGERAKDSSGGGARTGVHCTDLPEDGPSECRYFFELMQQ 561
            G TAT DSCTCC+IKPHAVKAG  G+I+D IL+QG+E+SA+++    RT A EF EVY GV+P +   + ++ +G CVALEIR ++ V  FR   GPWD+ MAKELRP ++R +FG           R+ VHCTDL  DG +E  Y F++M +
Sbjct:    2 GDTATLDSCTCCIIKPHAVKAGLTGQILDSILSQGYEVSAVQTLVFDRTAALEFLEVYNGVVPHFEVHVVQLASGPCVALEIRAEDAVNTFRVTCGPWDISMAKELRPGTLRALFGID-------NVRSAVHCTDLAVDGVTESEYCFKIMDK 147
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15987.4388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G650_ECTSI9.790e-13298.96DM10 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YQV2_9STRA2.320e-5852.49Nucleoside diphosphate kinase n=1 Tax=Tribonema mi... [more]
A0A7S2XZY6_9STRA6.120e-5547.51Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3YA09_HETAK1.720e-5252.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A067BJG1_SAPPC2.320e-5053.69NDK domain-containing protein (Fragment) n=1 Tax=S... [more]
J9HLG9_9SPIT1.670e-4957.24Nucleoside diphosphate kinase n=1 Tax=Oxytricha tr... [more]
A0A482SHN4_9ARCH6.730e-4951.70DM10 domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A067CDC7_SAPPC6.440e-4854.00DM10 domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A6G0XIJ6_9STRA1.000e-4752.67DM10 domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A812V6E0_SYMMI2.110e-4750.98NME7 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15987contigEcto-sp13_S_contig15987:893..4019 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score243.0
Seed ortholog evalue6.9e-62
Seed eggNOG ortholog2880.D7G650
Preferred nameNME7
Model size1095
KEGG rclassRC00002
KEGG koko:K00940,ko:K02154
KEGG TC3.A.2.2
KEGG ReactionR00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895
KEGG Pathwayko00190,ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,ko04142,ko04145,ko04721,ko04966,ko05110,ko05120,ko05152,ko05165,ko05323,map00190,map00230,map00240,map00983,map01100,map01110,map01130,map04016,map04142,map04145,map04721,map04966,map05110,map05120,map05152,map05165,map05323
KEGG ModuleM00049,M00050,M00052,M00053,M00160
Hectar predicted targeting categoryother localisation
GOsGO:0003002,GO:0003341,GO:0003351,GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009132,GO:0009141,GO:0009142,GO:0009799,GO:0009855,GO:0009987,GO:0010033,GO:0010970,GO:0015630,GO:0015949,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0023052,GO:0030030,GO:0030705,GO:0031503,GO:0032501,GO:0032502,GO:0033036,GO:0034097,GO:0034613,GO:0034641,GO:0034654,GO:0036064,GO:0042073,GO:0042221,GO:0042995,GO:0043113,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0046483,GO:0046907,GO:0046939,GO:0048513,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051668,GO:0051716,GO:0055086,GO:0060322,GO:0060830,GO:0060972,GO:0065007,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0072657,GO:0090407,GO:0099111,GO:0120025,GO:0120036,GO:0120038,GO:1901293,GO:1901360,GO:1901362,GO:1901576,GO:1990823,GO:1990830
Exons5
EggNOG free text desc.Nucleoside diphosphate kinase
EggNOG OGsCOG0105@1,KOG0888@2759
Ec32 ortholog descriptionNucleoside diphosphate kinase
Ec32 orthologEc-11_005170.1
EC2.7.4.6
Cds size360
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15987.4388.1prot_Ecto-sp13_S_contig15987.4388.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15987 1406..2900 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462844.6969876-UTR-Ecto-sp13_S_contig15987:892..14051681462844.6969876-UTR-Ecto-sp13_S_contig15987:892..1405Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15987 893..1405 -
1681462844.7457063-UTR-Ecto-sp13_S_contig15987:2900..29181681462844.7457063-UTR-Ecto-sp13_S_contig15987:2900..2918Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15987 2901..2918 -
1681462844.7550766-UTR-Ecto-sp13_S_contig15987:3192..33041681462844.7550766-UTR-Ecto-sp13_S_contig15987:3192..3304Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15987 3193..3304 -
1681462844.7643712-UTR-Ecto-sp13_S_contig15987:3927..40191681462844.7643712-UTR-Ecto-sp13_S_contig15987:3927..4019Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15987 3928..4019 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462844.7130935-CDS-Ecto-sp13_S_contig15987:1405..16421681462844.7130935-CDS-Ecto-sp13_S_contig15987:1405..1642Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15987 1406..1642 -
1681462844.7276893-CDS-Ecto-sp13_S_contig15987:2231..22971681462844.7276893-CDS-Ecto-sp13_S_contig15987:2231..2297Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15987 2232..2297 -
1681462844.7366626-CDS-Ecto-sp13_S_contig15987:2843..29001681462844.7366626-CDS-Ecto-sp13_S_contig15987:2843..2900Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15987 2844..2900 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15987.4388.1

>prot_Ecto-sp13_S_contig15987.4388.1 ID=prot_Ecto-sp13_S_contig15987.4388.1|Name=mRNA_Ecto-sp13_S_contig15987.4388.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp
MESFRLTRTQAQEFFEVYQGVIPKYTEVLDEMTTGTCVALEIRGQNVVGA
FREAAGPWDVEMAKELRPNSIRGMFGERAKDSSGGGARTGVHCTDLPEDG
PSECRYFFELMQQGGGSAP*
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mRNA from alignment at Ecto-sp13_S_contig15987:893..4019-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15987.4388.1 ID=mRNA_Ecto-sp13_S_contig15987.4388.1|Name=mRNA_Ecto-sp13_S_contig15987.4388.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3127bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15987:893..4019- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCAGTCCGACGGCGTGTGGTGCTGCGGATCGGAGCAACAGGGCGCCAA
TCTGGAGAGTCTCTTCGCACCTGGTGGGGCGGTTTCGAGAGGGTGAGTAA
CCCAACCCCGCCCCCCAAAGAGGTACACCATCTCGCCAGGGACGAACCTA
AATCCGGTTCATTACCAAGCGCGAGCGAGAAGAATAACGACTGTTGGTTC
TTCGCTGCTTGTATGCTAGGGCCCGATTCGTCCCTGACTACGTCGGAGGT
GGGGGTCCGTCGGAGGTGGGGGTGGGGGGAGGGCGTCAAAGCCCGAGCGA
TTGCTAAAACAACGAAAAGGGAAGCTGACGCCGGCAGCGGGTGAAGGTTG
TAGCACTGTTTGCGCATCAGCTGAGAACGTCCGCGTTCTTCGCCGCAACC
TACAGAGGACTGTGGTTGGCGCGTGCCGTCGTAGTGTGGATCAGATTCCT
GGTAGATATCTTGCCGCCATTGTTGTAGTCGCCGCTTGGTTGTGGTGGTT
GTTGTTGTTGCTGTCGTCGCCTTGTATTGTGAGTGCGTGCCTGATTGCGC
GTTGTTGTTCTTCCTCCTTGTCTACTCCCATGCTCACGCTTGTTCCTTTT
CTTGGCGTGATTTGTCAACGTGCACGCGCGCGCCACCAACGCCGCGGGTG
CGGGGGTTTACGACATGAAACGGCGTTTGGTCCGTCTGGTCCGGCGTCGC
CCTTGCTTCTGCCAGGAAAGGAGGGGGCGCCACGGCTACGTTCGACAGCT
GCACCTGCTGCGTGATCAAACCGCACGCGGTGAAGGCGGGCAACGCGGGC
AAGATCATCGACAAGATTCTGAATCAGGTTCGCGGTGTTTCGGTTCTTCG
TGACGCCGTGGACACACACCTCTCTTCCCTAAGCAAGCCGTCGTTGTCCC
CGGGTCTCCCCTTTTCTTGACCCAGGCAGCTTGAGTACCCTCCCGCGATG
CTCGAAACACCACCGTGGAGTAACCCTGTTGTTGATCCCGTTTGCTTTTT
ACGTTGCCGTTCTTTCTTTGTACCGTCACTAACCCCATGAGTCCGATTTA
ACAATTCGTCTACCCTTTTCTGGGCAATATCTTGACGCACCGAACAATCA
GGGATTCGAAATTTCCGCGATGGAATCCTTCCGGCTCACCCGGACACAAG
CGCAGGAGTTTTTCGAGGTCTACCAGGTACGGTCGGGCCGTTGTCAGGTC
TTAGCTGCGGCAAAAACCACGAAGGTTGGAGCGACGGGTAAAGGTTGAGC
CTGGTCAAAGGCGGAGGCAAGGGGAGATTGTTTCGAGACGTCTCAACTGG
CGGTCTTTCTGAGGACGAGGGAGTTGGTACGGCGACCCTAGCGAAGGAAT
GGGTCTAGCTTTAGGGGTATTTTCTTCCTTAGGGTGGGGCTGACCCGAAT
GCTACCTCCCAGTGGCAGCCTCCCTCGTAAAACCTTGAGGTAGGTGGACG
ATTCTTGGCGTCGGTTGAATTTTAGGTGCGAACGATTAGAGTATGTGCAT
GATGTCAAACAAAGCGAACTGCGGCAACGATCTTCCTTGCTGTTGTATTT
TTTGTTTTGTGAATTTGGTAGTTTATGGCCACTCTACGTGCATGCTATGG
TCGTTCGTAACTCCGCCCCGTGCACATATCTATCCATGTGCTTCTTTTCC
CCCCGCGTCGTTTGTGTTGGTGCGCTTGTTTTCGTGATGGTGACGTTCGA
TGGAATTAATCGAATCCGCAAGGGAGTGATCCCCAAGTACACCGAGGTGT
TGGACGAAATGACGACCGGAACCTGCGTGGCCTTAGAGGTGAGCAGGGAG
AGCAACACCAGCCCCCAGTTTCGCCCCCTACCCCCCCACGACGCGCACGC
TCCGCGACACGTCTCGCGCATCACGATCACAATCGAATCCCGGTAAAGCT
TTCGTTCGTTATCCCACCGCATCACGATGACCGCGTTTTCGCGTACATTT
TTCCAAACGACAGCTTCATGTCGTGATCATGAGGCCTCTCGTGGCAACGC
GCAACCACGGCGCGGCCCAAACCTGCCTGCTTGCCCGAACACCGTGCATG
CTCGGCGTCTTGCCATGGGTATGTCGAAGAAGTTTCCTGCACAACTCCTC
GCGCCCCTTCGTCGCGAGGGAGGGACAGCTACATATTTCCCCCGGGCTAG
TCTTGGGGTCACTCTCTTCGCTTGTTTTCCTCAGGTCACCTCGTTGTGGT
TGATTTTGTGGGACCGGCAGGCAGGCCCTCTCTCCGATTCCTGTATCCAT
AACCACTGATTTTCGATTCTTGCCGCCGCCACTAGCCAGTGAGTGCCCCG
TGATGATAGTTATTAAATACTCCTTGGCATCGCTCCCCTCTTGTGCTGCT
GAAAACGTTTTGGTGGCGACGGGATAGATTCGGGGGCAGAATGTCGTGGG
CGCCTTCCGCGAGGCCGCCGGCCCGTGGGACGTGGAGATGGCCAAGGAGC
TGAGGCCGAACTCCATCCGCGGGATGTTCGGGGAGAGGGCCAAGGACTCC
TCCGGTGGGGGAGCACGGACCGGGGTGCACTGCACCGACTTACCCGAGGA
CGGGCCTTCGGAATGCCGCTACTTTTTCGAGCTGATGCAGCAGGGTGGTG
GCAGTGCTCCTTGATTCAATTGTCGAAGAAGTGTGGTGAAATTCTTTCGC
GGAAAGCATCCGAAAGCAGGCCTTTGGTTGGTTGGGACCATTTTGGGGAT
CCCCTCTTGCTTTGCTTCGCTGGATGGCAACAACAGCGAGCAACGCGAAG
TCCATCTGACGGAGAGGTAGTGTTGGGTTTCCATGATTCACTTCTCGCGC
TCGTGATTTGAAGAAGAGACGCCCAAAAGAACTGTCATCAACTTCGATAC
GATCGCCGAACCGTGCTAAGGTCACCTACGTCCTCCTTTTCTCCATCGGC
TCTTTTTCCTTCTTTATTTTTCGGTGACAGTCAACCGCGGTGTGGACTAT
TCCAACCGTGGCTATTTGTACGGAGGTTGACCAGCTACCCGCGCCCTTTG
GTTTATGCCTACCTTCACCTACCCAAACATTTATCCAAGAACCCGTCCGT
GCGGGGAATGTCAGAGAAACAGAGCGACAGCCGTGGTTCATTGTTGGTTG
CACGCACACACACGCCCCCATAGTTCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15987:893..4019-

>mRNA_Ecto-sp13_S_contig15987.4388.1 ID=mRNA_Ecto-sp13_S_contig15987.4388.1|Name=mRNA_Ecto-sp13_S_contig15987.4388.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=360bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15987:893..4019- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAATCCTTCCGGCTCACCCGGACACAAGCGCAGGAGTTTTTCGAGGT
CTACCAGGGAGTGATCCCCAAGTACACCGAGGTGTTGGACGAAATGACGA
CCGGAACCTGCGTGGCCTTAGAGATTCGGGGGCAGAATGTCGTGGGCGCC
TTCCGCGAGGCCGCCGGCCCGTGGGACGTGGAGATGGCCAAGGAGCTGAG
GCCGAACTCCATCCGCGGGATGTTCGGGGAGAGGGCCAAGGACTCCTCCG
GTGGGGGAGCACGGACCGGGGTGCACTGCACCGACTTACCCGAGGACGGG
CCTTCGGAATGCCGCTACTTTTTCGAGCTGATGCAGCAGGGTGGTGGCAG
TGCTCCTTGA
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