prot_Ecto-sp13_S_contig15964.4379.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15964.4379.1
Unique Nameprot_Ecto-sp13_S_contig15964.4379.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length305
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15964.4379.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.550e-6
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 QGKYEEAGALYRRAIAIEEKALGLDHPTLAKTLNNRANALQEQ 43
            QGKY EA  LY R+ AI+EK LGL+HP +A +LNNR   L+ Q
Sbjct:   18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15964.4379.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 7.590e-6
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:    1 QGKYEEAGALYRRAIAIEEKALGLDHPTLAKTLNNRA 37
            QGKYEEAG LY R++AI EK LG DHP +A++LNNRA
Sbjct:  798 QGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRA 834
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15964.4379.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 7.880e-6
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    1 QGKYEEAGALYRRAIAIEEKALGLDHPTLAKTLNNRANALQEQ 43
            QGKY+EAG LY R++AI EKALG DHP +A++LNN A  L+ Q
Sbjct:  831 QGKYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWAVLLESQ 873
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15964.4379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K3K8_9PHAE3.550e-658.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJK0_9PHAE7.590e-670.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4D0_9PHAE7.880e-662.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 154..174
score: 50.0
coord: 110..127
score: 38.33
coord: 45..63
score: 34.74
coord: 23..42
score: 25.5
coord: 189..210
score: 41.82
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 156..189
e-value: 0.21
score: 20.7
coord: 248..281
e-value: 16.0
score: 13.1
coord: 30..63
e-value: 0.0022
score: 27.2
coord: 114..147
e-value: 0.12
score: 21.5
coord: 72..105
e-value: 360.0
score: 1.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..119
e-value: 3.1E-38
score: 133.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 127..304
e-value: 8.1E-42
score: 144.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 27..279
NoneNo IPR availablePFAMPF13424TPR_12coord: 74..145
e-value: 1.1E-14
score: 54.4
coord: 1..62
e-value: 5.5E-14
score: 52.2
coord: 155..209
e-value: 3.3E-9
score: 36.9
coord: 219..279
e-value: 4.5E-12
score: 46.1
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 84..207
coord: 219..304
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..94
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..94
coord: 219..304
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 84..207
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..189
score: 18.389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15964contigEcto-sp13_S_contig15964:299..3296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15964.4379.1mRNA_Ecto-sp13_S_contig15964.4379.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15964 299..3296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15964.4379.1 ID=prot_Ecto-sp13_S_contig15964.4379.1|Name=mRNA_Ecto-sp13_S_contig15964.4379.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
QGKYEEAGALYRRAIAIEEKALGLDHPTLAKTLNNRANALQEQGKYGEAD
PLYKRVIDINEKALGPEHPEVVRGLNNRVTGLEAQGNYEEADALRVRVIE
IEEKELGSDNPQLSRTLNNRARSLQARGKYEEADALYRRAVDIYDKAPGP
DNPEVITALNNWGLMLQAQSKYEEADSLYLRAIEISEKLLGPDDLEVAKS
INTRAYAARLLCAMDTPIQDKHEEADALYLRAFEIREKALGPDDPRLAES
LNNRVFALLAQGNHAEAKPLLERTLAIRRNALGEEHEDTVSSSKALKALN
ASQG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom