mRNA_Ecto-sp13_S_contig15967.4380.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: D7FT91_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT91_ECTSI) HSP 1 Score: 313 bits (803), Expect = 2.260e-100 Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 1
Query: 1 MVSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLS 483
MVSRRCTQKAR IFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLV+ALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWR RLRSALLS
Sbjct: 380 MVSRRCTQKARGIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVVALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRTRLRSALLS 540
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A7S2EB38_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB38_TRICV) HSP 1 Score: 182 bits (462), Expect = 6.900e-53 Identity = 93/160 (58.13%), Postives = 113/160 (70.62%), Query Frame = 1
Query: 4 VSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLS 483
VSRR + FLREIN GGL +LNELLL++ GI RVL L A + HPVA YCTAGKDRTG++ A+ L+VLGVPDE IV+DY S + Y ++ D AMVGAL+Q+ LDP TFLGAPP VM L +R YGS++ YLD IGFD R +LR ALL+
Sbjct: 83 VSRRARDDIKAPFLREINDGGLSMLNELLLRFGAPGIKRVLDLCADRSRHPVAFYCTAGKDRTGMITAIILSVLGVPDEDIVEDYGLSANVYAEMNDHKAMVGALSQRSLDPKTFLGAPPQVMRDTLVALRENYGSVEGYLDWIGFDEVSREKLRRALLN 242
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A836CH30_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH30_9STRA) HSP 1 Score: 185 bits (470), Expect = 8.540e-53 Identity = 96/158 (60.76%), Postives = 111/158 (70.25%), Query Frame = 1
Query: 4 VSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSAL 477
VSRR A ++ L I AGGL LLNE+LL G I R L+L+A + HPVALYCTAGKDRTGLV AL L+ GV D AIV DYAKSD+AY QL D+ AMV AL Q DLD + FL APP VM L +R ++G +D YLD IGFDA WRARLR+AL
Sbjct: 190 VSRRARAHATEVLLERIKAGGLPLLNEMLLLQGGPQIARALKLIADADRHPVALYCTAGKDRTGLVAALALSAAGVDDAAIVADYAKSDAAYAQLEDKRAMVAALDQHDLDSEKFLRAPPEVMVATLAGLRARHGGVDAYLDGIGFDAAWRARLRAAL 347
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A7R9WFP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WFP7_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.430e-52 Identity = 86/147 (58.50%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 1 MVSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGF 441
+VSRR K +D+FL EIN GGL +LNELLL+Y GI VL + + HPVA YCTAGKDRTG++ A+ L+ LGVPDE+IV+DY+ S + Y ++ D AMVGAL+Q++LDP TFLGAPPHVM L IR YGS++ YLD IGF
Sbjct: 9 VVSRRARHKVKDVFLSEINGGGLPMLNELLLKYGAPGIRYVLEVCSDTSRHPVAFYCTAGKDRTGVIAAVLLSALGVPDESIVEDYSLSANVYAEMDDHTAMVGALSQRNLDPKTFLGAPPHVMRDTLVAIRENYGSVEGYLDWIGF 155
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A7S1VXA0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXA0_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.440e-52 Identity = 94/160 (58.75%), Postives = 116/160 (72.50%), Query Frame = 1
Query: 1 MVSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALL 480
+VS+R +K +D+FL EIN GGL +LNELLLQ+ GI VL + A K HPV YCTAGKDRTG++ AL L+VLGVPDE IV+DY+ S + Y ++ D AMVGAL+Q++LDP TFLGAPP VM L IR YGS+D YLD IGF E R +L+ ALL
Sbjct: 330 IVSKRAREKVKDVFLDEINDGGLPMLNELLLQFGAPGIRYVLEICADKTRHPVGFYCTAGKDRTGMITALILSVLGVPDEDIVEDYSLSANVYAEMNDHKAMVGALSQRNLDPKTFLGAPPSVMRDTLAGIRETYGSVDGYLDYIGFGEESRKKLKEALL 489
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A7S2I2F6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2F6_9STRA) HSP 1 Score: 184 bits (467), Expect = 5.660e-51 Identity = 91/161 (56.52%), Postives = 118/161 (73.29%), Query Frame = 1
Query: 1 MVSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSALLS 483
+VS+R + +D+FL EIN GGL +LNELLL++ GI VL L A K HP+A YCTAGKDRTG++ AL L+++GVPDE IV+DY+ S + Y ++ D AMVGAL+Q++LDP TFLGAPP VM +L IR YGS++ YLD IGF E R +L+ ALLS
Sbjct: 326 IVSKRERTRVKDVFLDEINDGGLPMLNELLLRFGAPGIKYVLDLCADKSRHPIAFYCTAGKDRTGMIAALILSLIGVPDEDIVEDYSLSANVYAEMNDHKAMVGALSQRNLDPKTFLGAPPSVMREILEGIRENYGSVEGYLDYIGFGEESREKLKDALLS 486
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A7S2UX35_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX35_9STRA) HSP 1 Score: 182 bits (461), Expect = 5.940e-51 Identity = 92/159 (57.86%), Postives = 116/159 (72.96%), Query Frame = 1
Query: 1 MVSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSAL 477
+VS R ++AR + L+++N GGL LLNELLL SG G+ R L++LA+ E PVA++CTAGKDRTG + L L++LGV EAIV DY SD+AY L D+ AMVGAL Q+DLDPD FL AP +V E L I +YGS++ YLDSIGFD EWR +LR AL
Sbjct: 236 VVSTRAYKRARSLVLKKVNEGGLGLLNELLLSKSGKGVCRTLKILATPERLPVAIHCTAGKDRTGFIAMLVLSMLGVEREAIVADYTLSDTAYADLNDKAAMVGALKQEDLDPDIFLCAPSYVCEDTLNLIDAQYGSVEKYLDSIGFDKEWREKLRLAL 394
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A7S2VXM8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VXM8_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.420e-50 Identity = 89/159 (55.97%), Postives = 115/159 (72.33%), Query Frame = 1
Query: 1 MVSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSAL 477
+VSRR +D+FL EIN GGL++LNELLL++ GI VL++ A + HPV YCTAGKDRTG + A+ LA++GVPDE I++DY+ S + Y ++ D AMVGAL+Q++LD TFLGAPPHVM L IR YGSI+ YLD IGFD E R +L+ AL
Sbjct: 307 IVSRRVRTGVKDVFLDEINQGGLIMLNELLLRFGAPGIKYVLQICADETRHPVGFYCTAGKDRTGAIAAIILALMGVPDEDIIEDYSLSANVYAEMNDHKAMVGALSQRNLDAKTFLGAPPHVMRDTLVSIRKNYGSIEGYLDFIGFDEEQREKLKKAL 465
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A4D9D8L3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8L3_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.530e-50 Identity = 92/158 (58.23%), Postives = 111/158 (70.25%), Query Frame = 1
Query: 4 VSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSAL 477
VS+R ++AR IFL IN GL LLN+LLL YSG + RVL LL+ KE +P+ALYCTAGKDRTGLVI L LA LGV AI +DY SD+AY L+D AMVGAL Q +LDP+ FL AP V+E L +I K+GSI+ YLD IGF + R L+ AL
Sbjct: 79 VSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGPALRRVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDSGAIAEDYVLSDTAYADLSDAKAMVGALEQNNLDPEKFLRAPRSVIEHTLAYIEKKFGSIEGYLDQIGFTEDKRVALKKAL 236
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Match: A0A7S1H7P6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H7P6_HEMAN) HSP 1 Score: 175 bits (443), Expect = 3.950e-50 Identity = 91/151 (60.26%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 25 KARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAGKDRTGLVIALTLAVLGVPDEAIVDDYAKSDSAYKQLADRDAMVGALAQQDLDPDTFLGAPPHVMEGVLRFIRVKYGSIDDYLDSIGFDAEWRARLRSAL 477
+AR +FL INA GL LLNEL+L Y G I VL +LA +HPVA YCTAGKDRTGLV L L+ LGV DE+IV+DY SDS Y L D+DAMVGAL QQ LDP+ FL AP VME +R +R +YG + YLD IGF + R RLRSAL
Sbjct: 84 RARKVFLDYINAAGLPLLNELILDYGGASIKAVLDVLADSSNHPVAFYCTAGKDRTGLVAMLVLSTLGVDDESIVNDYVISDSVYADLNDKDAMVGALQQQQLDPERFLRAPRSVMESTMRLLREEYGGPEAYLDKIGFGPDDRQRLRSAL 234 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15967.4380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15967.4380.1 >prot_Ecto-sp13_S_contig15967.4380.1 ID=prot_Ecto-sp13_S_contig15967.4380.1|Name=mRNA_Ecto-sp13_S_contig15967.4380.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp MVSRRCTQKARDIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHback to top mRNA from alignment at Ecto-sp13_S_contig15967:421..3227+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15967.4380.1 ID=mRNA_Ecto-sp13_S_contig15967.4380.1|Name=mRNA_Ecto-sp13_S_contig15967.4380.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2807bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15967:421..3227+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15967:421..3227+ >mRNA_Ecto-sp13_S_contig15967.4380.1 ID=mRNA_Ecto-sp13_S_contig15967.4380.1|Name=mRNA_Ecto-sp13_S_contig15967.4380.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15967:421..3227+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |