prot_Ecto-sp13_S_contig1596.4372.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1596.4372.1
Unique Nameprot_Ecto-sp13_S_contig1596.4372.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length66
Homology
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Match: A0A6H5L1F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F3_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.510e-34
Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = 0
Query:    1 LAALKQYVLKQRVFYVLIHTGRRHDAELADEDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 65
            L ALKQYVLKQRVFYVLIHT RRHDAELAD+DMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD
Sbjct:  223 LTALKQYVLKQRVFYVLIHTDRRHDAELADKDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 287          
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Match: A0A6H5LG80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG80_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.010e-24
Identity = 51/65 (78.46%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 LAALKQYVLKQRVFYVLIHTGRRHDAELADEDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 65
            L ALKQ+VLK+RVFYVLI   RR  A+  DEDMSSDVILLA+GVSPATGNLVGVIAIQ  HNLCD
Sbjct:  165 LTALKQHVLKRRVFYVLIRADRRQYADPDDEDMSSDVILLAMGVSPATGNLVGVIAIQAYHNLCD 229          
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Match: A0A4Q6DF08_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6DF08_9PROT)

HSP 1 Score: 68.2 bits (165), Expect = 2.300e-12
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    2 AALKQYVLKQRVFYVLIHTGRRHDAELADEDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 65
            +AL+ YVL   +FY+LIH   +      D   S  V+L ALGVSPATGNLVG ++ Q CHNLCD
Sbjct:  157 SALRSYVLSHHLFYILIHDKPK---PYEDFMFSQLVLLFALGVSPATGNLVGAVSSQVCHNLCD 217          
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Match: UPI001CC0B2F1 (hypothetical protein n=1 Tax=Gordonia bronchialis TaxID=2054 RepID=UPI001CC0B2F1)

HSP 1 Score: 61.6 bits (148), Expect = 4.610e-10
Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    4 LKQYVLKQRVFYVLIHTGR-RHDAELADEDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 65
            LK +V+   + YVLIH  R +HD    D   S  V+L A+GVSP TGNL+GV+  Q CHNLCD
Sbjct:  129 LKSHVIDGHLTYVLIHEPREQHD----DFWFSEWVMLFAVGVSPVTGNLIGVVGHQVCHNLCD 187          
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Match: D0L311_GORB4 (Uncharacterized protein n=1 Tax=Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / BCRC 13721 / JCM 3198 / KCTC 3076 / NBRC 16047 / NCTC 10667) TaxID=526226 RepID=D0L311_GORB4)

HSP 1 Score: 61.6 bits (148), Expect = 1.570e-9
Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    4 LKQYVLKQRVFYVLIHTGR-RHDAELADEDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 65
            LK +V+   + YVLIH  R +HD    D   S  V+L A+GVSP TGNL+GV+  Q CHNLCD
Sbjct:  297 LKSHVIDGHLTYVLIHEPREQHD----DFWFSEWVMLFAVGVSPVTGNLIGVVGHQVCHNLCD 355          
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Match: A0A1X6NUI1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUI1_PORUM)

HSP 1 Score: 60.8 bits (146), Expect = 1.640e-9
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    1 LAALKQYVLKQRVFYVLIHTGRRHDAELADEDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 65
            L AL+ YV+ + V++V++HT      E    ++   V+L A+GVSPA+GNLVG   +Q CHNLCD
Sbjct:  174 LDALRSYVVDRHVYFVVVHTPLVGQEEFPFPNL---VLLWAVGVSPASGNLVGAWGVQFCHNLCD 235          
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Match: A0A847G515_9CHLR (Uncharacterized protein n=1 Tax=Leptolinea sp. TaxID=2699749 RepID=A0A847G515_9CHLR)

HSP 1 Score: 57.8 bits (138), Expect = 1.840e-8
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0
Query:    4 LKQYVLKQRVFYVLIHTGRRHDAELADEDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 65
            L++YV    ++YVL+H    +  E A    S  VIL A+GVS  TGNLVG +  Q CHN CD
Sbjct:  154 LRKYVWDGHLYYVLLHEEPENHGEFA---FSEWVILFAVGVSKKTGNLVGAVTHQACHNFCD 212          
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Match: A0A518I9E7_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I9E7_9PLAN)

HSP 1 Score: 54.3 bits (129), Expect = 4.010e-7
Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    2 AALKQYVLKQRVFYVLIHTGRR-HDAELADEDMSSDVILLALGVSPATGNLVGVIAIQTCHNLCD 65
            A+L+  VL+  ++YV IH   + +D      +    VI+ A+GVS A+GNL+G+++ Q CHNLCD
Sbjct:  163 ASLRAAVLENHLYYVQIHAKPKVYDGS----EYREYVIVFAVGVSRASGNLIGMVSFQVCHNLCD 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1596.4372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L1F3_9PHAE3.510e-3495.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LG80_9PHAE2.010e-2478.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4Q6DF08_9PROT2.300e-1253.13Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
UPI001CC0B2F14.610e-1052.38hypothetical protein n=1 Tax=Gordonia bronchialis ... [more]
D0L311_GORB41.570e-952.38Uncharacterized protein n=1 Tax=Gordonia bronchial... [more]
A0A1X6NUI1_PORUM1.640e-946.15Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A847G515_9CHLR1.840e-846.77Uncharacterized protein n=1 Tax=Leptolinea sp. Tax... [more]
A0A518I9E7_9PLAN4.010e-741.54Uncharacterized protein n=1 Tax=Gimesia fumaroli T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1596contigEcto-sp13_S_contig1596:110..307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1596.4372.1mRNA_Ecto-sp13_S_contig1596.4372.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1596 110..307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1596.4372.1 ID=prot_Ecto-sp13_S_contig1596.4372.1|Name=mRNA_Ecto-sp13_S_contig1596.4372.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=66bp
LAALKQYVLKQRVFYVLIHTGRRHDAELADEDMSSDVILLALGVSPATGN
LVGVIAIQTCHNLCD*
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