prot_Ecto-sp13_S_contig15960.4374.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15960.4374.1
Unique Nameprot_Ecto-sp13_S_contig15960.4374.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length401
Homology
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: D7G6J3_ECTSI (Similar to ring finger protein 167 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J3_ECTSI)

HSP 1 Score: 571 bits (1472), Expect = 1.260e-201
Identity = 342/412 (83.01%), Postives = 347/412 (84.22%), Query Frame = 0
Query:    6 QISTSFLFNSTLILLGFVWCGVTFARLVCVHRARESALSGAHFSERRGGRGDQPGAGLTGTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKLVGGGGDMDVEKGWGVGGPGKGTEPAVVGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSAESKAGLLGSSAAPVRSLRRWLRNHERGPGAAVAQTAPPGGPTGGRVEMGSGGATSGVPSEPVVARMSGLVGGGSXXXFGGVDVTPDGGSSSE----------------MVVTLEEXXXXXXXXXXXXXXXXXXPTSTAPGVASLLPLLPPAAVAGHEANPTATSPAPAGGAEAFPXXXXXXXXX-GDEQSVGGPTHVHPAAVAAVDVPHPLSVSASRFEERASATTTA 400
            QISTSFLFNSTLILLGFVWCGVTFARLVCVHRARESALSGAHFS+RRGGRGDQ GAG TGTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKL GGGGDMDVEKGWGVGGPGKGTEPA  GEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPS ESKAGL+GSSA PVRSLRRWLRNHERGPGA VAQTAPPGGPTGG VEMGSGGATSGV SEPVVAR SGLVGGGSXXXFGGVDV  DGG +                         XXXXXXXXXXXXXXXXXX      GVASLLP+LP   VAGHEANP A             XXXXXXXXX GDEQSVGGPT VHPAAVAAVDVP PLSVSASRFEERASA+TTA
Sbjct:   20 QISTSFLFNSTLILLGFVWCGVTFARLVCVHRARESALSGAHFSDRRGGRGDQTGAGFTGTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKLAGGGGDMDVEKGWGVGGPGKGTEPAAAGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKAGLVGSSAVPVRSLRRWLRNHERGPGAVVAQTAPPGGPTGGEVEMGSGGATSGVLSEPVVARTSGLVGGGSXXXFGGVDVAADGGDADRPRAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVASLLPVLPXXXVAGHEANPAAXXXXXXXXXXXXXXXXXXXXXXXGDEQSVGGPTDVHPAAVAAVDVPDPLSVSASRFEERASASTTA 431          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: A0A6H5JXB7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXB7_9PHAE)

HSP 1 Score: 572 bits (1474), Expect = 7.270e-199
Identity = 341/420 (81.19%), Postives = 347/420 (82.62%), Query Frame = 0
Query:    1 EQPVQQISTSFLFNSTLILLGFVWCGVTFARLVCVHRARESALSGAHFSERRGGRGDQPGAGLTGTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKLVGGGGDMDVEKGWGVGGPGKGTEPAVVGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSAESKAGLLGSSAAPVRSLRRWLRNHERGPGAAVAQTAPPGGPTGGRVEMGSGGATSGVPSEPVVARMSGLVGGGSXXXFGGVDVTPDGGSSSE--------------------MVVTLEEXXXXXXXXXXXXXXXXXXPTSTAPGVASLLPLLPPAAVAGHEANPTATSPAPAGGAEAFPXXXXXXXXXGDEQSVGGPTHVHPAAVAAVDVPHPLSVSASRFEERASATTTA 400
            ++ V QIS+SFLFNSTL+LLGFVWCGVTFARLVCVHRARESALSGAH S+RRGGRGDQ GAGLT TGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKLVGGGGDMDVEKGWGV GPGKGTEPAV GEGVEEEA CAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPS ESK G LGSSAAP RS+RRWLRNHERGPGAAVAQTAP GGP GG VEMGSGG T GV SEPVVA MSGLVG GS XX   V V  DGG                               XXXXXXXXXXXXXXXXX PTSTAPGVASLLPLLPPAAVAGHEANPTATS           XXXXXXX  GDEQSVGGPTHVHPAAVAAVDVP PLSVSASRFEERASATTTA
Sbjct:  217 KRTVDQISSSFLFNSTLVLLGFVWCGVTFARLVCVHRARESALSGAHLSDRRGGRGDQTGAGLTLTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKLVGGGGDMDVEKGWGVSGPGKGTEPAVAGEGVEEEAMCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESKVGPLGSSAAPFRSVRRWLRNHERGPGAAVAQTAPSGGPPGGGVEMGSGGETGGVLSEPVVASMSGLVGDGSGXXXXXVGVAADGGDPDRPRAASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTSTAPGVASLLPLLPPAAVAGHEANPTATSXXXXX--XXXXXXXXXXXAAGDEQSVGGPTHVHPAAVAAVDVPDPLSVSASRFEERASATTTA 634          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: UPI000901B6F1 (E3 ubiquitin-protein ligase At1g63170-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI000901B6F1)

HSP 1 Score: 80.1 bits (196), Expect = 9.650e-13
Identity = 51/114 (44.74%), Postives = 63/114 (55.26%), Query Frame = 0
Query:   86 SLEQTNVLPKHRRFGSKLVGGGGDMDVEKGWGVGG-PGKGTEPAVVGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSAESKAGLLGS 198
            S E  N LP+++ F SK  G G   D E G   GG    GTE   V  G  E+A C ICL + ED  +LR LPC HFFHA CVD WL  + +CP CK  +E  + +S +   GS
Sbjct:  307 SEESINALPRYK-FKSKRNGSGIRGDNETGVEEGGFLAAGTEKERVISG--EDAVCCICLSKYEDNDELRELPCSHFFHAECVDKWLKINASCPLCKFEIEVENEDSSSPAEGS 417          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: A0A7S3V245_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V245_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.400e-12
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 0
Query:  136 EEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSAESKAGLLGSSAAPVRSLRRWLRNHERGP 217
            E  TCAIC+C+ E+G  +R+LPC H+FHA C+DVWL ++  CP CK+ +     + K  +      PV  +  + R   R P
Sbjct:  632 ESDTCAICICDYEEGDQVRLLPCQHYFHAECIDVWLRKNKACPMCKRDIVEGLEQGKEVVQSGVIVPVADMAPYNRRRRRRP 713          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: A0A5J9V0K8_9POAL (RING-type domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V0K8_9POAL)

HSP 1 Score: 77.0 bits (188), Expect = 2.920e-12
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  135 EEEATCAICLCEEEDGQDLRVLP-CGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSAESKAGLLGSSAAPV 203
            ++EA CA+CL + EDG+  R LP CGH FHAGCVD+WLA   TCP C+  +  P     A  L  +  PV
Sbjct:  135 DDEAKCAVCLAKLEDGEAARFLPRCGHGFHAGCVDMWLASHTTCPLCRLTIAKPDVTLPASALAPALPPV 204          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: A0A5J9V187_9POAL (RING-type domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V187_9POAL)

HSP 1 Score: 77.0 bits (188), Expect = 4.610e-12
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  135 EEEATCAICLCEEEDGQDLRVLP-CGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSAESKAGLLGSSAAPV 203
            ++EA CA+CL + EDG+  R LP CGH FHAGCVD+WLA   TCP C+  +  P     A  L  +  PV
Sbjct:  183 DDEAKCAVCLAKLEDGEAARFLPRCGHGFHAGCVDMWLASHTTCPLCRLTIAKPDVTLPASALAPALPPV 252          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: A0A5B6ZQU2_DAVIN (RING-type domain-containing protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZQU2_DAVIN)

HSP 1 Score: 75.1 bits (183), Expect = 6.140e-12
Identity = 40/97 (41.24%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   88 EQTNVLPKHRRFGSKLVGGGGDMDVEKGWGVGG---PGKGTEPAVVGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCK 181
            E  N LP ++    K+   GGD ++  G G GG    G   E A+ G    E+A C ICL +  D  ++R LPC HFFH  CVD WL  + +CP CK
Sbjct:   91 ESINALPTYKFMLKKI---GGDQEINSGGGEGGVLAAGTENERAISG----EDAVCCICLAKYADNDEVRELPCSHFFHVECVDKWLKINASCPLCK 180          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: A0A5B6ZMS8_DAVIN (RING-type domain-containing protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZMS8_DAVIN)

HSP 1 Score: 77.0 bits (188), Expect = 9.890e-12
Identity = 42/100 (42.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:   88 EQTNVLPKHRRFGSKLVGGGGDMDVEKGWGVGG---PGKGTEPAVVGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPV 184
            E  N LP ++    K+   GGD ++  G G GG    G   E A+ G    E+A C ICL +  D  +LR LPC HFFH  CVD WL  + +CP CK  V
Sbjct:  302 ESINALPTYKFMLKKI---GGDQEINSGGGEGGVLAAGTENERAISG----EDAVCCICLAKYADNDELRELPCSHFFHVECVDKWLKINASCPLCKSEV 394          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: A0A5B6ZMY7_DAVIN (RING-type domain-containing protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZMY7_DAVIN)

HSP 1 Score: 75.9 bits (185), Expect = 1.230e-11
Identity = 41/100 (41.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:   88 EQTNVLPKHRRFGSKLVGGGGDMDVEKGWGVGG---PGKGTEPAVVGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPV 184
            E  N LP ++    K+   GGD ++  G G GG    G   E A+ G    E+A C ICL +  D  ++R LPC HFFH  CVD WL  + +CP CK  V
Sbjct:  203 ESINALPTYKFMLKKI---GGDQEINSGGGEGGVLAAGTENERAISG----EDAVCCICLAKYADNDEVRELPCSHFFHVECVDKWLKINASCPLCKSEV 295          
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Match: A0A0D3BLT7_BRAOL (RING-type domain-containing protein n=9 Tax=Brassica TaxID=3705 RepID=A0A0D3BLT7_BRAOL)

HSP 1 Score: 76.6 bits (187), Expect = 1.280e-11
Identity = 51/138 (36.96%), Postives = 67/138 (48.55%), Query Frame = 0
Query:   79 LTPAQIRSLEQTNVLPKHRRFGSKLVGGGGDMDVEKGWGVGGPGKGTEPAVVGEGVEEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPV-EPPSAESKAGLLGSSAAPVRSLRRWLRNHER 215
            LT  +  + E  N LP H+ F  K    GG    E G  V   G   E A+ G    E+A C ICL +  + ++LR LPC HFFH  CVD WL  + +CP CK  V E  S  +  G+L S ++      +  RN  R
Sbjct:  269 LTQPRGATTESINALPTHK-FKLKKSRSGGSSSSEGG--VVAAGTDNERAISG----EDAVCCICLAKYANNEELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGEKNSDLTSQGVLTSLSSGEEGNAQQQRNEHR 399          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15960.4374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6J3_ECTSI1.260e-20183.01Similar to ring finger protein 167 isoform 1 n=1 T... [more]
A0A6H5JXB7_9PHAE7.270e-19981.19RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI000901B6F19.650e-1344.74E3 ubiquitin-protein ligase At1g63170-like n=2 Tax... [more]
A0A7S3V245_9STRA2.400e-1239.02Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A5J9V0K8_9POAL2.920e-1248.57RING-type domain-containing protein (Fragment) n=1... [more]
A0A5J9V187_9POAL4.610e-1248.57RING-type domain-containing protein (Fragment) n=1... [more]
A0A5B6ZQU2_DAVIN6.140e-1241.24RING-type domain-containing protein (Fragment) n=1... [more]
A0A5B6ZMS8_DAVIN9.890e-1242.00RING-type domain-containing protein n=1 Tax=Davidi... [more]
A0A5B6ZMY7_DAVIN1.230e-1141.00RING-type domain-containing protein (Fragment) n=1... [more]
A0A0D3BLT7_BRAOL1.280e-1136.96RING-type domain-containing protein n=9 Tax=Brassi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 140..180
e-value: 1.9E-8
score: 44.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 139..181
e-value: 6.4E-13
score: 48.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 140..181
score: 12.401
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 139..181
e-value: 0.0064
score: 8.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 129..197
e-value: 3.4E-19
score: 69.8
NoneNo IPR availablePANTHERPTHR45798FAMILY NOT NAMEDcoord: 19..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..400
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 133..187
NoneNo IPR availableTMHMMTMhelixcoord: 11..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15960contigEcto-sp13_S_contig15960:1937..3787 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15960.4374.1mRNA_Ecto-sp13_S_contig15960.4374.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15960 1937..3787 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15960.4374.1 ID=prot_Ecto-sp13_S_contig15960.4374.1|Name=mRNA_Ecto-sp13_S_contig15960.4374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=401bp
EQPVQQISTSFLFNSTLILLGFVWCGVTFARLVCVHRARESALSGAHFSE
RRGGRGDQPGAGLTGTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFG
SKLVGGGGDMDVEKGWGVGGPGKGTEPAVVGEGVEEEATCAICLCEEEDG
QDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSAESKAGLLGSSA
APVRSLRRWLRNHERGPGAAVAQTAPPGGPTGGRVEMGSGGATSGVPSEP
VVARMSGLVGGGSGGGFGGVDVTPDGGSSSEMVVTLEEEEEQEQGQGEPL
AAAAAAPTSTAPGVASLLPLLPPAAVAGHEANPTATSPAPAGGAEAFPAA
AAAAAAAGDEQSVGGPTHVHPAAVAAVDVPHPLSVSASRFEERASATTTA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD